Oncorhynchus tshawytscha (Chinook salmon): 112248782
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Entry
112248782 CDS
T05605
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 12-like
KO
K08626
a disintegrin and metalloproteinase with thrombospondin motifs 12 [EC:3.4.24.-]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
otw01002
]
112248782
Peptidases and inhibitors [BR:
otw01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
112248782
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
TSP_1
ADAMTS_spacer1
Reprolysin
ADAMTS_CR_2
Pep_M12B_propep
Reprolysin_5
ADAMTS_CR_3
Reprolysin_3
TSP1_CCN
Reprolysin_2
TSP1_spondin
Reprolysin_4
Motif
Other DBs
NCBI-GeneID:
112248782
NCBI-ProteinID:
XP_042176667
LinkDB
All DBs
Position
LG04:complement(40209841..40252183)
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AA seq
1641 aa
AA seq
DB search
MRCPRVSRVLFLLHSVLFLAASHVEFSLPGSLSPDEEQGRFLQSQSDVSMVHPVKVDSDG
QFLSHSLAHRFERVRHKRDLWPLEGRVYYKVTYKGRNLFFNLTVNNYLVSNKYVLEWRNG
SLNRTEHRTTGENACHLIGTVTDPTNARGTAAISTCEGLKGLFTLPEGPHFIQPIQGSTD
GAVEREGPGLHVVYPSVTTAPHRYRRSSEARDTHNPCGVRDAPGDSLVVEREREDWEREQ
QEEEREREEETAQHRSQRSISRDRWVETMVVADTKLIDYHGSDNVESYIFTIMNMVAGIF
HDASIGNAIHITLVRLILLQGEEKGLKIIHHADTSLASFCAWQKKLNPLSDTHPAHHDVA
VLVTRKDICAGLNEPCETLGLSHLSGMCQPHRSCNINEDSGLPVAFTVAHELGHSFGIHH
DGQGNDCELDGRHPFIMSRQLMYDTSPLTWSSCSKDYITRFLDRGWGFCLDDRPSKKDLT
TPLARLGVRYTTQHQCQLQYGPNATYCHEIDNVCQILWCSVNGSCRSKLDSPIDGTSCGP
EKWCISGDCVIIGKLPETVNGNWGQWSSWSHCSRTCGAGVQSAHRECNHPKPEFGGKYCT
GERRRYHICNTKPCQKAKPTFREMLCSEFDTVAYQNELYEWVPVASLSSPCELHCRPVDE
HFSEKMLDAVTDGTPCFMNNNSRSLCVNGVCKEVGCDYGIDSNAVEDRCGVCLGDGSSCE
TVQMTFDGGDSFGYVDVGVIPEGARDIVVQEMEEAGNFLALRGQGSEEYFLNGEYIIQWN
GEYKAGGTTFYYERSGNLENLTSPGPTKQPVMIQLLYQEKNPGIKYEYTIKRNRQTGNEV
IKSEYRWRHGAWTDCSTTCGLGEQQQPVRCFELEVGVVDEALCDQESRPEDRHRKCKNMD
CPARWWVGGWQLCSATCGSGGVRNRTVLCVRTVAGEERVLHPGDCKQLLKPKPVVPCNRD
QLCGPDWAAGNWSMCPVTCGGSVRTRKVTCLTAPPKKCDIKTMPRSKSLCALQSCPSAGL
QRRPGPPPKFRRFYLPKRHPTRQPVTHTWGPKSTSNATPGTSTVTVTERTATPNTTSTTK
PLPRSSTATDIIDVDDHVVKNGRVEDKDGAFITTSPTDTENRERDMREKEEEDEKKEEGS
AADFVFPDVGVTYTPGYDYVVEDVTAEEEGLTDLDIFTTESSLRTPIQSPPTVTTARLHP
TSTPHIPHTSVPTTSRTTQHTTRVPLTTSPPTPQTSTAHWAMNTSHYTLTPPNTTPSINP
FTKRTTRVPHTTPIPRAHTAEMRSTLIAPYHTTQGLYPNTEGIFHTSDAPYFSSPTPEAP
SPTVRIIKWKKPIKTPKTGSAAPRSKKPGPHSKGKGQEQRPGSPVVTFASDYGYLNAQEP
ISMEVFWLVGNWSECSTSCGLGAVWRPVLCSSQQESDCANLKRPEPARTCHLRPCATWLS
GDWSKCPKGCEVAGRRQREVQCVDEQKGRPLRPFHCQVLSSRPPSTLSCRLQPCQPWRTS
PWGQCSRSCSGGLRERLVYCPEPQRCSGTQRPNDTETCNLQPCSYWDPQDWEECSVSCGE
GLQHRVVQCVVEDSDSVENSLCEPSSRPDTLRKCHMQECQTNTGPLCRKNSMSSRFCDKL
KLLGRCSLRSIQKQCCITCRG
NT seq
4926 nt
NT seq
+upstream
nt +downstream
nt
atgcgatgtccgcgtgtgagccgggttctttttctgctacattctgttttgtttttggct
gccagccatgtcgagttctcgctgcctggtagcctctctccagacgaagaacaaggtcgc
tttctccagtcccagtcggatgtgtcaatggttcatccagtcaaagttgacagcgatgga
cagtttctctcccactctctagcacaccgctttgagcgcgtgcggcacaagcgagacttg
tggcctttggagggacgcgtttattataaggtgacctacaaaggtcgcaatttgtttttt
aatctaacagtcaacaactatttggtgtcgaacaaatatgttctggagtggcggaacgga
agtctgaaccggactgagcaccgtaccactggggagaatgcgtgccacctgatcggcacc
gtgacggatcctactaatgcgcgcgggacagccgccatcagcacctgtgaaggcttgaaa
ggactctttaccttgcctgaaggaccccacttcattcaaccaatccaggggtccactgat
ggggctgtcgaaagggagggaccagggctccatgtggtctatcccagcgtaaccacggca
ccacacagataccgacgcagctctgaggcccgggacacacacaacccctgtggggtcaga
gacgcaccaggtgattccctagtggtggagagggaaagagaggactgggagagggaacag
caggaagaagagagggagagagaggaggagacggctcaacatcgctcccaacgctccatc
agcagagataggtgggtagagaccatggtggtggcagacactaaactgatcgactaccac
ggcagtgacaacgttgagtcttacatcttcaccatcatgaacatggtggcagggatattc
catgatgccagtataggaaatgccatccacatcaccttggtccgcctgatcctcctgcag
ggcgaggagaaagggttgaagatcatccaccatgcagacacctctctggccagtttctgt
gcctggcagaagaaactcaacccactaagtgacacacaccctgctcaccacgacgtggca
gtgctggtcaccaggaaggacatctgtgcagggctcaacgagccgtgtgagacccttggt
ctgtcccatctgtcagggatgtgccagcctcaccgtagctgcaacatcaacgaagactca
ggactacctgtagccttcaccgttgcacacgagctgggacacagctttgggatccaccat
gatggtcaggggaatgactgtgagctggacggcagacaccccttcatcatgtccagacag
ctaatgtacgacacctccccacttacctggtcctcctgctctaaagactacatcacacgc
ttcctagatcgtggttggggcttctgtctggacgaccgtccctcaaagaaggatctgacc
accccactggcccgtctgggggtccgctacaccacacagcaccagtgtcaactacagtac
ggccccaatgccacctactgccacgaaatcgacaatgtgtgccagatcctgtggtgttca
gtgaatgggtcctgccgttctaaactggactcccccatagatggcactagctgtggccct
gagaagtggtgtatctcaggggattgtgttatcatagggaagctaccggagacagtgaat
gggaactggggacagtggagtagctggtctcactgttccaggacctgtggggccggggtg
cagtctgctcacagggagtgtaaccaccccaaaccagagtttggtgggaagtactgtaca
ggcgagaggaggcgttaccatatctgtaacaccaaaccatgccaaaaggccaaacccacc
ttcagagagatgctgtgtagtgaatttgacacagtggcctaccagaacgaactctacgag
tgggtccctgtggccagcctatcgagtccgtgtgagctgcactgtcgtcctgtggatgag
catttctctgagaagatgctggatgctgtgacagatggaactccctgcttcatgaacaac
aactccagaagcctctgtgtcaacggagtgtgcaaggaggtgggctgtgactatggtata
gactctaacgctgtagaggatcgttgtggagtgtgtctgggcgatggttcctcctgtgag
actgtccagatgacctttgatgggggggatagcttcggctacgtggatgtgggagtgatc
ccagagggggcacgtgacattgtggtccaggaaatggaggaggcggggaactttctggct
ctgcggggtcaggggtcagaggagtatttcctgaatggcgagtacatcatccaatggaat
ggagagtacaaggcaggcggaactaccttctactacgaacgcagcggaaacctggagaac
cttacctcccctggacccaccaaacaaccagtcatgatccagttgctgtaccaggaaaag
aatccaggtataaagtatgagtacaccatcaagaggaaccgccagacaggaaatgaggtc
atcaagtcggagtacaggtggaggcatggggcctggacagactgcagcaccacctgtggg
cttggtgagcagcagcagcctgtcaggtgttttgagttggaggtgggcgtggtcgatgag
gcgctttgtgaccaagagagccgcccggaggaccgacaccgcaagtgcaagaacatggac
tgccccgccaggtggtgggtggggggctggcagctgtgctctgccacctgtggttcggga
ggggtgaggaatcgcacagtgctgtgtgtgcgcacggtggccggggaggagagggtgctc
caccctggggactgtaaacagctgctcaaacccaaacctgtagttccctgcaacagagac
cagctctgtggacccgactgggccgcgggcaactggagcatgtgcccagtgacatgtggt
ggtagtgtgcgcacccggaaggtcacctgcctgaccgcacccccaaaaaagtgtgacatc
aaaaccatgcctcgctccaagtcgctgtgtgccctgcagagctgcccaagcgcaggcctc
caacggcgcccgggaccaccccctaaattccgccgtttctacctgcccaagagacaccca
accaggcagccagttacacacacctggggccccaaaagcaccagcaacgctacacccggg
accagcactgttacagtgactgagagaactgcaacccccaacaccacctctaccaccaag
cccctcccacggtcctccacagccactgatatcattgacgtcgatgaccatgtggtgaag
aatgggcgtgtggaggacaaggacggggcatttattacgaccagtcctactgacacagag
aacagggagagggacatgagagagaaagaagaggaggatgagaaaaaggaggaggggagt
gcagctgattttgtgtttccagatgtgggggttacgtacaccccggggtatgactatgta
gtggaggatgtgactgcagaagaggaggggcttacagatctggacatttttaccacggaa
tcctctctcaggacccccatccaatcaccgcccaccgtgaccaccgccaggttacaccct
acatccacaccacacataccacacacaagtgtcccaacaacatcacgtacaacccaacac
acaaccagagtacccctcactacctcccccccaaccccacaaaccagcactgcgcactgg
gctatgaacaccagccactacaccctcactccccccaacaccaccccttctatcaaccct
ttcaccaaacgtacaaccagggtgccacacaccacccctataccccgggcacacacagcg
gagatgaggagtacacttatagcaccttaccacactacacaaggactgtatcccaataca
gaaggcattttccacactagcgatgccccgtacttcagcagcccaaccccagaggccccc
agccccactgtgagaatcattaaatggaagaagcccattaagacccccaagactggcagc
gctgcaccccgttctaaaaagccaggcccacattcaaagggaaaaggtcaggagcagaga
ccaggaagtcccgtagtgaccttcgccagtgattatggctacctgaacgcccaagagcca
atcagcatggaggtgttctggttggtgggtaattggagcgagtgctcgacgtcgtgtggc
ctgggggcagtgtggaggccagtgctgtgtagctcccagcaggaatcggactgtgccaac
ctgaagagaccagaaccagctcgcacctgccacctgcgcccctgtgccacctggctgagt
ggcgactggagcaagtgtccgaaggggtgtgaggtggcggggaggaggcagcgtgaggtg
cagtgtgtggacgagcagaaggggcgtccactgagaccgttccactgccaagtcctgtcc
tccaggccgcccagcaccctgtcctgtcgtctccaaccctgccagccctggagaacctcc
ccctggggacagtgctcacgtagctgtagtggtggattgagggagcggctggtatactgc
cctgagccacagcgctgtagcggcacccagaggccaaacgacacagagacctgcaacctg
cagccctgcagctactgggacccacaggactgggaggagtgctctgtgagttgtggtgag
gggttgcagcatcgtgtggtgcagtgtgttgttgaggactccgactctgtggagaacagt
ctgtgtgagccgagcagcaggcctgacacactcaggaaatgccacatgcaggagtgtcag
actaacaccggtccgctgtgtaggaagaacagcatgtcgtctcggttctgtgacaagctg
aagctgctgggccgatgctccctcaggtccatccagaaacagtgctgtatcacctgtaga
gggtaa
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integrated database retrieval system
