Oncorhynchus tshawytscha (Chinook salmon): 112248952
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Entry
112248952 CDS
T05605
Symbol
homer1b
Name
(RefSeq) homer protein homolog 1b isoform X1
KO
K15010
homer
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
112248952 (homer1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
otw03037
]
112248952 (homer1b)
Cilium and associated proteins [BR:
otw03037
]
Other cilia and associated proteins
Stereociliary proteins
112248952 (homer1b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WH1
DASH_Duo1
BLOC1_2
DnaX_C
DAHL
GAS
DUF1664
Prominin
TMF_TATA_bd
Motif
Other DBs
NCBI-GeneID:
112248952
NCBI-ProteinID:
XP_024274191
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All DBs
Position
LG04:48864612..48977128
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AA seq
406 aa
AA seq
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MEGGSELVIRLPGRSHSPDNNGSSNFGLGEFGQTMVLRHKEVHHFFLAPFREQPIYSTRA
HAFQIDPNTKKNWVPTSKHAVTVSYFYDSTRNVYRIISLDGTKAIINSTISPNMTFTKTS
QKFGQWADSRANTVYGLGFSTEHHLTKFAEKFSEYKEAARQAKGKSQDGKMELATSPSQE
SPAGELSSPLTPVTPPAMDNINGTDDPCDITPEPRPEPSQNALAFTHSPSINKHWEAELS
ALKGNNAKLTATLLESTANVKQWKQQLAAYQEEAERLHKRVTELECQNTQTPVIKSQKTE
LNQTIEELESTLKDKEEEMERLKEEVENANELLEQRHSLTQKLLETELHGRVLEEQLLGA
EQRLEESQEEQENFRKSLRTLLEMLDGKIFELTELRDSLAKLIEGS
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcggtagcgagttggtgattcggttaccgggacgatcccattccccggacaac
aacggcagcagtaactttgggttaggcgagtttggccagacaatggtgttaaggcacaaa
gaggttcaccacttcttcttggcccccttcagggagcagccgatctacagcacgcgggcc
catgcgttccagattgaccccaacaccaagaagaactgggtgcccaccagtaaacacgct
gtcactgtgtcctacttctatgacagcacccgcaatgtttaccgcatcatcagcctcgac
ggcaccaaggcgataatcaacagcaccatcagccccaacatgaccttcacaaagacgtct
cagaagtttggccagtgggccgacagcagagctaatactgtttatggcttgggcttctct
actgaacaccacctgaccaagtttgcagagaagttttcagagtataaggaggcagcacgt
caggccaagggaaaaagtcaagatggaaagatggaactagccacctctccctctcaggag
tcgccagcaggtgaactctcttcacctctgactcctgtgactcctcccgccatggacaac
atcaacgggacagatgacccctgtgacatcacacccgaaccccgtcctgaaccgtctcag
aacgcactggctttcacacacagcccctccatcaataagcactgggaggcagagctatca
gctctaaaggggaacaatgctaagctaacagccactctgctggagtccacagctaacgta
aaacagtggaaacaacaactggctgcctaccaggaggaggccgagagactccacaaacgg
gtgactgagctagagtgccagaacacccagacccctgtgatcaaatcccagaagacggag
ctaaaccagaccattgaggaactggaaagcactctgaaggataaagaagaggaaatggag
cggttgaaagaggaagtggagaacgctaacgagctgctagagcagagacactccttgaca
cagaaactactggagacggagttgcatgggcgagtgttagaggagcagctcctgggagct
gagcagcgattggaagaaagtcaggaagagcaggagaacttcaggaagagcctaaggacc
ctactggagatgctggatgggaagatatttgagctgacagagctcagggacagcttggcc
aagctcatagagggcagctag
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