Oncorhynchus tshawytscha (Chinook salmon): 112248764
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Entry
112248764 CDS
T05605
Name
(RefSeq) rho guanine nucleotide exchange factor 11 isoform X1
KO
K12331
Rho guanine nucleotide exchange factor 11
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
112248764
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112248764
Membrane trafficking [BR:
otw04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
112248764
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
RhoGEF
PH_16
PDZ
PDZ_6
RGS
PDZ_2
Motif
Other DBs
NCBI-GeneID:
112248764
NCBI-ProteinID:
XP_024273827
LinkDB
All DBs
Position
LG15:complement(20155369..20181967)
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AA seq
1460 aa
AA seq
DB search
MSLRPPTSTLDSGAAIKKHSHLPRLSSLTIGDSERKTSSGQQREPLADFPTESTGQGLVQ
RCVVVQKDQLGFGFTVCGERIKLVQNVRPGGAAVKAGVHEGDRIIKVNGSLVSSMSHQEV
VKLIKSGTYVALTLQGPPPSAAALHLHPLPTDLLPNQRTSLGGEAPPPPPPPLSPGLTSN
PSQRITKPLQNLDVQKHATQILRNMLEQGEAELQDLMEELLLNPSPSLEERIESAKRRAQ
QVRVKIQQDLDGTRLESVTSYVVAGEGRLSGDSSEGDFEACESPHSSPSTSSFRTPLYRR
QGSDTHTFSDSAGKAQIIGPEEEEEGDDSYPLNEMDGPFQDIELLKSRPAHMTVFMRYLF
SQLLDPNPLLFYLSVEVYLGSSPKDARALAPQICSHFLDPDAPLKIRVREEYLSDIESRL
HAQEDIRGPLSELQQQVLPDIQDQIQDYRSKQMMGLGSLFGEGDLQQLDGDPAKERLVVD
RQVTALWEILSKHEEESSSRLASAVLLYLRHSGIKLRDSRVFPGLSTEKEKWLSFFPKTK
KLSSSKKEKDGEDRKRNPILKYIGKPRSTSQSTFHVPLSPTEVRPGSVRNIIQQFENHTE
IPGEEGAEGDAPRLSSSSLGEDSMDSPTVSMRLARSESLKAQGEGRRRGGSSGAETVPRS
RSDVDMEDCGEESEGPGLRPLHHSTSSASSSSARSCENPTPPYTPRSSRRKSVEFPVALL
PDAPALEEDVVDSHNWQETVAPQVLATLCPREVDRQAVIYELLTTEASHLRTLRVLDQVF
FQKMRCVLSSEELACIFPNLPQVYELHASLCEAMKKRRESPIVQGIGDIMLARFEGVAGE
EFQEQASHLCSQQSQALELIKNKQRKDPRFAHIIQECEASPHCRRLQLKDLLVSETQRLT
KYPLLLDNILKHTEAGSTDLPPLQQAQACCRGILQAVNEVVRETEHRQRLNQYQRRLDPT
PQFKSLDLTSKRMIHEGPLTWKVSKDKTLEIQALLLSDLLVLLQRGPDDRLLLRCPSRFL
GGGGGGSGDTKASFSPVIQLDSLLVRSVATDNKALYVISTTEQQIYELVAGTSSEKNIWK
DQLEKTISLAAGSSPSTNNRSTPIFSPSLGNASPVSTGSHVYQSDDSMTGQAVSMGTNSP
NDEDNELTPTTPTAQSGAFLHIEGRDYGKKQIGVAEAALEDVEILKRLIFHNFEEVGWSH
DSDGTPTNETANERSPLNDRQRLASSDTLLNASPSQLEAEHSEAPPSEVGSSSVHVVRKA
VVAGSPSIPDDITDVNLHSDQSSEPRGGTSVRGNVFYLVMPTEQGDGLLDESHTDEVIDP
PTLTSTELPDLDQEVMSSNIKHHEEEGQVSSTLSAGKQLEPGNLRREGGLGQSQKVLQNY
VIKHVDEIFHTIEELMSKLHQLRHIETAHHQLLKTLREPPVNQESDDLPRNQVTVVRTPS
LDRNPGDAEPAKPEILSTGF
NT seq
4383 nt
NT seq
+upstream
nt +downstream
nt
atgagtctccgcccccccacctcaacactggacagtggggcagccattaagaaacactct
catctgcccaggctcagcagcctgacgataggagactcggagcgcaagacctccagcggc
cagcagagggagcctctggccgacttccccactgagagcacaggtcaaggtctggttcag
agatgtgtggttgtacagaaggaccagctagggttcggcttcactgtgtgtggcgagagg
atcaagctggtgcagaatgttcgaccaggtggcgcagcggtcaaggcaggggtccacgag
ggagacagaatcataaaggtcaatggctcgctggtgtcgtccatgtctcatcaggaagtg
gtgaagctcatcaagtctgggacatatgttgctctgactcttcaaggaccgcccccttca
gcagctgccctccacctacatcccctccccactgacctcttacccaatcagcggacgtca
ctgggaggagaagccccgcctccaccacctccacccctctctcccggactgaccagcaac
ccctcccaaaggatcaccaaaccactgcagaacctagacgtacagaaacacgccactcag
atcctcaggaacatgctggaacagggagaggctgagcttcaggacttgatggaggaactg
ttactgaacccctccccatccctggaggagcgaatcgaaagtgccaagcggcgggcccaa
caagtcagggttaaaatccagcaagatctggatggaactcgattggaatctgtgaccagc
tatgtagtagcaggagaaggtcggttgtcgggggattcaagtgaaggagactttgaggcc
tgtgagagcccccactcctccccctccacctcctccttcaggacccccctctaccggaga
cagggctccgacacacataccttctccgactcggctgggaaggctcagatcattggccca
gaggaagaggaggaaggggatgacagctatccgctcaatgagatggacggcccatttcaa
gacatagaacttctcaagtcgcgaccagcccacatgaccgtgttcatgagatacctcttc
agccagctactggatcccaacccgctgctgttctacctgtcggtggaggtctacctgggc
tccagccctaaagacgcccgtgccctcgccccacagatctgctcccacttcctggaccct
gatgctccgttgaaaatcagagtacgagaagaatacctgtccgatatagagagtcgactc
catgcccaggaggacatcaggggacctctttctgagctccaacagcaggtgctgcctgac
attcaggaccaaatacaggattacaggagtaagcagatgatgggtctgggttctctgttt
ggagagggagacctgcagcagctggatggagacccagccaaggagaggctagtggtggac
agacaggtcactgctctctgggaaatactctcgaagcacgaagaggagagcagttctcgt
ctagcctctgcggtgctgctgtacctccgtcactcaggcataaagctgagggactccagg
gtgttcccaggcctcagcactgagaaggagaagtggctctccttctttcccaagaccaag
aagctgagcagttcaaagaaagagaaggatggagaggacaggaagagaaaccccatcctg
aagtatatcggcaagcccaggagcacctctcagtccaccttccatgtccccttgtctccc
actgaagtgcgcccgggcagtgtgaggaacatcatccagcagtttgagaaccacacagag
atccccggggaagagggggccgagggagacgctccgagactgtcctccagcagcctggga
gaggacagcatggacagccccacggtgtcgatgcgtctggctcgtagtgagtctctgaag
gcgcagggagaggggcgtcggcggggcgggtcctcgggggcggagacagtccctcggtcc
cgtagcgacgtggacatggaggactgtggagaggagagtgaagggccgggcctgagaccc
ttacaccacagcacctcctctgcctccagtagctcagcacgatcctgcgagaaccccacc
cctccgtacacccctcgctcttccagaagaaagagtgtggagttcccggtggccttgctc
cctgacgccccagccctagaggaggacgtggtggacagtcacaactggcaggagacggtg
gccccgcaggtcctggctactctctgtccccgagaggtggacagacaggctgtcatctat
gagttgctgacgacggaggcgtctcacctgcgtacactcagggtgttggatcaggtgttc
ttccagaagatgaggtgtgttctgagctctgaagagctggcctgcatcttccccaacctg
cctcaggtctacgagctccacgcgagtctgtgcgaagccatgaagaagagacgagaatct
cccatcgttcagggcatcggtgacatcatgctggccaggtttgagggcgtggcgggggag
gagtttcaggagcaggcgtcccacctgtgcagtcagcagtctcaggccctggagctcatc
aagaacaaacagcgcaaagacccccgtttcgcacacatcatccaggagtgtgaggccagt
ccacactgtaggaggctgcagctgaaggacctgctggtgtctgagactcagagactcacc
aagtaccctctgctactggacaacatcctcaaacacacagaggccggttccacagacctc
cctcctctccaacaggctcaagcctgttgccgggggatattgcaggccgtcaacgaggtt
gtcagggagactgaacaccggcagcggctcaaccaataccagcgcaggttggaccccacg
ccacagttcaagagtctggacctgaccagtaagagaatgatccatgagggtcctctcacc
tggaaagtcagtaaagacaaaaccttggagatccaggcgctgctgttgtcagaccttctg
gtgttgctccagagaggtccagacgaccggctgctgctgcgctgcccgtcccgctttctg
ggggggggaggtgggggtagcggggataccaaggcctccttcagccccgtgatccagcta
gactcactgctggtgcgctctgtggccacagataacaaggccctgtacgtcattagcaca
acagagcaacagatatacgagctggtagcagggacgtcctcagagaaaaacatctggaag
gaccaacttgaaaagaccatctcattggctgctggctcctcaccttcgaccaataacaga
tccacacctattttctccccgagtcttggtaatgcttcccctgtctcaactggcagccat
gtctaccaatcagacgactcgatgacggggcaggcagtttcaatggggacaaactcccct
aacgatgaggacaatgagctcacgcccaccacaccaacggcacaatcaggggctttcctc
cacattgagggacgggactacggcaagaagcagattggagtggctgaggcagctcttgaa
gacgtggagatactaaagcgtctgattttccacaactttgaggaagttggatggagtcac
gactcggacggaacgcccacaaacgagacagccaatgagaggagcccgctcaatgacaga
cagagactggcgtcctctgatactcttctcaatgccagtcccagccaattggaggctgag
cattccgaagccccgccctcggaggtggggtcctccagtgtacatgttgtgaggaaagct
gtggttgcgggctctccttctatccctgatgacatcactgatgtcaacctccactctgac
caatcatccgagccgagaggcgggaccagtgtacggggaaacgtgttctacctggtgatg
cctacagagcagggagacggactgctggatgagagtcacacagatgaggtcattgatccc
cccaccctgacctccactgaacttcctgatctggaccaggaagtgatgtcatcaaacatt
aagcatcatgaggaagaagggcaggtctcttccaccctgtctgctggcaaacaattggag
ccaggaaatctgaggcgggagggagggcttggccaatcacaaaaggtcctccagaactat
gtgatcaaacacgtggatgagattttccacacaatcgaggagctgatgagcaagctgcac
cagctgaggcacatcgagacagctcatcaccagctgctgaaaacactaagagagccgcct
gtcaatcaggagtcagatgatctccctcgcaaccaggtaaccgtcgtcaggacgccgtct
ctggaccggaacccaggggatgcagagccagctaagcctgagatcctctccactggattc
taa
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