Oncorhynchus tshawytscha (Chinook salmon): 112248409
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Entry
112248409 CDS
T05605
Name
(RefSeq) F-box-like/WD repeat-containing protein TBL1XR1 isoform X1
KO
K04508
transducin (beta)-like 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
112248409
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112248409
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
112248409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
eIF2A
LisH
RMC1_N
WD40_like
Coatomer_WDAD
PD40
Motif
Other DBs
NCBI-GeneID:
112248409
NCBI-ProteinID:
XP_024273173
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All DBs
Position
LG01:complement(26338119..26382179)
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AA seq
524 aa
AA seq
DB search
MSISSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGALVPPAALISIIQKGLQYV
EAEVSINEDGTLFDGRPIESLSLIDAVMPDVVQTRQQAYRDKLAQQQAAQAPPATTTNLT
ANAKNGENTANGEENGAHTLANLAHADEVLSVCHTDNHVDMMEVDGNVAIPQNKALVLRG
HESEVFICAWNPVSDLLASGSGDSTARIWNLSDSSSTQLVLRHCIREGGQDVPSNKDVTS
LDWNSEGTLLATGSYDGFARIWTKDGDLASTLGQHKGPIFALKWNKKGNFILSAGVDKTT
IIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHVCKLGQDRPIKTFQGHTN
EVNAIKWDPTGNLLASCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSPTGPGTNNPN
ANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPVYSVAFSPDGRHLASGSFDKCVHIWN
TQTGALVHSYRGTGGIFEVCWNAAGDKVGASASDGSVCVLDLRK
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgagcataagcagtgatgaggtcaactttcttgtgtacagatacctacaggagtcagga
ttttcccactcagccttcacgtttggcatagagagccacatcagccagtccaacatcaat
ggagccctggtgccccctgctgccctcatctccatcatacagaaaggcctgcagtacgtg
gaggccgaagtcagcattaatgaggacggtacgctgttcgacggacggccgatcgagtcc
ctgtcgctcatcgacgcggtaatgccggatgtggtgcagacacggcagcaggcctaccga
gacaagctggcccagcagcaggcagcccaggcccccccggccaccaccaccaacttgacg
gccaatgccaagaacggagagaacacggccaacggcgaggagaacggagctcacacctta
gctaatcttgcacatgctgatgaggtactctctgtgtgccatacagacaaccacgtcgac
atgatggaggtggatgggaatgtggcgattccccagaacaaagccttggtgctccgaggt
cacgagtcagaagtgttcatctgcgcctggaaccctgtctccgacctgcttgcctccggg
tctggggactcgacggcacggatctggaacctgagtgacagcagctccacacagcttgta
ctgaggcactgcatacgggagggaggtcaggacgtccccagcaacaaagacgtcacatca
ttagactggaacagtgagggtacgttactagcaaccggctcatatgatggatttgccagg
atatggacaaaggatggtgatcttgcaagtaccctgggtcaacacaaaggtcccattttt
gcattaaaatggaacaaaaaaggaaactttattcttagtgccggagtagataagactaca
atcatatgggatgctcacacaggagaagcaaagcagcagttcccgttccattcagcacct
gctctggatgtggactggcagagcaacaacacgtttgcctcctgcagtacagacatgtgc
atccacgtgtgtaagcttggccaagacaggcctatcaagacattccaaggacacacaaat
gaagtgaatgcaatcaaatgggatccaaccggtaacctgctagcctcttgctcagatgac
atgacgctgaagatctggagtatgaaacaggacacatgcgttcatgatctgcaagctcac
agcaaagagatctacactatcaaatggagccccaccggtcctggaaccaacaaccccaat
gccaatctgatgcttgccagcgcgtcctttgattcgacggtgcggctgtgggatgtggac
cgaggcatctgcatccacacgttaaccaaacaccaggagcctgtctacagtgtggccttc
agcccagacggcaggcatctggccagcggctccttcgacaagtgtgttcacatctggaac
acgcagactggcgctttagtccatagttaccgggggaccggggggatctttgaagtttgc
tggaatgcagcaggtgacaaagtgggagcaagtgcatcagatggatctgtttgtgtatta
gatctgcggaaataa
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