Oncorhynchus tshawytscha (Chinook salmon): 112248879
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Entry
112248879 CDS
T05605
Symbol
usp24
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 24 isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
otw01002
]
112248879 (usp24)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112248879 (usp24)
Enzymes [BR:
otw01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
112248879 (usp24)
Peptidases and inhibitors [BR:
otw01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
112248879 (usp24)
Ubiquitin system [BR:
otw04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
112248879 (usp24)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
UCH
UCH_1
UCH_UBL1
DUF3517
UBA
UBA_7
ubiquitin
Motif
Other DBs
NCBI-GeneID:
112248879
NCBI-ProteinID:
XP_024274037
LinkDB
All DBs
Position
LG01:28530655..28578814
Genome browser
AA seq
2625 aa
AA seq
DB search
METEEEQHMTTLLCMGFPDAVAIRKALRLAKNDINEAVALLTNESPGLGYGYEPMESGPA
PGPSGDGESSGRTGTGGFDPPPAYHDVVESERSNDENGNCSGSSMEFPTTNLYELENRVF
TDHWSIPYKREESLGKCLIAATCLAKHGLADADENCKQFMDRCMHEAFKKLLTSSAVHKW
GTEIHEGIYNMLMLLVELVAERVKRDPIPVGVMGVLTIAFNPDNEYHFKNRMKTCQRNWS
EVFGEEAMFAVSPSNSYQKEPHGWLVDLVNRFGEMGGFTAIQAKLNTQEIEIGYVSALVQ
PLSVCAEYLNSSLVQPMLDPVIHKMITYVQNLEEKDLKDKRLVSIPELLSAIKLLCMRFQ
TTLVTVVDDLRLDTLLRMLKTPHFSTKMNSLKEVTKLIEESTMSKTVKNAIDTDRLLDWL
VENSVLSIALEGNIDQAQYCDRIKGIIELLGSKLSLDELSKIWMIQAGQSSTVIENIHTI
MAAAAVKFNLDQLSHLFVLIQKSWEVESDRVRQKLLSLIGRIGREARSEATTGKVLEVLW
ELAHLPTLPTSLVQQASEEHLAILTDAYAVKETVKRCYIIKCIEDIKKTQTEEEGKTSDI
QSSFLTGSWGKKKAKENSLAKSSQQGSPQAVWVVPALRQLHEITRSFIKQTYQKQDKQSI
IQDLKKNFEIVKLITGSLVVCHRLAVSAAGSNGLAGHTLVDGRYTYQEYLDGHLRFLAFF
LQEASLYLVWNRAKELWDCLVSGPEVCELDREMCFEWFTKGQHDLESDVQQQLFKEKILK
LEPYEITMNGFNLFKTFFENVNLCDHRLKRQGTQLCVERLDLSGMDFIWRIAMETPDEEI
ANEAIQLIITYSYTNLNPKMKKDSVSLHKKFIADCYKRLEAASSALGGPTLTHAVTRATK
MLTATAMPTVATSVQSPSRSTKLVIIERLLLLAERYVITIEDLYSVPRTILPHGASFNGH
PVSLHVTYESTKDTFTLEAHSNETVGSIRWKIAEHLSCPVDNVQIFANDSVLTMNRDQKL
LSQLGFSDEQSLTVKSSGTGTPSGGSSESSASASSSSSAVFNSAYAMEQEKSLPGVVMAL
VCNVFEMLYQLANLDEPRTTLRVRKLLLLIPTDPEVQDALDNFVPKESSVWSHQKTLFTL
GQGSGSRSPSLGSKQQHQPSAASILESLFRSSAPGMSTFRVLYNLEVLSSKLMPTSDDEM
AKTSVKSFCENFLKAGGLSLVVNVMQRDSIPSEVDYETRQGVYSICLQLARFLLVGQSMP
SLLDDDVIREGDTLSSRPFRNAGRPGRQLSLCGTPEKSSYRQMSLSERSSIRVEEIIPAA
RVAIQTMEVGDFTSTLACFMRLTWAAAAGRLDLVGSPQPIRPEHSSLLPLGVRTRVSSTG
SNCSSSSEGEAPPTALHAGICVKQQSVSIKDCIIAREALSLLVTCLQLRTQQLGSFYILP
CVSDFIIDILLGSASGEIRRVACDQLYTLSQSDSSAFPEIVKPNVFLLRVVLASQLPLWS
PTSVMRGVNQRLLSQCTEYFDLRCQLLDDLTSSEMEVLSVSAVAMLEDEISWLDNFEPSW
SSEMETSEADNILQAGHLRLIKTLLSLCGTEKEQLGHSLIQQLLDDFLFRASRIILNTSN
PASSSPPSHDFFPKCSTASSRLAAYEVLVMLADSSVANLQLITRELLSMHHQSDPSLSKE
FDFLPPVDSRSVSGFVGLKNGGATCYMNAVFQQLYMQPGLAEAFLSIEDDTEQPDESVFC
QVQSLFGHLMESKLQYYVPENFWKIFKMWNKELYVREQQDAYEFFTSLVDQLDEHLKKIG
REQIFKNTFQGIFSDQKICKDCPHRYEREETFMALNLGVTSCQSLEISLDQFVRGEVLEG
TNAYYCEKCKEKRTTVKRTCIKSLPSVLCIHLMRFGFDWESGRSIKYDEQIRFPWVLNME
PYTVSGMARQDGGVEGGEGRGEAGGSPRKKVTISENYELVGVVVHSGQAHAGHYYSFIKD
RRGSARGRWYKFNDNVVEEFDMNDETLEYECFGGEYRPKVYDQSNPYPDVRRRYWNAYML
FYQRISDQNSPVLPKKSRVSVMRQEAEDLTLSAPSSPDVSPQSSPRPARANNDRLSVLTR
LVRKGEKKGLFVEKMPARIYQMVRDENLKFMKNRDVYNSDYFNFTLSLASVNATKLKHPA
YQAMARVSLQLAVHFLFHTYLHTKKKLRVDTEEWMTTVEVLLSKSSEACHWMAQYLVGPE
GREITKVCLLECGVREVRVVVAAILEKTLESALHFADSGLDSLTDALLSLLDKDVPENVK
NCNQYFSLFSNFAQRGSGPCNLLLKHSAYRRMLIFLLGPNRQNNQNRRWSPAQAREFLHL
HSTLALMTLHSDLNTQHTHDQGVCKLIVSSIPASSRLLPLNADIMASLFSPEGQPYLLEV
MFAVRELSGPLTVLIEMVTYCSFCNEPFSLGVLQLLKTQLETAPPHELKNVFQLLQELLV
VEDPLQTQRLKYAFESEKGLLALMHQSNNVDSSRCYQCVKFLVTLAQKCAPAKDYFKDLS
GHWSWAVQWLQKKMSEHYWTPQSNVSNETSTAKTFQRTISAQDTLAYATALLNEKEPSGS
SNGSDGSPANENADRSLRQVQLDRKGSESPMMLGDSKSDLEDVDP
NT seq
7878 nt
NT seq
+upstream
nt +downstream
nt
atggagacagaagaggaacaacatatgacaactctcctctgcatgggtttcccagatgca
gtggcgatacgcaaggcgctacgcctggcgaagaacgacatcaacgaggctgttgcgctc
ctgaccaacgaaagccccggtcttgggtatggatatgagccgatggagagtggccctgcc
ccaggcccgagtggagacggggagtccagtgggcggaccgggactggagggttcgaccca
cctcccgcataccacgatgtggtggagagcgagaggagtaatgatgagaatgggaattgt
tcaggcagcagtatggagttccccaccactaacctgtatgaactggagaacagagtgttc
actgaccactggtcaatcccctacaagagagaggagtcactgggcaaatgtctgatcgca
gccacctgccttgccaaacacggtctggcggatgcggatgaaaactgtaaacagtttatg
gacaggtgtatgcacgaggcctttaaaaagctcctgaccagtagtgcggtccataagtgg
gggacagagatccatgaggggatctacaacatgttgatgttactggtggagctggtggct
gagagagtcaaacgggaccccataccagttggcgtgatgggtgtactgactattgccttc
aacccagacaatgagtaccactttaagaaccgtatgaagacgtgtcagaggaactggagc
gaggtgtttggagaggaagccatgtttgctgtgtcacctagcaacagctaccaaaaggag
cctcatggctggctggtagatttggtcaatcggtttggagagatgggagggttcactgct
atccaggctaaactcaatacacaggagatagagattgggtatgtgtctgctctggtccag
cctctatctgtgtgtgcagaatacctcaactccagcctggtgcagcccatgttggatcct
gttattcataagatgatcacctatgttcagaacctggaggagaaggacctgaaagacaag
aggctggtgagcatcccagaactgctgtcggccataaagctgctgtgtatgaggttccag
accaccctggtcactgtggtggacgacctgcgcctggacactctgctacgcatgctgaag
actcctcacttctctaccaagatgaactccctcaaagaggtgactaagctgattgaggag
agtactatgtctaagacggtgaagaatgccattgacacagacagactgctggactggctg
gtagaaaactctgtcctctcaatagcactggagggtaacatagaccaggcccagtattgt
gatcgaataaaaggcatcattgaattgctgggcagtaaactgtctctggacgagctctct
aagatctggatgatacaggcaggacagtcgtccacggtgattgagaacatccacaccatc
atggctgcagctgccgtcaagttcaacttagaccagctcagccacctgtttgtccttata
cagaagagctgggaggtagagagtgaccgtgtgaggcagaagctgctcagtctgattggg
aggatcggtagagaggcccgctctgaggccaccacggggaaggtgctggaggtgctgtgg
gagttagcccacctgccaaccctgcccacctccctggtacagcaggcgtctgaggaacac
ctggccatccttactgacgcatacgctgtgaaggagactgtcaaacgctgctacatcatc
aaatgtatagaagacatcaagaagactcagactgaggaggagggtaaaaccagcgacatt
cagagctcgtttcttactggctcctggggcaagaagaaagccaaagagaactcattggcc
aaatcttcacagcagggcagcccccaagcggtctgggtggttccagctctgcggcagctc
catgagatcacacgttccttcatcaaacagacctaccagaaacaggacaagcagagcatc
atccaggacttgaagaagaactttgagattgtcaaattgatcacaggatctttggtggtc
tgtcatcgactggctgtgtctgcagctgggagcaatggactggccggacacacactcgta
gatggacgatacacctaccaggagtatctagacggccacctgaggttcctggccttcttc
ctccaggaggccagcctctacctggtctggaacagagccaaagaactatgggattgcctg
gtctctgggcccgaagtctgcgagctggacagagagatgtgttttgagtggttcactaag
ggccagcatgatctggagagtgatgttcagcagcagctcttcaaagagaagatcctcaaa
ttggagccctacgagattactatgaatggcttcaatctgttcaagaccttttttgagaac
gtcaacctgtgtgaccatcgcttgaaacgccaggggactcaactgtgtgtggagcggctg
gacctgtctgggatggactttatctggcgcatcgccatggaaacgcctgacgaggagatt
gctaacgaggccatccagctcatcatcacctacagctacaccaacctcaacccaaagatg
aaaaaggattctgtgtctttacacaagaagttcattgctgattgttacaaacgactggag
gcagccagttcagctctaggaggccccacgttgactcatgctgttaccagggcaaccaag
atgctgacggccaccgccatgccaactgttgctacgtcggtccaatcaccttccaggtcc
accaaactggttatcattgagaggctgctgctattggctgagcgttacgtcatcactatc
gaggatctgtactctgtgcctcgtaccattctacctcatggagcgtcgttcaacggccac
cctgtctctctacacgtcacctatgagtccaccaaagacaccttcaccctggaggcccac
agtaatgaaactgtaggcagcatccgatggaagatcgccgagcacctcagctgtccagtt
gacaatgtccaaatctttgccaatgacagcgtgttgacaatgaaccgggaccagaagctt
ctgtcccagctggggttcagtgatgagcagtctctgacagtgaagagctctggcacaggg
acaccctcaggtggcagctctgaatcctccgcctccgcctcctcctccagctctgcggtc
ttcaactcagcctacgctatggaacaggagaagtcccttccaggtgttgtcatggcgttg
gtgtgcaacgtgtttgagatgctctaccagttggccaacctggacgaaccccggacaacc
ctgcgtgtgcgtaagctgctgctgctgatcccaacagacccagaggttcaggatgctcta
gataactttgttcccaaagagtccagtgtatggagtcaccagaagacgctgttcaccctg
ggtcaggggtcaggctctcggtctccgtctctgggttctaagcagcagcaccagcccagt
gctgcctccatcttggaatcactcttcagatcctctgctcccgggatgtccaccttcaga
gtcctctacaacctagaggtgttgagttctaagttgatgccgacctcagatgatgagatg
gctaagaccagtgtcaagtctttctgtgagaacttcctgaaagctggaggtctcagtttg
gtggtgaacgtgatgcagcgagactctattccctctgaggtggactatgagaccagacag
ggagtctactccatctgtctacaactggccaggttccttttggttggccagagtatgccg
tcgttgctggatgatgatgtcatccgagagggcgacacgctgtctagtcggccgttccgt
aatgcggggcgaccggggaggcagctgtcgctgtgtggaacgccagagaagagctcctat
agacagatgtctctgtctgaacgctcctccatcagagtagaggagatcatccctgctgca
cgcgtagctatacagacaatggaggtgggggacttcacctcgacgttggcgtgcttcatg
cgtctgacatgggcagcagccgctggccgattggacctcgtcggcagtccacagccaatc
agacctgagcacagctcgctcctcccacttggggtccgcacccgtgtcagcagcactgga
agtaactgcagctccagcagtgagggcgaagcgccacccacagctctgcatgctgggata
tgcgtgaagcagcagagtgtttctattaaagactgcatcatcgctagagaggccctgtca
ctactggtcacctgtctacagctacgaacacagcagctaggctcattctacatcctcccc
tgtgtcagtgacttcatcatcgacatcctgctaggatcagccagtggagagatccggcgt
gtggcatgtgaccagctgtacacgctgagccaatccgacagctctgcgttccctgagatc
gtcaaacccaatgtattcctgctccgagtcgtcctcgcctcccagctgcctctctggagc
cccacgtctgtcatgagaggagtcaaccagaggttgctgtcacagtgtactgagtacttt
gacctgcgatgtcaactactggatgacttgaccagttcggagatggaggtgttgtcagtg
agtgcggtggccatgttggaagatgaaatcagctggttggataactttgagcccagctgg
agctctgagatggagaccagtgaggctgacaacatcctgcaggctggacacctccgcctc
atcaaaacactactgtcactctgtggcacagagaaggaacaactgggtcactctctgatc
cagcagctgttagatgacttcctcttccgagcatcacgcatcatcctgaacacgtctaac
cccgcctccagctccccccccagccacgacttcttccccaagtgcagtacggccagcagc
agactggcagcctacgaggtgctggtgatgctggcagacagctctgtggccaacctacag
ctcatcaccagagagctgctgtccatgcaccaccagtcagacccctcgctcagcaaggag
tttgacttcctcccgccggtggacagtcgctctgtgtcggggttcgtagggttaaagaac
ggtggagccacctgctatatgaatgctgtgttccagcagctgtacatgcagcctggcctg
gctgaggcctttctgtctatagaggacgacacggagcagccagacgagagtgttttctgt
caggtccagtctctgttcggacacctgatggagagcaagctgcagtactatgtccctgag
aacttctggaagatctttaagatgtggaataaggagctgtacgtacgagagcaacaggat
gcctatgagttcttcacttcactggtggaccagttggacgagcaccttaagaaaatcggc
cgtgagcagatctttaagaacactttccagggaatcttctctgatcagaagatctgcaaa
gactgtcctcaccgatatgagcgagaggagacgtttatggcgctgaacctaggtgtgact
tcgtgtcagagtcttgagatctcactggaccagttcgtcaggggggaggtgctggaagga
accaacgcctactattgcgagaagtgcaaggagaagcgtaccacagtgaagcggacctgc
ataaagtccctgcccagtgttctctgtatccatctgatgcgcttcggcttcgactgggag
agcggacgctccatcaaatacgacgagcagatcaggtttccctgggtgctgaacatggag
ccctacacagtgtctggcatggctcgtcaggatgggggggtggaggggggagagggccgg
ggggaggcaggtggctcacccaggaagaaggtcactatctctgagaactacgagctggtg
ggagtcgtagtccacagcgggcaggcgcacgctggacattactactccttcataaaggac
cgacggggaagtgctagaggaaggtggtataagtttaatgacaatgtggtcgaggagttt
gacatgaacgacgagacactggaatatgagtgctttggaggagagtaccggcctaaagtc
tacgatcagtctaacccctacccggatgtgcggcggcggtattggaacgcttacatgttg
ttctaccagaggatcagtgaccagaactctcctgttctccctaagaagagcagagtcagc
gtcatgaggcaagaggcagaagacctcacgctttcggcgccctctagcccagacgtcagt
ccccagtcgtcccctcgccctgccagggccaacaatgaccgtctctctgtcctgacccgc
ctcgtacggaagggagagaagaaaggactgtttgtggagaagatgcctgctaggatctac
cagatggtgagagatgagaacctgaagtttatgaagaacagagatgtgtacaacagcgac
tacttcaacttcactctgtcactggcctccgtcaacgcgacaaagctgaagcacccagcc
tatcaggccatggccagagtcagtctccagctagcagtccacttcctgttccacacctac
ctccacaccaaaaagaagctgcgggtggacacagaggagtggatgactacggtggaggtg
ctgctgtctaaaagcagtgaagcctgtcactggatggctcagtacctggtgggacctgag
ggacgagagatcaccaaagtgtgtctgttggagtgtggggtgagggaggtgagggtcgta
gtggcagccatcttggagaagaccttagagagtgcgctccacttcgctgactctggattg
gacagcctgaccgacgcactcctctccctattggacaaagacgttcctgagaacgtcaaa
aactgcaaccaatacttcagcctcttcagcaactttgctcagagaggctctggtccgtgc
aatttgttgttgaaacactcagcgtatcgtaggatgctcatctttcttctcggacccaac
agacagaacaaccagaatcggaggtggagtccagcccaggccagagagttcctgcacctc
cactccactctggccctgatgactctccactcagacctcaacacacagcacacacatgat
caaggtgtgtgtaagctgattgtgagcagtatccctgcctcctcccgccttctccccctc
aacgctgacatcatggcctcgctcttcagccccgagggacagccttacctgctagaggtg
atgtttgcggtgcgggagttgtcaggccctctgactgtgctgatagagatggtgacgtac
tgctccttctgtaacgaacccttctccctcggagtactacagctgctcaagacccagttg
gagaccgctccaccccatgagttgaagaacgtgttccagctgctgcaagagctgctggtg
gtagaggaccctctccagacccagagactgaagtacgcctttgagtcagagaaaggcctg
ctagcattgatgcaccagagtaacaacgtggacagcagccgctgctaccagtgtgtcaag
ttcctggttaccctggcacagaagtgtgctcctgctaaggactattttaaagatctgtct
ggtcactggagctgggcagtgcagtggctgcagaaaaagatgtcagaacactactggact
cctcagagcaatgtgtccaatgagacgtccacagccaaaacgttccagcgcaccatctca
gcccaggacacgctggcctacgccacagcgctgcttaacgagaaggagccatctggcagc
agcaatggctctgacggcagcccagccaacgagaatgcagaccgcagcctccgacaggta
cagcttgacagaaagggttccgagtctcccatgatgctcggtgattcaaagagtgatctg
gaggatgtcgacccttag
DBGET
integrated database retrieval system
