Oncorhynchus tshawytscha (Chinook salmon): 112248544
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Entry
112248544 CDS
T05605
Name
(RefSeq) serine/arginine-rich splicing factor 9
KO
K21123
serine/arginine-rich splicing factor 9
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03040
Spliceosome
otw05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112248544
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
112248544
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otw03041
]
112248544
Spliceosome [BR:
otw03041
]
Common components
Common spliceosomal components
SR proteins
112248544
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_7
RRM_occluded
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
112248544
NCBI-ProteinID:
XP_024273437
LinkDB
All DBs
Position
LG04:32050129..32065755
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AA seq
258 aa
AA seq
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MADGRIYVGNLPADVQERDIEDIFFKYGKIRDIELKNNRGTIPFAFVRFEDPRDAEDAVY
GRNGYGFGDCKLRVEHPRSASSKFNGSMGGSGRGSGDGGPGGPKGRFGPPTRRSEFRVIV
TGLPPTGSWQDLKDHMREAGDVCFTDVQRDGEGVVEFLRREDMEYAMRRLDRTEFRSHQG
ETSSIRVHGEMGGSRGRSRSRSRSRGRYSPAYQGRGSPPPRYQSPPARRLSRHSPPPRRP
SAAHRSPSSRSPPPRHYR
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atggcagatggcaggatctacgtgggtaaccttccagctgatgtgcaagagagggacatt
gaggatatattcttcaaatatggcaaaatcagagacattgagttgaagaacaacagaggc
actattccctttgcctttgtgcgctttgaagatccacgggatgccgaggatgcagtctat
gggaggaatggttatggatttggagactgcaagcttcgcgttgagcaccctcgctctgcc
tcctctaaattcaacgggtctatgggtggtagtggtcgcgggagtggggacggaggtccc
ggtggtcctaaagggaggtttgggcctcctactcggagatcagagttcagagttattgtg
actggcctgcctccgactgggagctggcaagacttgaaagatcacatgagggaggctgga
gatgtttgtttcacagatgttcagcgggatggtgaaggggtggtggagttcctgcgcaga
gaggacatggagtatgccatgcggcgcctggacaggacagagttcagatcacaccagggg
gagacttcatctatccgagtccatggagagatggggggcagcagaggacgctcgcggtcc
cgttccagatccaggggacggtactcacccgcttatcaaggtcgcggctctccaccccct
cgttatcagtcgccccctgctcgtagattgtctcgccatagcccccctccacgtcgcccc
tctgcagcacaccgtagcccatcaagccgcagcccaccccctcgtcactaccgatag
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