Oncorhynchus tshawytscha (Chinook salmon): 112248603
Help
Entry
112248603 CDS
T05605
Name
(RefSeq) DNA polymerase beta
KO
K02330
DNA polymerase beta [EC:
2.7.7.7
4.2.99.-]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
112248603
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
otw03400
]
112248603
Enzymes [BR:
otw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
112248603
DNA repair and recombination proteins [BR:
otw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
112248603
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
112248603
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
HHH_8
DNA_pol_lambd_f
HHH_5
Cactin_mid
HHH_2
NTP_transf_2
DUF4806
Cdd1
Motif
Other DBs
NCBI-GeneID:
112248603
NCBI-ProteinID:
XP_024273529
LinkDB
All DBs
Position
LG04:complement(33691953..33698876)
Genome browser
AA seq
336 aa
AA seq
DB search
MSKRKAPQESPNEGITDFLTELANYERNVNRAIHKYNAYRKAASVISKYPQKIKNGEEAK
KLDGVGKEIAKKIDEFLQTGTLKKLEKIRNDDTSSSINFLTRVTGIGPAAARKFFDEGVK
TLEDLKKIEHKLNHHQQIGLKYFEEFEKRIPRTEMTKMETLILQELELVDTEYIGTICGS
YRRGAESSGDIDILLTHPNYTSVDEKQPKLLHAVVEHFESIGFITDTLSKGDTKYMGVCQ
LQQKDEDEEEYLHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRTHALEKGFTLNEYTIR
PVGVTGMAGEPLMVDSEKDIFDYIQWKYREPKERSE
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaaggaaagcgccacaggaatccccaaacgagggaataacagacttccttacc
gaattggccaactatgagaggaatgtcaacagagctatacacaagtacaatgcctacagg
aaagcagcttcagtgatctccaagtacccccagaagatcaaaaatggggaagaggccaag
aaactggatggcgttggaaaagagatcgctaagaagatagatgagtttttacaaacagga
acacttaagaagttagaaaagattcgtaatgatgacaccagctcctccatcaatttcctt
accagagtcactggtattggtcctgctgctgccagaaagttctttgatgagggagtgaag
actctggaagatctgaagaaaatcgaacacaagctcaatcatcatcagcagattggactc
aagtactttgaggagtttgagaagaggattccacgaactgagatgacgaagatggagact
ctcattctgcaggagctggagttggtggatactgagtacattgggacaatctgtggaagc
tacaggagaggtgctgaatccagtggggatattgatatcttactgacccacccaaactac
acctctgtggatgagaaacagcccaaacttctccatgccgtggtggagcattttgaatcc
attgggttcattacagacacactgtccaaaggagacaccaaatacatgggagtctgccag
ctgcagcagaaggatgaagacgaggaggaatatcttcacagacgcattgatatcaggtta
attcctaaggaccagtattactgtggtgtgctgtatttcactggcagtgacatcttcaat
aagaacatgagaactcacgctctggagaaaggcttcaccctcaacgagtataccatccgt
ccagtgggggtcactggtatggccggggaacctctgatggtggacagtgagaaggatatc
tttgactacatccaatggaaatacagagagcctaaagaacgcagcgagtga
DBGET
integrated database retrieval system
