Oncorhynchus tshawytscha (Chinook salmon): 112248590
Help
Entry
112248590 CDS
T05605
Symbol
sv2ca
Name
(RefSeq) synaptic vesicle glycoprotein 2Ca
KO
K06258
MFS transporter, VNT family, synaptic vesicle glycoprotein 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112248590 (sv2ca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
otw02000
]
112248590 (sv2ca)
Transporters [BR:
otw02000
]
Major facilitator superfamily (MFS)
Protein transporters
Vesicular neurotransmitter transporter (VNT) [TC:
2.A.1.22
]
112248590 (sv2ca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
LD_SV2
Sugar_tr
MFS_2
Pentapeptide_3
Pentapeptide_4
Pentapeptide
DUF6077
Motif
Other DBs
NCBI-GeneID:
112248590
NCBI-ProteinID:
XP_024273508
UniProt:
A0A8C8D6Q7
LinkDB
All DBs
Position
LG04:33337356..33368660
Genome browser
AA seq
737 aa
AA seq
DB search
MDDSYESRTSLVKGAKDIVKEAKRHAVKKVNKVVDSTTDEYSQRKYSRFEDEVDEGDDFY
RNPPRQDGGYNDNDQASDASDATEGHDDEDEIYEGEYQGIPAAGDRRAREGQVALGQPVT
DSLKDRKELEQERQADEEELAQQYELIIQECGHGRFQWQLFLVLGLALMSDGVEVFVVGF
VLPSAETDMCALGGSNSRSGWLGSIVYLGMMVGAFFWGGMSDKVGRRQCLLICMCVNGFF
AFLSSFVQGYGIFLLCRVIAGFGTGGVVPIVFSLFAEVLSREKRGEHLSWLCMFWMIGEI
YASAMAWAIIPHYGWSFSMGSAYQFHSWRVFVVVCALPCVCAVVALTFMPESPRFYLEVG
KHDEAWMILKQIHDTNMRARGQPEKVFTVNRIKIPKHLDELVEIKSESGNPVSKALFRSK
TELCGIWVNFMKCFDYPLKESTIKLAIVWFTLSFGYYGLSVWFPDVIKHLQADDYASKVK
IHSNERIEDFTFNFTMENQIHTNGVFINDRFVNMKLKSITFIDSTFRNCYFDDVTSVGSY
FRNCTFIEAFFYNTDIDDSKLIDDTEVINSTFHHNKTGCQMTFDDDYSAYWVYFINFLGT
LAVLPGNIVSALLMDKIGRLSMLGGSMVLSGISCFFLWFGTSESMMIFMLCLYNGLSISA
WNSLDVVTTESFPTDRRGTGFGFCNALCKLAAVLGNLIFGSLVGITKSIPILLASSVLVC
GGLVGLRLPDTRANVLM
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atggacgacagctacgaaagcaggacttccttagtgaagggggccaaggacatcgtcaag
gaggccaagcggcacgctgtgaaaaaggtcaacaaggtcgtggacagcaccacagacgag
tactcccagcgcaaatacagccgtttcgaggacgaggtggacgagggagacgacttttac
cgtaaccctcccaggcaggacggaggctacaatgacaacgaccaggccagtgatgccagc
gacgccacagagggccatgatgacgaagatgagatctacgaaggggagtaccagggaatc
ccagcggccggagacaggcgggccagggaggggcaggtggctctggggcagcccgtcaca
gacagcctgaaggaccgtaaggagctggagcaggagaggcaggcggacgaggaggaactg
gcccagcagtatgagctgatcatccaggagtgtggccacggcaggttccaatggcagctg
ttcctggtgctgggcctggccctcatgtcggatggggtggaggtgttcgtggtggggttt
gttctacccagcgccgagacggacatgtgtgctctgggtggctccaactccagatctgga
tggctaggcagtattgtgtacctggggatgatggtgggggcgttcttctgggggggcatg
tcggacaaggtgggccgcagacagtgtctgctcatctgcatgtgtgtgaacggcttcttc
gccttcctctcctccttcgttcagggttatggcatcttcctactctgccgcgtgatcgca
ggctttggaacagggggagttgtacccatcgtcttctccttatttgcggaggtgctgtcc
agagagaagagaggggagcacctgagctggctctgcatgttctggatgattggagagatc
tatgcttcagccatggcctgggccattataccacactacggctggagtttcagtatgggt
tctgcctaccagttccacagttggagagtgtttgtggtcgtctgcgccctgccctgcgtt
tgtgctgttgtggctctcactttcatgcccgagagccccaggttttacctggaggtgggg
aagcacgacgaggcatggatgatcctcaagcagatccatgacaccaacatgcgagcgcgt
gggcagccggagaaagtcttcaccgtgaacagaatcaagatccccaagcatttggatgag
ctggtggagattaaatcagagtcggggaacccagtctccaaggccctcttcaggtccaag
accgagctatgtgggatctgggttaactttatgaagtgtttcgactaccctctgaaagaa
agcactatcaagctagctattgtttggtttactctgtcatttgggtactacggcctgtct
gtgtggttccctgatgtcatcaagcacctccaggcagatgactacgcctccaaggtgaag
atccacagcaacgaacgcatcgaggacttcaccttcaatttcaccatggagaaccagatc
cacaccaatggtgtcttcatcaacgacagatttgttaatatgaagttgaagtccatcacc
ttcattgactccaccttccgtaactgctactttgacgacgtgacgtcggtgggatcctac
ttccggaactgtaccttcatcgaggcgttcttctacaacactgacatcgatgactccaaa
ctgatagatgacacagaggtgatcaacagcacgtttcaccacaacaagacgggctgtcag
atgacatttgatgacgactacagcgcctactgggtctacttcatcaacttccttggaact
ctggctgttctgcccggcaacatcgtctcggcactgctcatggataaaatcggacgcctt
tccatgttaggtggctccatggttctgtcagggatcagttgtttcttcctgtggttcggc
accagtgagtcgatgatgatcttcatgctgtgcctttacaacggcctgagcatatcagcc
tggaactcactggacgtggtcaccacagagtccttccctacagacagaagagggacaggt
tttgggttctgtaatgctttgtgtaagctggctgcagtgttgggaaacctgatctttggt
tctctggttggcatcaccaagtccatccccatcctcctggcctcatctgtgctggtgtgt
ggaggcctggtggggctccggctgcctgataccagggccaacgtactgatgtag
DBGET
integrated database retrieval system
