KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112248533
Entry
112248533         CDS       T05605                                 
Symbol
rabggta
Name
(RefSeq) geranylgeranyl transferase type-2 subunit alpha
  KO
K14050  geranylgeranyl transferase type-2 subunit alpha [EC:2.5.1.60]
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:otw00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:otw01006]
    112248533 (rabggta)
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:otw04131]
    112248533 (rabggta)
Enzymes [BR:otw01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.60  protein geranylgeranyltransferase type II
     112248533 (rabggta)
Prenyltransferases [BR:otw01006]
 Protein prenylation
  Rab geranylgeranyltransferase
   112248533 (rabggta)
Membrane trafficking [BR:otw04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    112248533 (rabggta)
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
    112248533 (rabggta)
SSDB
Motif
Pfam: RabGGT_insert PPTA LRR_4 LRR_9 LRR_8 CAAD
Other DBs
NCBI-GeneID: 112248533
NCBI-ProteinID: XP_024273427
LinkDB
Position
LG01:complement(26782961..26790118)
AA seq 583 aa
MHGRVKLKSTAQQEEEKRKEREKKLKIYVAGRDAIFTKRLEGVLDDEALQLTQQLLSSNP
DFATLWNYRREILLHLETVREEDDVQKMYEAELLFLESCLKVNPKSYGSWHHRGWVSARL
PRPDWARELGLCDRCLSLDDRNFHCWDYRRMVVKMSGVPVDQELQFTDRLIGSNFSNYSS
WHYRSTLLPLLHPESPDPPSPCHQHSHSSPPPSPQTHSHRVCEEQLLKEYELVQNAFFTD
PNDQSAWFYYRWLLGRAEREEMISCVFVSREEERVAVAFSRPVNASSSGLMLVLDGQPQR
VEWRSVHPHFRHSPVWICALPPGTISDIINEHNLTVHWTEKHTHRDCALYTGRSESWCRD
SATDQELFRSELSVEKTSVLQSELQSCNQLLELEPQNKWCLLTIVLLMRALDPLGYERET
LSHFQTLKEVDSMRSAYYGDLCSKFMIENTILKMEYAEVRVFSLSDKNLTMLCHLDQLLL
VTHINLSCNQLLRLPPQFAMLQCLEVLEADDNAIENLDGLYYLPKLQEVSLKNNQISKLS
DLQLLTSCPKLTCLDLRGNPVTQIANIQSELTELLPSVTDLLI
NT seq 1752 nt   +upstreamnt  +downstreamnt
atgcatggacgggtaaagctgaagtccaccgcccagcaggaagaagagaagagaaaagag
agagagaagaaactcaagatttatgtggcaggacgagatgctatctttactaagaggttg
gagggtgtgttggatgatgaggcccttcagttgacccagcagctgctatcctccaatcct
gattttgccactctctggaactacaggagagagatcctgttgcacctggagactgtacgt
gaggaggatgacgtgcagaagatgtatgaggctgagttgttgtttctggagtcgtgtttg
aaggtgaatcccaagtcgtacggcagctggcaccaccgaggctgggtttcagcacgcctg
cccagacctgactgggccagagaactgggcctgtgtgaccgctgcctcagtctggatgac
cgcaactttcactgctgggactatcgccggatggtggtgaagatgtctggtgtgcctgtg
gaccaggagctgcagttcactgaccgtctcatcggctccaacttctccaattactccagc
tggcactaccggagcaccctccttcccctactccaccctgagtcccccgaccccccctcg
ccctgccaccagcactcccactcctcccctccaccctcccctcagacacactctcatcgc
gtctgtgaggaacagctgctcaaagagtatgagctcgtacagaatgccttcttcactgac
cccaatgaccagagtgcctggttctactacaggtggttgctaggcagagcggagcgagag
gagatgataagctgtgtgtttgtcagccgtgaggaggagagagtggctgtggccttctcc
agacctgtcaatgcttcatctagtggtctgatgctggtgttggatggtcagccccagcgt
gtggaatggaggagtgtacatcctcacttcagacacagccctgtctggatctgtgcgctt
cctcctggcactatcagtgacatcattaatgaacacaacctgaccgtgcactggactgag
aaacacactcacagagactgtgctctgtacacaggtcggtctgagagttggtgcagggat
tctgccactgaccaggagctcttcaggagtgagctgtctgtggaaaagacctctgtgttg
cagtctgaactacagtcctgcaaccaacttctggagctggagccccagaacaagtggtgc
ttgctgaccatcgttctgcttatgagggcgctagatcccctaggttacgagcgagagacc
ctttctcacttccagactcttaaagaggtggactccatgcgctctgcatattacggtgac
ctgtgcagtaagttcatgatcgagaacaccattctcaagatggagtacgctgaggtccgg
gtcttcagtctctctgacaagaacctgaccatgttatgtcacctggaccagctgctattg
gtcactcatatcaatctatcatgcaatcagctgcttaggctgcctcctcagtttgccatg
ctgcagtgcctcgaggtattggaggctgatgacaacgctattgagaatttggatggactg
tactatctccccaagttgcaagaagtgtccttgaagaacaaccaaatatccaaactctct
gaccttcaactcctgacttcctgcccaaagctgacctgccttgatctccgtggcaaccct
gtcacccagattgcaaacattcaatctgagttgactgagctactgccctcagtcactgac
ctcctgatctga

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