Oncorhynchus tshawytscha (Chinook salmon): 112249007
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Entry
112249007 CDS
T05605
Name
(RefSeq) activating molecule in BECN1-regulated autophagy protein 1 isoform X1
KO
K17985
activating molecule in BECN1-regulated autophagy protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04137
Mitophagy - animal
otw04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
112249007
04137 Mitophagy - animal
112249007
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112249007
03029 Mitochondrial biogenesis [BR:
otw03029
]
112249007
Membrane trafficking [BR:
otw04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
112249007
Mitochondrial biogenesis [BR:
otw03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
112249007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EML
EIF3I
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
eIF2A
Acyl_CoA_thio
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
112249007
NCBI-ProteinID:
XP_024274328
UniProt:
A0AAZ3RXN5
LinkDB
All DBs
Position
LG04:54062558..54158324
Genome browser
AA seq
1418 aa
AA seq
DB search
MTVYPKNSVRILSARERGARGLGSQRLLQQLVEEKTRRMKWQSQKVELPDSPRSTFLLAF
SPDRTLIASTHVNHNIYITEIKTGKCVHSLVGHRRTPWCLTFHPTIPGLVASGCLDGEVR
IWDLHGGSESWFTESNVAIASLAFHPTAQLLLIATNNEVHFWDWSRREPFALVKTASETE
RVRLVRFDPLGHYLLTAIVNPSNQQQSDDDSEVPMDSVEMPHFRHRSFLQSQPVRRTPIL
HNFLHILSSRNSGSQSEEQHPPAPAANSAADSPSLPSGHYSALRNRSRPPYQGCVQHLGM
VCFCSRCSATRAPSPSGEDPSDPESLEAQSHASTFSSARTEPRQPSEPRSSHRPSAFSSV
YGSARGHSLRTPSSGPGQRSIPGLITNQGHQQPGLECSGRLAGADWMGSMLNMRPERSGG
VGVSPPRTSASSVNLLSVLRQQEGSFQSPVYTSTTEGGSLPPAVVSPHTSGHSSVDGPST
SSGHHSLGEGGSNSPTSIRNVLQCNLNRYFMEYDRMQEMEQSGGAGGESSQEQQTREMLN
NNIECERPVTPHYQPPNSSDGGSGPSRGHMNRCRVCHNLFTFNQGTQRWERTGQTPSQEE
GSTSWQPPSPNPAFHTMRPTVLHVPQSSDRRQLLQPQPSADEPGGDTAFTHRGSPSSQRE
QAVGLVYNQETGQWERVYRPSVSPSPAVNVPQEALNQEMPDENHDDDYLRRRLLESSLMS
QSRYDISGSRDHPIYPDPARLSPAAYYAQRMIQYLSRRDSIRQRSLRYQSRLRPLSSTSD
SPGSNPSPSVENNEVDFEEFEDNGDRARHRAPRNARMSAPSLGRFVPRRFLLPEYLPYAG
IFHHERGQPGLATHSSVNRVLAGAVIGDGQSAVASNIANTTYRLQWWDFTKFDLPEISNS
SVNVLVQNCKIYNDASCDISADGQLLAVFIPSSQRGFPDEGILAIYSLAPHNLGEMLYSK
RFGPNAISVSLSPMGHYVMVGLASRRILLHHTTDHMVAQVLRLQQPHGGETSMRRMFDVV
YPMASDQRRHVSINSARWLPEPGLGLAYGTNKGDLVICRPVDAQSDGDGPAEHSEPIFAV
NNNRGSGTGGSRDGERPGSSRAPLRSERDMRLMNAIGLQPRHPTPVVTSQGTQTPVLRLQ
NAETQTDLEPQVPSTSRASQATNIGGHIRDLHPGSSTEMVPETPPHTLQEDGESAEAFTE
ASTTLANPGESQEQGSGEDAVSRLRRLIAEGGMTAVVQREQSTTMASMGSFGNNIIVSHR
IHRGSQTGTEAQDGGRDTQGRGQGLDGGGWASFSPSHRGTLSFTEPTSRILTHHSMQLGE
SSGFLLEPSGAHSRTVAPLPSQYITVSSHLSPQGPIGVEEGADETPMDTDDAFEGVGLVD
DLDLHLPSASSSSSTLSPVVSPLDNNFSTSYHGDPYSR
NT seq
4257 nt
NT seq
+upstream
nt +downstream
nt
atgactgtctacccaaagaattcggtgcggatcttatctgcccgggagcgtggggcccgt
ggccttggttcccagcgcctcctgcaacagcttgttgaggagaagacccggcggatgaaa
tggcagagtcagaaagtggagttgccggacagccctcgttctaccttcctgttggctttt
agcccggacaggaccttaattgcctccactcatgtcaaccacaacatttatatcaccgag
attaagacaggaaagtgtgttcactctctggtgggccatcgccgcactccttggtgtctg
acctttcaccctaccatccctggtttggtggcttcgggatgtctggatggagaggttcgc
atctgggacctgcatggtggcagtgagagctggttcactgagagcaatgtggccattgcc
tccctggcctttcaccctactgcccagctccttctcatagcaacaaacaatgaggttcac
ttctgggactggagtaggagggagccatttgccctggtcaagactgccagcgagacagag
agagtcagactggtgaggtttgacccactgggtcattacctgttgaccgctatagtgaat
ccctctaaccaacagcagagtgatgatgactcggaggtccccatggatagcgtggagatg
ccccactttcgccatcgatccttcctacagtcccaacctgtccgccgtacacccattctc
cacaacttcctgcacatcctgtcatcgaggaactccggctcacagtctgaggaacagcat
cctcctgcacccgctgccaatagtgctgctgactctcctagtcttccctctggacattat
tctgccctgcgtaatcgctcccgacccccctaccagggttgtgtgcaacaccttggtatg
gtttgcttctgcagtcggtgctctgccacccgagccccttcaccatctggagaggacccc
tctgaccctgagagcctggaggcccagtctcatgcctccaccttctcctctgctcgcact
gagccccggcagccctctgagcctcgctcctcacaccgtccctctgccttcagcagtgtg
tacggcagtgctagaggacactctttacgcactccatcttcaggccctggccagcgcagc
atcccaggccttataaccaaccagggccaccagcagccaggcctggagtgctctgggcga
ctggcaggagcagactggatgggcagcatgctcaacatgcggcctgagcgtagtgggggt
gttggggtatctccacccaggactagtgcatcctctgtcaacctgctgtctgtgctgagg
cagcaggagggctcctttcagtcgcctgtctacacctctaccacagagggaggaagcttg
cccccagcagtagtgagccctcacaccagtggacacagctctgtagatggacccagcact
agtagtggacaccactctcttggggagggagggagcaacagccccacctcgatccgtaac
gtgctgcagtgcaacttgaatcgctacttcatggagtatgatcgcatgcaggaaatggag
cagtcaggtggtgctggtggagagagcagccaagagcaacagacacgggagatgctcaat
aataacatagagtgtgagcggcctgtcaccccccattatcagccccccaacagcagtgat
ggtggttctggtccctcccgcggccatatgaaccgctgcagggtctgccacaacctgttc
acgtttaaccaaggtacacagcgctgggaacgcactggccagaccccatcacaagaggag
gggagcacctcatggcagcccccaagccccaaccctgcctttcacacaatgaggccgacg
gtgctacatgttccccagtcctctgacaggagacagttattacagccacagcccagtgct
gatgaacctggaggggacacagccttcactcaccggggatcccctagctcacagagagaa
caggcggtggggttggtatataaccaggagacaggccagtgggagagagtttaccgaccg
tctgtcagtccaagtccagcggtgaatgtaccacaagaggccttaaaccaagaaatgcct
gacgaaaaccacgatgacgattacctgagaaggaggcttttggagtcctctcttatgtcg
cagtctcgatatgacatatctggctcccgggaccatcctatttatccagatcctgccagg
ttgtcccctgcggcatattatgcccagcggatgattcagtacttatctcggcgggacagc
attcgccaacgatcactgcgctaccagagccgactgcggcctctctcatccacctcagat
agcccaggaagcaacccctccccctccgttgagaacaacgaggtggactttgaggagttt
gaggataacggggatcgtgccagacatagagctccacgcaacgctcgtatgtctgccccc
tcgcttggcagatttgttccccggaggttcctactgcctgagtacctgccatatgctggg
atcttccaccacgagaggggccagcctggcctggccacccattcctccgtcaacagggtc
ctagcaggtgcggttatcggtgacggtcagtcagctgtggccagtaacatcgccaacacc
acctaccgcctccagtggtgggacttcaccaagtttgacctacctgaaatcagcaactcc
tctgtcaacgtgctggtgcagaactgcaagatctacaatgacgccagctgtgacatctct
gcagacgggcagctcctggccgtgttcatacccagcagccagcggggcttcccagatgag
ggcatcctggctatctactctctggcgcctcacaacctgggagagatgctctactccaag
agattcggtcctaatgccatctctgtcagcctgtccccgatgggccactacgtgatggtg
ggcttggcctcccgcaggatcctgctccatcacactacagaccacatggtagctcaagtg
ttacgcctgcagcagccccatggtggagagacttccatgaggagaatgtttgatgtggtg
taccccatggcttctgatcagcggagacacgtcagcatcaactcggcccgctggctccca
gaacctggcttggggcttgcatacggtaccaacaagggagacctagtcatctgcagacct
gtagatgcccagtcagacggagacggccccgctgagcacagtgagcccatatttgctgtc
aacaacaatcgaggcagtggtaccggtgggagccgcgatggagagcgaccagggagcagc
agggcccccttgaggtctgaaagggacatgagacttatgaacgccatcggtctccagccc
cgtcaccctacccccgttgtgacctcacaaggcacacagacacccgtcctacgtcttcag
aatgccgaaacacagactgacctagagccacaggttcccagcacctcccgggcctcccaa
gcaacaaacatcggtggacacataagggaccttcatccaggcagcagcacagaaatggtg
cctgagacacccccgcacacactgcaggaggatggcgagtcagccgaggccttcacagag
gccagcaccaccttggctaacccaggggaatctcaagagcagggcagtggggaggatgcc
gtttctcggcttcgaaggctgattgccgagggtggtatgacggccgtggtccagagggag
cagagcaccaccatggcctccatgggtagcttcggtaacaacattatcgttagccaccgc
atccaccgtggctcccagactgggacagaggctcaggatgggggcagagacactcagggc
aggggtcagggtcttgatggaggtggttgggcgtccttctctccatcccaccgcggcact
ctgtcgttcacagagcccacctctcgtattctgacccaccacagcatgcagctgggcgag
agctcaggcttcctgttagagccctctggggcccatagccgaacagtagcacctctcccc
tcccagtacatcacagtctcttctcatctcagccctcaggggccaattggggtggaggag
ggggccgatgagacccctatggacacagacgatgcgtttgagggtgtgggacttgtcgat
gatctagatctacacttgccctctgcttcctcctcttcttcaaccctgtcccctgttgtc
tcccctcttgacaacaacttcagcaccagttaccatggagacccctacagtcgatag
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