Oncorhynchus tshawytscha (Chinook salmon): 112248664
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Entry
112248664 CDS
T05605
Symbol
vamp8
Name
(RefSeq) vesicle-associated membrane protein 8 isoform X1
KO
K08512
vesicle-associated membrane protein 8
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04130
SNARE interactions in vesicular transport
otw04140
Autophagy - animal
otw04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
112248664 (vamp8)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
112248664 (vamp8)
04140 Autophagy - animal
112248664 (vamp8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112248664 (vamp8)
Membrane trafficking [BR:
otw04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
VAMP
112248664 (vamp8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Synaptobrevin
CcmD_alt
Integrase_H2C2
CD34_antigen
Baculo_F
DUF3619
LMBR1
ODV-E18
LRRC37AB_C
Fzo_mitofusin
DUF6118
DUF2207_C
RIFIN
DUF5693
DotU
DDB_G0292058_C
Orf78
Prominin
RNF152_C
Motif
Other DBs
NCBI-GeneID:
112248664
NCBI-ProteinID:
XP_024273650
LinkDB
All DBs
Position
LG04:complement(37438019..37449463)
Genome browser
AA seq
118 aa
AA seq
DB search
MSNDMEKGEVVEQDKVKTLQSQVDGVKDIMTQNVDRILARGERLDDLMGKSEDLQAGAQN
FKHTSQKVARSYWWKNMKLWVVIVVIVLVIILIIVLLATGVIPTSSPAPPLPTPTKAQ
NT seq
357 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatgatatggagaagggtgaggtggtggagcaggacaaggtgaagaccctgcaa
tctcaggtggatggggtgaaggacataatgacccagaacgtggaccggatcctggcccgg
ggtgagaggctggatgacctgatgggcaagtcagaggacctgcaggctggggctcagaac
ttcaagcacacgtctcagaaggtggctcgttcctactggtggaagaacatgaagctgtgg
gtggtgatagtggtcatcgtccttgtcataatcctcatcatcgtactgcttgccactgga
gtcatccctactagctcgcctgctccccctcttcccacacccacaaaagcgcaataa
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