Oncorhynchus tshawytscha (Chinook salmon): 112248797
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Entry
112248797 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF165
KO
K17821
E3 ubiquitin-protein ligase RNF165 [EC:
2.3.2.27
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112248797
Enzymes [BR:
otw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112248797
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112248797
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
U-box_ZFPL1
zf-ANAPC11
zf-RING_Vps41
zf-RING_16
RINGv
zf-RING_4
zf-Nse
zf-RING-like
zf-RING_10
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
112248797
NCBI-ProteinID:
XP_024273884
LinkDB
All DBs
Position
LG04:40595036..40605701
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AA seq
347 aa
AA seq
DB search
MVLVHVGYLVLPVFGSVRNRGSLFNRQQHSHATSCRHFQLGPHAPLPIDFPMPHPGQPQS
GINPHLAPSGHQLHSPLNPLPTPQFQDLXGPPFLPQALHQQYLLQQQILEAQNRRIMPPS
RRTPERMPHQSHRLRLGYEFVPALHVPPQPVGQQPRYLAEGTDWDLSVDAGLPPHQYHIR
PLPQHFQHYLTSPRMHHFPRNSTSTQVVVHEIRNYPYPQLHLLALQGLNPSRHASAVRES
YEELLQLEDRLGSVNRGAIQTTIERFTFPHKYKKRIPQDLKLGLEDDELDTDEKCTICLS
MLEDGEDVRRLPCMHLFHQACVDQWLATSRKCPICRVDIETQLTPDS
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggttttagtgcatgtcggatatctggttcttcctgtatttggctcagtaagaaataga
ggatccctctttaaccggcagcagcatagccatgctacctcttgccggcacttccagcta
ggcccccatgccccgctgcccattgacttccccatgccccacccaggtcagccccagtcg
ggcataaacccccacctggctccctctggccaccagctccactcgcccctcaacccctta
cccacaccccagttccaggacctcnttggtccccctttcctacctcaggccttacaccag
caatacctcctccaacagcagatcctagaagcccagaaccgccgcatcatgccaccttca
agacgcaccccagagagaatgccccaccagtcccacagactgcggctggggtacgagttt
gttcctgccctccatgtccccccacagcctgttggccagcagcctcgctacctggccgaa
ggcacagactgggacctgagtgtggacgcggggctgcccccccaccagtaccacatccgc
ccactgccccagcactttcaacactacctgacctctccccggatgcatcacttccccagg
aacagcacctccacccaagtggttgtccatgagatcagaaactacccatatcctcagtta
cacctgctggccctgcagggcctcaacccctcccgccatgcatccgctgtgagagagagc
tacgaggagctactgcagctggaggacaggttgggcagtgtgaaccgaggggccatccag
accactattgaaaggttcaccttccctcacaaatacaagaagagaataccccaggacctg
aagctagggctggaggacgacgaactggatacagatgagaagtgtactatctgtctatca
atgctggaggatggagaggatgtcaggagattaccctgcatgcacctcttccaccaggcg
tgtgttgaccaatggctggccaccagtaggaaatgccccatatgccgggtggacattgag
acccagttgacaccagacagctga
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