Oncorhynchus tshawytscha (Chinook salmon): 112248967
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Entry
112248967 CDS
T05605
Symbol
si:ch211-288d18.1
Name
(RefSeq) USP6 N-terminal-like protein isoform X1
KO
K20133
USP6 N-terminal-like protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112248967 (si:ch211-288d18.1)
Membrane trafficking [BR:
otw04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
112248967 (si:ch211-288d18.1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
Motif
Other DBs
NCBI-GeneID:
112248967
NCBI-ProteinID:
XP_024274222
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All DBs
Position
LG04:complement(51612565..51656039)
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AA seq
621 aa
AA seq
DB search
MIRRKSSHLFERVVKKHDRRSKRDKKEKPSGRQEGVEIDPWEDADYSIYRVTDRFGFLHD
EDLPAPSAHEEKKKNLEIERVEKWLKMVKKWDKYWNSDRMVKRVYKGLPLQLRGQAWALM
LDVEKLKNENEGKYERMKEQARMFSQEIKQIDLDVNRTFRNHIMFMDRFGFKQQSLFHVL
SAYSVYNTEVSYCQGMSQVAALLLMYMNEEDAFWALSQLLTNQKHAMHGFFIPGFPKLQR
FQAHHDQILSKLIPKLKKHLDREQMSCGIYSTKWFLQCFIDRTPFTLTLRLWDIYILEGE
KLLTAMSYTILRIFKKRLLKMNLEDLREFLQEKIALSFLNSDDIIIDQLQASMVELRKMK
LDLPPPAKPDELPQKALGLELPVLLTPLKPPRGVSPDQGSKRPGAGGLGLHIITYQPDII
SQDDSPSKEDRKDKEALNMEEEDEEEVSLPSPDPILIHTIQAQVTPDGPPQAGAGPPPYE
PPGGNEPNVMGQPAILMVLHKEKNVESSSGPVALPETQVVVQQGTNTPPQSPMEESTLTA
PVAPSSLSPPQPPCSVPRTQSAPLAQASQRPTGLAQSESHSVGERVEDGYLARLLEQAMA
LPKHRAQTGEKGEPGDPEWPV
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgatacggaggaagagttcacacttgtttgagcgtgtcgttaaaaagcacgaccgtcgc
tctaagagggataagaaagagaaaccgagtggcagacaggagggggtggagattgacccc
tgggaggatgcagattacagtatttacagagtcactgaccgtttcgggtttctgcatgac
gaggatctgccagcccctagtgcacatgaggagaagaaaaagaacctggaaattgaaagg
gtagaaaaatggctgaagatggtgaaaaaatgggataaatactggaacagtgacaggatg
gtaaagcgtgtgtataagggtctccccctgcagctgagaggccaggcctgggccctgatg
ctggatgtggagaagttgaagaatgagaacgaggggaagtatgagaggatgaaggaacag
gccagaatgttctcccaggaaatcaaacagatcgatttggacgtgaacaggacgtttaga
aaccacatcatgttcatggatcgatttggattcaaacagcagtctttatttcatgtcctg
tctgcctattcagtctacaacacggaggtgagctactgccagggcatgagccaggtcgcc
gccttgctgctgatgtacatgaacgaggaagacgccttctgggccctgtcacagctactg
accaatcagaagcatgccatgcacggtttcttcattcctgggtttcccaaactgcagcgc
ttccaggcgcaccacgatcagattctctccaaactcatccccaagctgaagaaacatctg
gacagggaacagatgtcctgtgggatctacagcactaaatggttcctgcagtgtttcatt
gacaggaccccgttcaccctgactctacgcttgtgggacatctacattctggaaggagag
aaacttcttactgccatgtcctacacaatccttagaatatttaagaaacgtctcctgaag
atgaatctggaggacctgagagagtttcttcaggagaagatcgccctgtctttcctcaac
agcgatgatatcatcatcgatcagctgcaggcctccatggtggaactacgcaagatgaag
ctggaccttccacccccagccaagccagatgagctgccacagaaggccctgggtttggag
ctacctgttctgctcacccctctcaagccccccaggggagtctcccctgaccagggatcc
aaacgaccaggagcagggggtctgggtctccacatcatcacctaccagccagacatcatc
tcccaagacgacagcccttccaaggaggacaggaaggacaaggaagctctcaacatggag
gaagaggatgaggaggaagtatctcttccatctccagaccccattctcatccacaccatc
caggctcaagttacccccgatgggcctccccaggctggggctgggccaccaccttatgag
ccaccagggggtaatgagcccaatgttatgggacaacctgccattcttatggtactccac
aaagaaaaaaatgttgagagctcctctggtccagtggctttaccagagacacaggtcgta
gttcaacagggtacaaacacacctccacaaagccccatggaggagtcgaccctgactgcc
ccagttgccccttcatcccttagccctccccagccaccctgcagtgtcccccggactcag
tcagcacccttagcccaggcttcccagcggcctacgggcctggcccagagtgagagccat
tcagtgggggagagggtggaggatgggtacctggccaggcttctggagcaggccatggct
ctgcctaaacacagggcccagacaggagaaaaaggagagccaggagacccagaatggcca
gtttga
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