Oncorhynchus tshawytscha (Chinook salmon): 112248613
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Entry
112248613 CDS
T05605
Name
(RefSeq) protein zyg-11 homolog isoform X1
KO
K10350
Zyg-11 protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112248613
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
112248613
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZER1-like_2nd
LRR_Zer-1
LRR_4
ELMO_ARM
Arm_3
BAF250_C
Ax_dynein_light
Motif
Other DBs
NCBI-GeneID:
112248613
NCBI-ProteinID:
XP_024273546
LinkDB
All DBs
Position
LG01:complement(27086679..27109680)
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AA seq
754 aa
AA seq
DB search
MAFNSLNMDEASPASLTDLCLSYVSRNLERFCVKHADGSLCLRDSLLFPQELADQLLAKM
ATEGLLNDSTVGVFRSSEYLRLRRACIRTARISAEAFQRALCPHRLLELDAARVNADLTI
SDILHGLASNKHCRESLQRLVLTGLTMSSLEEPSCHCFSSLQGLRSLSLANVDFYDSGLA
DVCSLSRLESLDLSNTSVTNLNPLLGLRERLRSLTLHQLKRLEMSTAQLLAVIGQLEALQ
HLDISDDKQFTSDVARQLLGEPGILPALVSLDVSGRKQVTDAAVKAFVEERPGMTFVGLL
ATDAGFSNFLNGKGSLKVTGEANETQICEALRRYSEREGFVREALFHLFSLTHVMEKPRP
DILKLVVLGMKNHPATLNVQLAASACVFNLTKQDLAAGIPVRLLGTVTQLLLEAMCTFPN
HQQLQKNCLLSLCSDRILQEVPFNRFEAAKLVMQWLCNHEDQNMQRMAVAIISILAAKLS
TEQTAQLGAELFIVKQLLHIVHQKATQGVVDATLKFTLSALWNLTDESPTTCRHFIENQG
LDLFIKVLESFPSESSIQQKVLGLLNNIAEVGELHVELMVQGFLDHICSLLHSPEVEVSY
FAAGILAHLTSRGEAAWTLSITLRSDLLEQLHSTILKWPTPVCEMVAYRSFNPFFPLLEC
FHTPGVQLWAAWAMQHVCSKNAPRYCSMLLEEGGLHQLEKVQTHPDTHADVMRLAESILE
SLQRHQARTRQTTQTHTHTRCPLQPHTHKEGDKP
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atggccttcaattctttgaacatggatgaggcatcccctgcatctctgacggatctgtgt
ctgtcctacgtcagtaggaacctggagaggttctgtgtgaagcatgctgatggatctctc
tgtctcagagactctctgctgtttccccaggagctagctgaccagctgctggctaagatg
gccactgaaggtctgttgaatgacagtacagtaggagtgtttcgtagcagtgagtacctt
cggctgcgtcgtgcgtgtattcgtacggcccgtatctctgccgaggcattccagagagct
ctctgtcctcaccgcctgctggagctggacgctgctagggtcaacgctgacctcacaatc
tctgacatactacatggccttgcctccaacaaacactgccgggagagcttgcagcgcttg
gtccttacaggtctgaccatgtcctctctggaggaaccgtcatgtcactgtttcagctct
ctccaggggctgcggtccctctccctggccaatgtggacttctacgactctgggctggct
gatgtgtgttccctgtcccgcctggagagcctggacctgtccaacacctccgtgaccaac
ctcaaccctctactgggactcagagagaggctgaggtcactaacactacaccagctgaag
aggctggagatgagcactgcccagctactggctgtcattggacaactggaggcactgcag
cacctggacatcagtgatgataaacagttcacatcagacgtggctcgtcagctgctgggt
gagcctgggatcctgcctgctctggtctcgctggatgtgtctggacgcaaacaggtgaca
gatgcggcggtcaaggcgtttgtagaggagcgtccagggatgacctttgttggtctgctg
gctacagacgctggcttctctaacttcctcaatggaaagggcagcctcaaggtgacagga
gaggccaatgagactcagatctgtgaggcgcttcgtcgctacagtgagagggagggcttt
gtcagagaggctctgtttcatctcttcagtctcacacacgtcatggagaaaccacgccct
gacatactcaagttggtagttttggggatgaagaaccaccctgccaccctgaatgtccag
ttggcagccagtgcatgtgtgtttaacctgaccaagcaggacctggcagcgggcatacct
gttagactgctgggcacagtcactcaactactgctggaggccatgtgcaccttccctaac
caccaacagttgcagaagaattgcctgctctctctgtgcagtgaccgcatactgcaggag
gttcccttcaacaggtttgaagcagctaagctggtgatgcagtggttatgtaaccatgag
gaccagaacatgcagaggatggctgtggctatcatctctatactggctgccaagttgtct
acagaacagactgcacagctgggagcagagctcttcatagtgaagcagcttctccacatt
gtgcatcagaaggctacccagggcgtggtggacgccaccctcaagttcacactgagcgcg
ctctggaacctcactgacgaatcaccaaccacctgccgccattttatagagaaccaggga
ctggacctgttcatcaaagtactggagtcattcccctctgagtcttccatccaacagaag
gtgttggggctgctgaataacatagcggaggttggggagctgcatgtggagctgatggtt
cagggcttcctggatcacatctgctccctgctccacagccctgaggtggaggtgtcctac
ttcgctgctgggatactggcccacctcacctccagaggagaggctgcttggacactcagt
atcacactgaggtctgacctgctagaacaactgcactctaccatcctgaagtggccgaca
ccagtgtgtgagatggtggcctacaggtcctttaaccctttcttccccctgttggagtgt
ttccacaccccaggagttcagctgtgggcggcctgggccatgcagcatgtctgcagcaag
aacgcccctcggtactgcagtatgctgctggaggagggaggtctgcatcagttggagaag
gtccagacacaccctgacacccacgcagacgtcatgcgattggccgagagcattctggag
agcctgcagcgccaccaagctcgcaccaggcagaccacacagacacacacacacacccgc
tgcccgctacaaccccacacacacaaagagggtgacaagccctga
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