Oncorhynchus tshawytscha (Chinook salmon): 112248448
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Entry
112248448 CDS
T05605
Name
(RefSeq) neurofilament light polypeptide isoform X1
KO
K04572
neurofilament light polypeptide
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
otw01009
]
112248448
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112248448
Protein phosphatases and associated proteins [BR:
otw01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112248448
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
112248448
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Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
Tropomyosin
TPR_MLP1_2
CdvA
Dimer_Tnp_hAT
Phlebovirus_NSM
Motif
Other DBs
NCBI-GeneID:
112248448
NCBI-ProteinID:
XP_024273246
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All DBs
Position
LG04:complement(27205315..27209787)
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AA seq
569 aa
AA seq
DB search
MSSIAYDPYFPSSSHKRRVMLRSGGYGDSAGGMASRSVYSSHSAPLSYHGSSRLHYPTYS
RSSSMLLSTPRSAAAAELDISQAVQVSTEFKAVRTQEKAQLQELNDRFASFIERVHELEQ
QNKVLDAELLILRQRHGEPSHLRSLYEHEIRQLRAAVEEARDEKQAAQNHRDQMEEVLQS
LQGRYEEEVVSREEVEGQLMDARKGADEAALGRAELEKRTETLLDELAFLKRLHEGEIAE
LQAQVQYNAQVSVEMEVAKPDLSSALRDIRVQYEKLAHRNLQSAEEWFRSKVSVMTEGTA
RNTDNIRNAKEDAGEYRRLIQTRNQEIEACRDRNQSLENQLQEVEEEQSAEIAALQESIG
QLEDELRTTKNEMAQYLKDYQDLLNVKMALDIEIAAYRKLLEGEENRFSAVGPGAMSSVY
SQSLCVAPSRNRPMFSMQSSLTSGAPYLRMYSSSFSSADEIIAASQAPPAESSPQEEEEE
GEKGDEEAKEEDVEEEKKAEDDNGDMKEEAEEEAKENGDDGGDENQEGRDGEEDGANETE
EGHDKGEEDESKKEVEVAEEKEKPKDKNI
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgagttccattgcttacgacccttactttccctcctcttcccacaagaggagggtgatg
ctgcgcagtggagggtatggagacagtgcaggagggatggcatccaggtcggtgtattcc
agccactctgcccccctctcataccatgggtcatcccgactgcattacccaacatacagc
cgtagctcctccatgctgctgtctacccccagatctgctgccgctgctgaactcgacatc
agccaggcggtgcaggtgagcactgagttcaaggccgtgcggacgcaggagaaagcccag
ctacaggagctgaatgaccgctttgccagtttcattgagcgtgtccacgagctggagcag
cagaacaaggtgctggatgctgaactgctgatcctcaggcagaggcatggcgagccctcc
cacctcaggtccctgtatgagcacgagatccgccagctccgtgctgctgtggaggaggcc
cgcgatgagaaacaggctgcccagaaccacagggaccagatggaggaggtgctacagagt
ctgcagggacgttatgaagaggaggtagtgagcagggaagaggtggaggggcaactgatg
gatgccaggaaaggggcggatgaggctgctttgggccgtgctgagctggagaagaggaca
gagacactgctggatgagctggccttcctgaaacgtctccacgagggggagatagctgag
ctgcaggcccaggtgcagtacaatgcccaggtgtccgtggagatggaggtggccaagcca
gacctgtcttcagccctccgagacatccgtgtccaatatgagaaactggcacatcgcaac
ctccagtcagccgaggaatggttccgcagcaaggtgagtgtgatgacagaaggcaccgcc
cgcaacacagacaacattcgcaatgccaaagaagatgccggggagtaccgccgcctgatt
caaacacggaaccaggagattgaagcctgccgtgataggaaccagtccctggagaatcag
ttacaggaggtagaagaggaacagagtgctgagattgcagccctacaggaatcaattggc
cagctggaggacgagttgaggacaaccaagaatgaaatggctcagtacctgaaggattat
caagacctcttgaatgttaagatggctctggacatcgagatcgcagcttacaggaagctg
cttgaaggggaggagaatcgcttcagtgcagtaggaccaggggcaatgtccagtgtctat
tcccaaagcctgtgtgttgccccatcccgcaaccgccccatgttttccatgcagtccagc
ctgacctctggtgccccctacctacgcatgtacagctcatcattctcctctgcagatgag
attatagctgctagtcaagcaccgcctgctgagtcaagtcctcaggaggaagaggaggaa
ggagagaagggagacgaggaagcaaaggaagaggatgttgaagaagagaaaaaagcagaa
gatgacaatggagatatgaaggaagaggcagaagaggaggctaaagaaaatggagacgat
ggaggagatgaaaaccaagaaggtagagatggagaggaggatggagccaatgaaacagaa
gaagggcatgataagggagaagaggatgaaagcaaaaaggaagtagaagtggcagaggaa
aaagagaagccaaaggacaaaaatatttaa
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