Oncorhynchus tshawytscha (Chinook salmon): 112248454
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Entry
112248454 CDS
T05605
Name
(RefSeq) leucine-rich repeat LGI family member 3
KO
K19999
leucine-rich repeat LGI family member 3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112248454
Membrane trafficking [BR:
otw04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
112248454
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Gene cluster
GFIT
Motif
Pfam:
EPTP
LRR_8
LRR_5
LRR_4
LRRCT
LRR_1
LRR_9
Motif
Other DBs
NCBI-GeneID:
112248454
NCBI-ProteinID:
XP_024273254
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Position
LG04:27440288..27453945
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AA seq
550 aa
AA seq
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MLDAGSRRVPEWLRLLAGLSLLLCLVGETGAKRVPKIPRCPVTCSCTKDSAFCVDTKAIP
KSFPPGIISLTMVNAAFTTIPEGAFSHLHLLQFLLLNSNTFTVVADDAFAGLAHLQYLFV
ENNDVQALSKHTFRGLKSLTHLSLSNNNLQFLPRELFKYLDILTDLDLRGNSFRCDCKIK
WLVDWMEKTNTSVPAIYCASPFEFQGRRIHDLTPRDFNCISADFAVYETFPFQSVSVESY
EFNNNQFVAFAQPDTGFCTLFVWDHVEMVFRMYHNITARSAVYCKPVVINNTLYMVVAQL
FGGSHIYKWEEDPQRFVKIQDIDTTRVRKPNFVETFQLDDEWYFAVADSSKAGSTSIYRW
NSNGFYSHQSLHPWHRDTHVEFLDVEGKQRLILSSASQPPVVYQWNRSLRQFAFHSQITE
TFDVQMVKHFWVRNVLYLCLTRFIGDSKILRWEGQRYVEIQTLPSRGSMAVYPFTVGPRQ
YLLLGSDFSFSRVYLWDDLTQRFQPFQELNMRAPRAFSLVSVDNKDMLLAASFKGNTLAY
QHLIVDLSAK
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgctggatgccggatcgagaagggtcccggaatggctgaggctgttggctggcctaagt
ctgcttctctgcctggtgggggagacaggggccaagagggtccccaaaatcccccgctgt
cctgtcacctgctcctgcaccaaagacagtgccttctgtgtggataccaaggctatcccc
aagagctttccccctgggatcatctctctgacaatggtgaatgcagccttcactacaatc
ccagagggagccttctcccacctgcacctgctgcagttccttcttctgaactccaatacc
ttcactgtggtggctgatgatgcctttgcaggtctggcacacctgcagtacctatttgta
gagaacaatgacgtccaagccctgtcaaagcataccttcagagggcttaaatccttgact
cacctttctctgtcaaataataacctgcagttccttccacgagaactcttcaaatatctt
gatattttgacagacttagacctgcggggtaactcattccgctgtgactgtaaaatcaag
tggctggtggactggatggagaagaccaacacctctgtccctgccatctactgtgccagc
ccatttgagttccaaggtcgcagaatccatgatctcaccccacgagacttcaactgtatc
agtgcagactttgccgtttatgagacttttcccttccagtctgtgtcagtggagtcctat
gaattcaacaacaatcagtttgtggccttcgcccagcctgatactgggttctgtacactg
tttgtatgggatcatgtggaaatggtcttccggatgtaccataatataacagctcgctcc
gctgtctactgcaagcctgtggtcataaacaacactctttacatggttgtggctcaactt
tttggaggatcccacatctacaagtgggaagaggacccacagcgatttgtgaagattcag
gacattgacaccacacgtgtgaggaaacccaactttgttgagaccttccagctggatgat
gagtggtactttgccgtggcagacagttccaaggcaggctctacgagcatataccgctgg
aacagcaacggtttctactcccaccaatcccttcatccctggcatcgtgacacccatgtg
gagttcctagatgtggaagggaagcagcgtctcattctctccagtgcctctcagccccca
gtggtttaccagtggaaccgcagcctgcgccagtttgcctttcattcccaaatcactgag
actttcgacgtgcagatggtcaagcatttctgggtgcgcaacgttctctacctttgcctt
acacgcttcattggtgactccaagattctccgatgggaggggcagcgctatgttgagatt
cagaccctgccctcacgtggctccatggctgtgtatccattcactgtgggcccccgccag
tatcttctcctagggagtgatttctccttctctcgagtttacctgtgggatgacctcacc
cagcgcttccagcccttccaggagctcaacatgagagcaccccgggccttcagcttggtg
tctgtggacaacaaagacatgctgctggcagccagctttaaaggcaacaccctagcctac
cagcacctaatagtggatctcagtgccaaatag
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