Oncorhynchus tshawytscha (Chinook salmon): 112248977
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Entry
112248977 CDS
T05605
Name
(RefSeq) F-box/LRR-repeat protein 5 isoform X1
KO
K10271
F-box and leucine-rich repeat protein 5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112248977
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
112248977
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box-like
LRR_4
LRR_6
Hemerythrin
F-box
DUF7885
LRR_At1g61320_AtMIF1
LRR_At5g56370
LRR_8
Motif
Other DBs
NCBI-GeneID:
112248977
NCBI-ProteinID:
XP_024274245
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All DBs
Position
LG01:complement(29067874..29082240)
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AA seq
681 aa
AA seq
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MAPFPDEVDVFTGPHWRMKQLVGLYCEKLSQTNFSNNNDFRSFLQSLCATFKEFKMHEQI
ENEYIIGLLQQRSCTVYNVHSDNKLSEMLSLFEKGLKSVKSEYEQLNYARQLKERLEAFT
QDFLPHMKEEEEVFQPMLMQYFTYEELKDLKKQVMAQHCSQQRWDCAAEVLKGFSLWSQA
EELHKAFKYADHEKTDELEKELCSTHISQLPTEILLHLFRYLGPEDLCHCGQVSSAWSDL
AKTGSLWRHLYPVRWARGDHYRGPPADLNQEPDEEWVKSLQDEGKAYQEWDEDADVDESD
ETCEDSLAISSAQREKKLLNEMIQNLLPAVGSSVRSIVLAYSSTVSSKMVRQILSLCPNL
THLDLTQTDVTDSAFDSWSSLGACPSLEHLDLSGCEKITDHTLKKLSISQKRSDRQAKLL
KSPPPISLLDERILHLMGGSRQALIFKQRTGTQRSSPSRVWVLDPSELADIEDAAEWNRR
GGVSTTEGRGFVATKPGGLCCCRRSRRRGLRTSYSTSYWQQQYGLGEACCGHSTCCTGEM
ALRACGGLQCLSYTTRGSAGAEFWTKCSSGGQRCLELYNRTDQSDARRSLRFLSLSGCYR
VTDLGLRALSQRGGLPFLEHLNLSGCLLITEVGLQELVSACPALNDEHFYYCDNINGPHA
DTASGCQNLQCGFRACCRSGE
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggcaccttttcccgacgaggtggatgtttttactggtccacattggcgaatgaaacag
ttggtaggactttactgcgagaagctgtcacagaccaacttctccaacaacaatgacttc
cgctcatttcttcagtcactgtgtgccaccttcaaggagttcaagatgcacgaacagatt
gaaaacgagtatatcatcggcctgttgcaacagcgcagctgcactgtatataatgtgcac
tccgataacaagctctcagagatgttgtccctgtttgagaaaggactgaaaagcgttaag
agcgagtatgagcagctgaactatgcccggcaactgaaagagcgactggaggcattcaca
caggacttcttaccccacatgaaggaggaggaagaggtgttccagcccatgctgatgcag
tacttcacctatgaggagctgaaagacctcaagaagcaggtgatggcacagcactgtagc
cagcagcgatgggactgtgcagcggaagtgctgaaggggttcagtctgtggagccaggca
gaggagctgcacaaggccttcaagtatgctgaccacgagaagactgatgaactagagaaa
gagctgtgctccacccacatctcccagctacctacagagatcctgctgcatcttttccgc
tacctgggtcctgaggacctgtgtcactgtggccaggtgtcctcagcctggtccgacctg
gccaagaccggctctctgtggaggcacctctaccctgtacgctgggccagaggggatcac
tatcgtggccccccagctgatctgaatcaggaaccggatgaggagtgggtgaagagtctg
caggatgagggcaaggcctaccaggagtgggatgaggatgcagatgtggatgagtctgat
gagacttgtgaagactcattggctataagctcagctcagagggagaagaagctactgaat
gaaatgatccagaaccttctgccagctgtgggttcctctgtcaggtccatcgttctggcc
tacagctctacggtctccagtaagatggtgcgtcagatccttagtctctgtcctaatctc
actcacctggacctcactcagactgatgtcacagactccgcctttgacagttggtcatct
ctgggggcatgtccatctcttgagcacctggacctatccggctgtgagaagatcactgac
cacaccctgaagaagctgtccatttctcagaaacgatctgaccggcaagccaagcttctg
aagagcccgcctcccattagtctgctggacgagcggatcctccatttgatggggggcagc
aggcaggccctgatcttcaagcagcgtacggggacacagcgcagcagcccctccagggtc
tgggtcctggacccttcggagttggccgacatcgaggatgcagcagagtggaaccgccgc
gggggagtgtctaccactgaggggcgaggctttgtggcgacgaagccaggaggtttgtgt
tgctgcaggaggagtaggaggcggggcctcaggacaagctatagcacctcctactggcag
cagcagtatgggcttggggaggcctgctgtggccattcaacctgctgcactggtgagatg
gccctgagggcttgtggagggctgcagtgtttgtcttacaccaccaggggcagtgcaggg
gcagagttttggactaaatgctcctctgggggccagcggtgcctggagctttacaacaga
actgatcagtcagacgctcgacgctcgctgagattcctcagcctttctggatgttatcgg
gttacagacctgggtttgagggcgctctctcagcgtggaggtcttcctttcctggagcat
ctgaacctgtctggatgtctcctcatcacagaggttgggctacaggagctggtgtcagcc
tgtcctgccctcaatgatgaacacttctactactgcgacaacatcaacggtccccatgct
gatacggccagcggctgccagaacctgcagtgtggcttcagagcctgctgccgctctgga
gagtga
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