Oncorhynchus tshawytscha (Chinook salmon): 112248674
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Entry
112248674 CDS
T05605
Symbol
vps37ba
Name
(RefSeq) LOW QUALITY PROTEIN: VPS37B subunit of ESCRT-I a
KO
K12185
ESCRT-I complex subunit VPS37
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112248674 (vps37ba)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112248674 (vps37ba)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112248674 (vps37ba)
Membrane trafficking [BR:
otw04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
112248674 (vps37ba)
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112248674 (vps37ba)
Exosomal proteins of colorectal cancer cells
112248674 (vps37ba)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mod_r
SAC3_GANP
DUF7191
VbhA
DarP
Glyco_hydro_63
Motif
Other DBs
NCBI-GeneID:
112248674
NCBI-ProteinID:
XP_024273664
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All DBs
Position
LG04:37743602..37772569
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AA seq
276 aa
AA seq
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MSGFWNKFSSYSMTQLNEMLEDDDRLNKIIQEMEEMQDVQQIKEMILASNRRLAEQNLQL
QPSLEHQKTQLTKCYGSLQESFEAYQVHKSKLDHTPGNSSLDTLLALLQAEGAKIEEETE
NMADSFLDGDVTLDTFIDSYQSKRKLAHLRRVKIDKLQEMVLKGHRLPQVPVSCSHPQEV
SARPAPLYTEVNNRSPVPQPRRAPPPPPAQQPPGVXPQPAVFSYPAIPYPPIPPRAAHLL
PSANPEHQHHFMSQCPPVLPQRPPPRMAPQSGFMIQ
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtttttggaacaagtttagctcttattcgatgacgcagctcaacgaaatgctt
gaagatgatgacagacttaacaaaattattcaagaaatggaagagatgcaggatgtgcag
cagatcaaggagatgatcctggccagtaaccggagactggcagagcagaatcttcaactg
cagcccagcctggaacaccagaagacccagctcaccaaatgctacggctcactacaggag
agctttgaggcctaccaggtccacaagtccaaactagaccacacccctgggaacagttca
ttggacacattgctagctctactgcaggcagagggagccaagattgaagaggagactgag
aacatggccgactccttcttggacggcgatgtcaccctggataccttcatagactcgtac
cagagcaagaggaagctggcccacctgaggagggtgaagattgacaagctgcaggagatg
gtgctgaagggccataggctgccccaggtgccagtctcttgctcccatccccaggaggtc
tcagccaggccagcccccctctacacagaggtcaacaaccgctcccctgtgccccagccc
aggagagctccccctccacctccagcccaacaacccccaggtgtangcccccagcctgct
gtcttctcctatcctgccatcccatacccccctatcccccccagggcagcccaccttttg
cccagtgccaacccggagcaccagcaccacttcatgtctcagtgcccccctgtccttcct
caaaggcctccccctcgcatggccccgcagtctggcttcatgattcagtag
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