Oncorhynchus tshawytscha (Chinook salmon): 112248841
Help
Entry
112248841 CDS
T05605
Name
(RefSeq) calmodulin-regulated spectrin-associated protein 1-B-like isoform X3
KO
K17493
calmodulin-regulated spectrin-associated protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
otw01009
]
112248841
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112248841
Protein phosphatases and associated proteins [BR:
otw01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112248841
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
112248841
Intermediate filaments
Intermediate filament-binding proteins
112248841
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAMSAP_CKK
CAMSAP_CH
CAMSAP_CC1
CH
Motif
Other DBs
NCBI-GeneID:
112248841
NCBI-ProteinID:
XP_024273953
LinkDB
All DBs
Position
LG04:42911800..42955177
Genome browser
AA seq
1585 aa
AA seq
DB search
MDVELCAGGHSTRRKMDSAGEGTVEVVPLELYDSARAKIDANLRWLFAKAYGIDHIPEDL
RDPFYTDQYEQEHIKPPVLHLLLSCELYCRVCALILKTDQAASLQSHLSVIQALSRKGIY
VMESDDTPVTEADLACVPIKMSAHMPMVDALMMAYTVEMISIEKVVACVKRFSTFSASKE
LPFDLEDAMVFWINKVNLKMREITERELKVKHHPLESPNHQKSPSKWYWKLVPVRYRREH
TSGRQLPFFPLLEDLMRDVCDGAALLTVVHYYCPNLMKLDDICLKEVTSIADSLYNIQLL
KEFANEYLNKSFYLTIEDMLYSPLVLKHNVMVFIAEFFWWFETVKPEFVQPRTEEFKDAR
SMAQPKSARPSVPISNATKRSFQVTPGITEASLSVSAQSSPDVSNSTKGGPAAAFSTSHP
LLPLRQRQQKQQQGEDGSGIRNRSNSLENRQPRGSVQAWPDKRQRPMSTLNPYTFGISAT
DSDADIASGDSVSLARSISKDSLASNVANLTPKHQGLTPQGHTLIGPAQVGRAPVSPAPR
RVNGHGLLGNVNMEEEEEEKLVSVMRTEASTALPSQGEATQPTAGARPKDSFYLEPLMPA
VLKSAKEKSVCLNKEEESGEVGRSWGAGSIRRVEGVPGLAASARRKIPTSLNRTSTPTSS
GEFAVSAEASLAGPPQGQGACKNLVTSSVDPSSREPPGGFYLHSDSDNQNPGQDLEPDLD
EADEEDLDEALTTKDPTRPRKAFDEEEESAKLQEDLKEKEDRDKGDDGGSGRSSPCLSTH
SQASSLASGSIRMTSFAERKAQQRFGSNHDLRPSASSSQRTTPDGSECSGPLSLPTSWRL
KRDQSPSSPQGGRGDGGTNLLASELVQLHMQLEEKRKAIEHQKKKMEVLSARHRQKLGKA
AFLHIVKKGKSDTLPHPLKPDYNSKEELNGDKGGSSKDDSCLDALRVAKETGSATSPVPD
ALEMVERKCSGSTGLLLDEELDLNECNRSIEMLNDAIGSIQQQMMQLSLQQDLLMKQNVQ
SPPGPPPPNDKTSGSEPKAQSAAHFVEMGSGAPTTGTAPTRKPPKLTSARGPRSKPSELK
LVKEHGRQGLTSSRAITPTHSLETLPHLRQFPGGRSPRADPPDTRTPSVGGETISVQDKP
GRSATFRLNDEANLRTMARIDPVNVTPEVSFECLSSTLREGELNSSDGSGKENVPLEEVS
WSKAPLIEVDLSDLKDPEEMEGDCGQNSTMDGEDGEQKSGLGFFFKDEQKAEDELAKKRA
AFLVRQQKKAEDARLRKLQLESETEQKREESRRKAEEDRMRKEEEKARRELIKEQYLRRK
QQELMEEQGLGSPAKPKTPKTKPKKPSHQTHRPKSAFSREESSSDTFSSKCSSSTPDNLS
SAQSGSSLSLASAATTEADSVNSGGAGSQRGESESFPGLSRNASRNTERDWDNGSTASSI
NSMAEYTGPKLFKEPSSKSNKPIIFNAISHCCLAGKVNEPQKNTLLEELEKVEAHHLMIL
FRDGGCQFRGVYSFFPDTEEILKLTGTGPKSISKKMIDKLYKYSSDRKQFTVIPAKTVSV
SIDAITIHNHLWQAKRTTVPKKSGK
NT seq
4758 nt
NT seq
+upstream
nt +downstream
nt
atggatgtggaattgtgtgctggcgggcacagcacccgaagaaagatggattcagctggc
gaagggacagtggaggttgtacctttggaattgtacgactctgccagagcaaaaatagac
gccaacctacggtggctgttcgccaaagcctatggcattgaccacatcccagaggacctg
cgggacccattctacacagaccagtatgagcaagagcacatcaagccccccgtcctccac
ctgctgctgtcctgtgagctctactgccgtgtgtgtgccctcatcctaaagacggaccag
gccgcctcgctgcagtcacacctgtcagttatccaggccctgagccgtaaagggatctat
gtcatggagagtgatgacacgccagtcacagaggccgacctcgcctgtgtgcccatcaaa
atgagtgcccacatgccgatggttgatgccctgatgatggcctacacggtggagatgatc
agcatagagaaggtggtggcctgcgttaaacgcttctccaccttcagcgcctccaaggag
ctgccctttgacctggaggacgccatggtattctggatcaacaaggtgaacctgaagatg
agggagatcacagagagagagcttaaagtcaagcatcacccgctggagtctcccaatcac
cagaagtctccctccaaatggtattggaaactagtacctgtacggtaccgcagggagcac
acgtcagggcgccagttgcccttcttccccctactggaggacctgatgagggatgtgtgt
gatggagccgcgctcctcaccgtggtccactactactgccccaacctcatgaagcttgac
gatatatgcctgaaggaggtgacgtccatagctgacagtctgtataacatccagctgctc
aaggagtttgccaacgagtatctcaacaagagcttttacctaacaatagaagatatgctc
tactctccactggtgctcaagcacaatgtgatggtgttcattgcggagttcttctggtgg
tttgagacggtcaagccagagtttgtccaacccaggactgaggagttcaaagatgcccga
tccatggctcagccgaagagtgcccgcccctcagtgcccatctccaatgccaccaagcgt
agcttccaggtgacccctggcatcaccgaggcctctctgtctgtctctgcccagagcagc
cctgatgtctccaacagtactaaaggaggtcctgctgcagccttcagcacctcccaccca
ctcctccctctgaggcagagacaacagaagcagcaacagggagaggatggatcaggaatt
agaaaccgctccaactccttggagaacagacagccacgaggttcagtgcaggcctggcct
gacaagagacagaggccaatgtcaacgctcaacccgtacacgtttggtatctcagccact
gacagcgacgctgatatagcctctggggacagtgtgagtctggcccgctccatcagtaaa
gacagcctggcctctaatgtagccaacctcacccccaaacaccagggtctcaccccccag
ggccacaccctgatcggacccgcccaggtaggccgcgccccagtcagccctgcaccccgc
cgagtcaacggccacggcctgctgggaaacgtcaacatggaggaggaggaggaggagaaa
cttgtgtcggtgatgaggactgaagcgtcaacagctctccccagtcagggcgaggcgacg
cagccaactgctggggccaggcccaaggatagcttttacttagaaccactgatgcctgct
gtgttgaaatcggcaaaagagaagtctgtatgcctgaataaggaggaggagagtggggag
gtggggcgatcgtggggagcggggtccatccggagagtagagggggtgcctggactcgcg
gcgtcggccaggagaaaaatccccaccagcctaaatcggacctctactcccacttctagt
ggggagtttgccgtgtctgctgaagcttcattggctgggccaccccagggacaaggagcc
tgtaaaaacctggtcaccagtagtgtggacccctcctccagagagccacctgggggcttc
tacctccactctgacagtgacaaccagaatcctggtcaggacctggagccagacctggac
gaggctgatgaggaggacctggatgaagctctcaccaccaaggacccaaccaggcctagg
aaggccttcgatgaggaagaagagtcagccaagctgcaggaggacctgaaggagaaagag
gacagggataaaggggatgatggtggtagtggacgctccagcccctgtctcagcacccac
tcccaggccagcagcctggccagcggcagtatacgcatgaccagcttcgctgaacgcaag
gcccagcagcgctttggcagcaaccatgacctgcgacccagtgcgtccagctcccaaagg
accaccccagacggctccgagtgcagcgggcccctctctctgcccacctcctggaggctg
aagagggaccagagcccctcctcgccccagggggggcggggggacggtggcaccaacttg
ttggcttctgagctggtacagctccacatgcagctggaggagaagaggaaggccatcgag
caccagaagaagaagatggaggtgctgtcagccagacatagacagaagctgggcaaggct
gcctttctgcacatcgtcaagaagggcaagagcgacaccctgccccacccgctcaaacca
gactacaactccaaagaggagctcaacggggacaaaggggggagctcgaaagatgactcg
tgcctggatgcactgagagtggccaaagagacagggtctgccacctcgccagtcccagat
gccttagagatggtggaaaggaagtgcagcggtagcactggtctgctgctggacgaagaa
ctggacctgaacgaatgtaaccgctccattgagatgctgaatgatgccatcggcagcatc
cagcagcagatgatgcagctgtccctccagcaggacctgctgatgaaacagaatgtacag
tcccctcctggcccccctcctcccaacgacaagaccagcggctctgaaccaaaagcccaa
tctgccgcccactttgtggagatgggcagcggcgcaccaaccaccggtaccgcaccaacc
aggaaaccccccaagctgacctcggccagaggcccaaggtcgaagccctctgagctgaag
ctggtcaaggagcacgggaggcagggccttacctccagcagggcaatcacccccacccac
agcctggagaccctgccccacttgaggcagttccccgggggcaggtcccccagggcagac
ccccctgacaccagaaccccctctgttggtggagagacaattagtgtgcaggacaagcct
ggacggagcgccacctttaggctcaacgatgaggctaacctgcgcacaatggcccgtatc
gacccggtaaatgtcaccccagaagtgtcctttgagtgcctgtccagtaccttgagggag
ggggagctgaattcctcggacggctcggggaaggagaacgtccccttggaggaagtgtca
tggagcaaagcccccctgatagaggtggacctgtcagacctgaaggacccagaggagatg
gagggagactgtggtcaaaacagcaccatggatggagaagacggagaacagaagtctggc
ctgggattcttcttcaaggatgaacagaaggcggaggatgagctggctaagaagagggca
gcgttcctcgtaaggcagcagaagaaggctgaggatgcccggttacgcaaactacagctg
gagtcagagactgaacagaagcgggaagagtccaggcggaaggcggaggaggaccggatg
aggaaggaggaggagaaggcccgtagggagctgatcaaggagcagtacctgaggaggaag
cagcaggagctgatggaggagcagggccttggcagcccagccaagcccaagacccccaag
accaagcctaagaaacccagtcaccagactcacagacccaagtctgcgttcagcagagag
gagtcatccagcgacaccttctcttccaagtgctcttcatctacacctgacaacctgagc
agtgcccagtcaggctccagtctgtccctggcctctgctgccaccactgaggcagacagc
gttaactctggaggagcaggatcccaacgtggtgagtctgagtctttcccaggcctgagt
cgaaacgccagtcgaaacactgagagagactgggacaacggctccactgcatcttcaatc
aactccatggcagaatacactggtcccaagctgttcaaggagcccagttccaagtccaat
aagcccatcatcttcaacgctatctctcactgctgcctggctggcaaggtcaatgaaccc
cagaagaacaccctcctagaggagctggagaaggttgaggctcaccacctgatgatcctg
ttcagggacgggggctgccagttccggggagtctactccttcttcccagacacggaggag
atcctcaagctgactggcacgggccccaagagcatcagcaagaagatgattgacaagctc
tacaagtacagctcggaccgcaagcagttcaccgtcatccccgccaagactgtgtcggtc
agcatagacgccatcaccatccacaaccacctgtggcaggccaagagaaccactgtgcca
aagaagagtgggaaataa
DBGET
integrated database retrieval system
