Oncorhynchus tshawytscha (Chinook salmon): 112248661
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Entry
112248661 CDS
T05605
Name
(RefSeq) nucleolysin TIA-1-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112248661
03041 Spliceosome [BR:
otw03041
]
112248661
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
112248661
Spliceosome [BR:
otw03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
112248661
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Calcipressin
RRM_Nup35
Flg_new_2
XOO_2897-deam
Motif
Other DBs
NCBI-GeneID:
112248661
NCBI-ProteinID:
XP_024273643
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All DBs
Position
LG04:complement(37336739..37354575)
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AA seq
391 aa
AA seq
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MMMMMDDEQPKTLYVGNLSRDVTEPLILQVFTQIGPCKSCKMIVDTAGNDPYCFVEFYEH
RHAAASLAAMNGRKIMGKEVKVNWATTPSSQKKDTSNHFHVFVGDLSPEITTDDVKVAFG
PFGRISDARVVKDVATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPP
APKTTYETNTKHLSFDEVVNQSSPSNCTVYCGGVGTGLTEQLMRQTFSPFGQIMEIRVFP
DKGYSFVRFTSHEGAAHAIVSVNGTSIEGHMVKCYWGKETTDMMSPMQQVQQVPQNKVGF
AAQPYGQYAQWYGNAQQIGQYVPNGWQVPTYGVYGQAQAWNQQGFNHLPASAGWTGVSAL
SNGGVMEATQGLNGSMLANQAGMGATGYPTH
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatgatggacgacgaacagcccaaaaccctgtatgtagggaacttgtccagg
gatgtcactgagcccctcatcctacaggttttcacacagatcggcccctgcaagagctgt
aaaatgattgttgatactgcaggcaatgacccatactgttttgtggagttctatgagcac
aggcatgctgccgcatcactggctgccatgaatggacgtaaaattatgggtaaggaggtt
aaagtcaactgggccacaacaccaagcagtcagaaaaaagacacaagcaatcatttccat
gtctttgttggagacctcagcccagaaatcaccacagatgatgtaaaagtggcctttggt
ccatttgggaggatatcggatgctcgtgtggtcaaagatgtggcaacgggaaagtctaaa
ggctatggctttgtctctttcttcaacaagtgggatgcagagaacgccattcagcagatg
ggtggtcaatggctaggcggcagacagatcaggaccaactgggccactagaaagccccca
gctcctaaaaccacctatgaaacaaacacgaagcacctgtcctttgatgaggttgtgaac
cagtccagccccagtaactgcactgtgtactgtggaggagtcggcaccggtctaacagaa
caattgatgagacagaccttttccccctttggacaaatcatggaaatccgtgtgttccca
gacaaaggatactcttttgtgcggtttacctctcatgagggagcagcccatgccattgtg
tctgtgaatgggacttcgatagagggccatatggtgaagtgttattggggtaaagagacc
acagacatgatgagtcctatgcagcaggtgcaacaagttccccagaacaaagtgggcttt
gcggcccagccttacggccagtatgcccagtggtatggcaatgcccagcagattggccag
tacgtccccaacgggtggcaggtacccacctatggggtttacggccaggcccaggcctgg
aaccagcagggttttaatcacttaccggccagtgctgggtggacaggtgtgagtgccctc
agtaacggtggggttatggaagctacacagggattgaatgggagtatgttagcaaaccag
gccggtatgggagccactggataccccacacactga
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