Oncorhynchus tshawytscha (Chinook salmon): 112248573
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Entry
112248573 CDS
T05605
Symbol
cdk7
Name
(RefSeq) cyclin-dependent kinase 7
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03022
Basal transcription factors
otw03420
Nucleotide excision repair
otw04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
112248573 (cdk7)
09124 Replication and repair
03420 Nucleotide excision repair
112248573 (cdk7)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
112248573 (cdk7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
otw01001
]
112248573 (cdk7)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
otw03021
]
112248573 (cdk7)
03019 Messenger RNA biogenesis [BR:
otw03019
]
112248573 (cdk7)
03400 DNA repair and recombination proteins [BR:
otw03400
]
112248573 (cdk7)
Enzymes [BR:
otw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
112248573 (cdk7)
2.7.11.23 [RNA-polymerase]-subunit kinase
112248573 (cdk7)
Protein kinases [BR:
otw01001
]
Serine/threonine kinases: CMGC group
CDK family
112248573 (cdk7)
Transcription machinery [BR:
otw03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
112248573 (cdk7)
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
112248573 (cdk7)
DNA repair and recombination proteins [BR:
otw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
112248573 (cdk7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
Seadorna_VP7
ABC1
Kinase-like
Haspin_kinase
APH
Motif
Other DBs
NCBI-GeneID:
112248573
NCBI-ProteinID:
XP_024273486
LinkDB
All DBs
Position
LG04:32832099..32838770
Genome browser
AA seq
345 aa
AA seq
DB search
MALDVKSRAKRYEKLDFLGEGQFATVYKARDKTNDTIVAIKKIKVGHRTEAKDGINRTAL
REIKLLQELSHPNIIGLLDAFGHKSNISLVFDYMETDLEVIIKDTSLVLTPANIKAFIVM
TLQGLEYMHHHWVLHRDLKPNNLLLDENGVLKLADFGLAKAFGSPNRVYTHQVVTRWYRS
PELLFGARMYGVGVDMWAVGCILAELLLRLPFLAGDSDLDQLSKIFEALGTPTDDTWPGM
SSLPDYVSFKLFPGTPLEHIFSAAGDDLLELLQGLFTFNPSTRLTATQALKMRYFSNRPG
PTPGHQLPRPNSSAEALKEKENLTIGIKRKRDGLETSTIKKKLIL
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttgatgtaaagtcccgagcaaaaagatatgaaaaactagattttctgggagag
ggtcagtttgccactgtttacaaagccagggacaagaccaacgacacaatagttgccatc
aagaagatcaaagttggacacagaacagaggctaaagatggcatcaacagaacagcccta
cgagagattaaactactgcaggagttaagtcacccaaacattattgggctgcttgatgca
tttgggcacaaatctaacatcagcttggtgtttgactacatggagacagatctggaggtg
atcatcaaagataccagtctggttttgactccagccaacatcaaagccttcatagtgatg
actctacagggcctggagtacatgcaccaccactgggttctgcacagggatctgaagccc
aataacctgctgctggatgagaatggtgtgttgaagctggctgattttggtttagctaaa
gcattcggcagccctaacagagtctacactcaccaggtagtcaccaggtggtatcgttct
ccagagttgttgttcggtgccaggatgtatggggtgggcgtcgacatgtgggctgtgggc
tgcatccttgcagagctcctcttaaggttacccttcctagctggagactcagatctggac
cagctgagtaagatctttgaagctctggggactcctacagatgacacctggcctgggatg
agtagtctacctgactatgtgtcatttaagttgtttcctggtactcctctggaacacatc
ttcagtgctgcaggagacgacctcttagagctactacagggtctattcaccttcaaccct
tccacacgccttacagctacacaggctctaaagatgaggtacttcagtaacagaccaggt
ccgacccccgggcaccagctgccccggcccaactcatcagcagaggctctcaaagagaag
gagaacctcaccatcggaatcaagaggaaacgagacggactggagacgagcaccataaag
aagaaactgatactgtga
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