Oncorhynchus tshawytscha (Chinook salmon): 112248539
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Entry
112248539 CDS
T05605
Name
(RefSeq) coronin-1C-A
KO
K13886
coronin-1B/1C/6
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112248539
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
112248539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1899
WD40_4
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
EIF3I
Beta-prop_EML
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_WDR35_TULP_N
NBCH_WD40
Beta-prop_IFT140_1st
Trimer_CC
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
WD40_RFWD3
MetOD2
Beta-prop_DCAF12
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
112248539
NCBI-ProteinID:
XP_024273432
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All DBs
Position
LG04:complement(31852952..31909286)
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AA seq
474 aa
AA seq
DB search
MFRRVVRASKFRHVFGQALKNDQCYDDIRVSRVTWDSSFCAVNPKFVAIIIEASGGGAFL
VLPLHKSGRIDKAYPTVCGHTGPVLDIDWCPHNDQVIASGSEDCTVMVWQIPENGLVTGL
SEPVVVLEGHSKRVGIITWHPTARNVLLSAGCDNLVIIWNVGTGEAMIQLEDMHPDVIFS
ACWNRNGSLICTACKDKTIRVIDPRKEEIVGEKEKAHEGARPMRAIFLSDGNVFTTGFSR
MSERQLALWNPQAMDEAISVHEMDTSNGVLLPFYDPDTSVVYLCGKGDSSIRYFEITDEA
PFVHYLSTFTTKEPQRGMGYMPKRGLDVNKCEIARFYKLHERKCEPIIMTVPRKSDLFQD
DLYPDTAGPECAIEAEDWFEGRNGEPILISLKNGYVPGKNRDLKVVKKNILDNKLSKNAE
NTGTVNKSASSTPSIKNEGKLEEILKEIKSLKDLVSSQEKRIIQLEEQMSKIAI
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgttcaggcgagttgtacgagcgagcaaattccgtcatgtcttcggccaggcgctgaag
aatgaccagtgctacgacgacatcagagtatcgagggtcacatgggacagctcgttctgt
gccgtcaatcccaagtttgtcgctatcatcatagaggccagcggaggcggggccttcctg
gtcctccctcttcacaagtcgggccgcattgacaaggcctaccccacagtgtgtggtcac
acaggccctgtactggacatcgactggtgcccccacaatgaccaggtcatcgccagcggc
tcggaggactgcacggtcatggtgtggcagatccctgagaacgggctggttaccggcttg
tctgagcctgtggtggtcctggagggacactccaaaagggttggcatcatcacatggcac
cccacggcacgcaacgtcctgctcagtgctggctgtgacaacctggtcatcatctggaac
gtggggacgggcgaggccatgatccagttggaggacatgcaccctgacgtcatcttcagc
gcctgctggaaccgcaacggcagcctcatctgcaccgcctgcaaggacaagaccatccgc
gtcatcgacccccgcaaggaagagattgtaggggagaaggagaaggcacacgagggggcg
cggcccatgagggccatcttcctgtcggacgggaacgtgttcaccacaggcttcagccgt
atgagtgagagacagctagccctgtggaacccgcaagccatggatgaggcgatctcagtg
catgagatggacaccagcaatggagtcctcttgcccttctatgacccagatacctctgtg
gtttatctgtgtggtaagggtgacagcagcattcgctactttgagatcacggacgaagcc
ccatttgtccactacctcagcaccttcaccaccaaggagccccagaggggaatgggatac
atgcccaagagaggcctggacgtcaacaagtgtgagatcgccaggttttataaactgcac
gaaaggaagtgtgaaccgatcatcatgactgtgccaagaaagtctgacctgttccaggac
gacctgtacccagacacggcaggaccagaatgtgccattgaggcggaggattggttcgag
gggaggaacggcgagcccatcctcatttccttgaagaacggttacgtccctggcaagaac
cgcgacctcaaggtggtcaagaagaacatcctggacaacaagctgagcaagaatgcggag
aacacgggcacagtcaacaagtctgcctcatccactccatccataaaaaacgaaggcaag
ctggaagagatcttgaaagaaatcaaatccctcaaggacctggtcagcagtcaggagaag
cgaatcatccaactcgaggagcagatgtccaagattgccatttaa
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