Oncorhynchus tshawytscha (Chinook salmon): 112248524
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Entry
112248524 CDS
T05605
Symbol
si:ch211-225b11.1
Name
(RefSeq) sodium- and chloride-dependent GABA transporter ine isoform X1
KO
K05039
solute carrier family 6 (neurotransmitter transporter, taurine) member 6
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
otw02000
]
112248524 (si:ch211-225b11.1)
Transporters [BR:
otw02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
112248524 (si:ch211-225b11.1)
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Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
112248524
NCBI-ProteinID:
XP_024273399
UniProt:
A0A8C8H4L2
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Position
LG04:31523237..31579441
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AA seq
608 aa
AA seq
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MGVGSEKTSSTTKGVYKEETDIALKAPLNVNAMLSKKVGHATAERATWGRRLEFVLASVG
YAVGLGNVWRFPYLCYRSGGGAFLIPYFLMLFLCGIPLLFMEFAIGQYTRLGPVHALATI
CPLFKGVGIATVVISFVLCTYYNVLMSWALYYFFNSFRAIFPWQSCNNTWNAVGNCSSGF
PGNATHLQSASQQYFDHRVLEITNGIEDAGGLRWELFGILILAWVIVYLCIFKGVKSTGK
VVYFTATFPYFILFALLINNVQLPGAKDGMLYFLKPKWSKLLEVQVWVNAAAQVFNSIGI
GFGSMISMASYNKFNNNILRDTLIVSLANSATSILAGFVIFSAIGYMAHVHNLPVDNIAT
DGPGLVFVVYPEVFSTMPLPQLWAPLFFFMLLCLGLDSQFAMVEVAVTSIIDGFGPKVLR
VLKRQEVIVLAVCVMGFLLGIPHITKGGMYVFQLMDHYTAVVSLMFLSFFEVIAVCWVFG
LRRMTIMIKRMLGKAPNIYFRSCWMVFSPVLVLCILISSIIQYTPARYGKSYTYPVWAEV
VGWGISLVSIVWIPLGALQEICRNKGSLLQRVKTAVTPTIELDPVNPLPEEQSEDTPESV
FLSIITPL
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgggagtggggtccgaaaagacatcatccaccaccaagggagtctacaaagaggagact
gatattgctttgaaagcacctttaaacgtgaatgctatgttatcaaagaaagtggggcac
gcgacagcagaaagagccacctggggtcgccgccttgagttcgtcctcgcgtcagtgggg
tacgcggtgggacttgggaacgtgtggcgctttccatacctctgctacaggagcggtgga
ggtgcctttctcattccttactttctcatgctgtttctgtgtggcatcccccttctcttc
atggagtttgctattgggcagtacacccgtctgggaccggtgcatgctctagccacaatc
tgccccttgttcaaaggtgtgggcattgcaacagtcgtgatctcctttgtgctctgcacc
tactacaacgttcttatgagctgggcactctactacttcttcaactcattccgagccatc
ttcccctggcagtcctgcaacaacacctggaatgccgtgggtaactgctccagcggtttc
cctggaaacgccacccacctgcaatcagccagtcagcagtactttgatcacagggttctg
gagataaccaatggtattgaggatgcaggaggactacgctgggagctgtttggcatcctc
atcctggcctgggtcatagtctacttgtgcatcttcaaaggcgtcaaatcaactggcaag
gttgtttatttcacagccacgttcccatactttattctgttcgccttgctcatcaacaat
gtccagcttcccggggccaaggatgggatgctctacttcctgaagcctaagtggagcaag
ctgcttgaagttcaggtgtgggttaacgctgcagcccaggtattcaactccattggaatt
ggatttggctccatgatctccatggccagttacaacaagttcaacaataacatccttagg
gacacattgattgtctctttagctaactcggccaccagtatcctggctggctttgtgata
ttctcagcaatcggctacatggctcatgtccacaacctcccagtggacaacatcgccaca
gatggtcctggcttggtgtttgtggtgtatccagaggtcttctccactatgcctctgcca
cagttgtgggctcctctgttcttcttcatgcttctgtgcctgggactggacagccagttt
gccatggtggaggtggcggtgacgtccataatagatggcttcggccctaaggtgctgcgt
gtcctgaagagacaggaggtcatcgttctggccgtctgtgttatgggcttccttctaggc
attcctcacatcactaaggggggcatgtatgtgttccagctgatggaccactacactgct
gtggtgtcgctcatgttcctgtccttctttgaagtcatcgctgtctgctgggttttcgga
ctgcgtcggatgaccatcatgatcaagagaatgttgggaaaggctcccaacatctatttc
cgctcctgctggatggtcttctcccctgtgctggtcctgtgcattctgatctccagcatc
atccagtacacgccagctcgctatgggaagtcatacacataccctgtctgggcagaggtg
gtgggctggggaatctccctggtctccatcgtgtggatcccactgggagccctgcaagag
atctgcagaaataagggctcactgctgcagagagtaaaaacagctgtgactcctacaata
gagttggatcctgtcaaccctctgccagaggagcagagcgaagacacaccagagtctgtt
ttcttgtctatcatcactcctctgtaa
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