Oncorhynchus tshawytscha (Chinook salmon): 112248599
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Entry
112248599 CDS
T05605
Name
(RefSeq) ubiquitin recognition factor in ER-associated degradation protein 1
KO
K14016
ubiquitin fusion degradation protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112248599
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
otw03009
]
112248599
Ribosome biogenesis [BR:
otw03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
112248599
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UFD1_N1
UFD1_N2
CDC48_2
Motif
Other DBs
NCBI-GeneID:
112248599
NCBI-ProteinID:
XP_024273525
LinkDB
All DBs
Position
LG04:33667654..33671522
Genome browser
AA seq
309 aa
AA seq
DB search
MFSFNMFDHPIPRAFQNRFSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLN
ITYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLMVA
TYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDKAV
SIIECDMNVDFDAPLGYKEPERRYKAPEEPTEEEGDPSTWTDMDMRFRAFTGSGNRLDGK
KKGIEPSPVPIDPSDIKRGIPNYEYKVGRITFIRNSRPQPRKTTEDEDSEFIAFSGEGQS
LRKKGGRKP
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgttttccttcaacatgtttgatcacccgatcccacgggctttccaaaaccgcttctcc
actcaataccgctgctactctgtgtccatgctggcgggtcccaacgaccggtcggatgtg
gagaaaggaggaaaaattataatgccgccatcagcacttgatcaactaagcagacttaac
attacctaccccatgttgttcaaactgaccaacaagaactcagacagaatgacacactgt
ggtgtcttggagtttgtagcagatgagggtatttgttacctgccacactggatgatgcaa
aatctcctgctggaggaagggggcctggtccaggtggagagtgttaacctcatggtggca
acatactccaagttccagcctcagagcccagacttcctggatatcactaaccccaaagca
gtgttggaaaatgccttgagaaactttgcctgcttaaccacaggagatgttattgcaatt
aactacaatgaaaagatctatgaactgcgagtgatggagactaagccagacaaggccgta
tctatcattgaatgtgatatgaatgtggactttgatgctccgttgggttacaaagaacca
gagagacgttacaaagcaccagaggagcccacagaagaggaaggagaccccagcacttgg
actgacatggacatgagattcagagccttcactggttcaggcaatcgtctggatggcaaa
aagaaaggcattgagcctagccccgtccccatcgatcccagtgacattaaaagagggatt
cctaactacgagtacaaggtcggaaggatcaccttcatcaggaactccaggcctcagccc
aggaaaacaacagaggatgaggattcagaattcatcgccttttctggtgagggacagtca
ctacgcaagaaaggtggcagaaagccttga
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