Oncorhynchus tshawytscha (Chinook salmon): 112249015
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Entry
112249015 CDS
T05605
Name
(RefSeq) PHD finger protein 21A isoform X1
KO
K24651
PHD finger protein 21A
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112249015
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
BRAF-HDAC complex
112249015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD
C1_2
zf-HC5HC2H
AT_hook
DUF2197
Baculo_PEP_C
PHD_2
ADDz_Dnmt3b
S6OS1
C1_1
DUF4795
Motif
Other DBs
NCBI-GeneID:
112249015
NCBI-ProteinID:
XP_024274354
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Position
LG04:54442958..54481767
Genome browser
AA seq
765 aa
AA seq
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MQNWMVFKTEDCVKAESCPGLSFRQKGSMMELQTLQESLKADIQVHQKLVSQMKQDPQNA
DLKKQLHERQAKITALSEQQKKVVEQLRKELLVKQDHLEVQAHQQPQHPVQPDGKASALP
NLHTPPSLPSPDKLSTPQNTMTITPVIATKTLPLVLKAATATMPASAVTPRPSVAKVTAI
SNTPKASIGHPDSLSSPINLQTSSKLTNQGMEPVRIVSKNTVVVQATAQPIKVPQFIPPP
RLMPRPTFVPQVRPNPATPTPTSTVPIAPAPPPPMLAAPQLLQRPVMLTTKLTSTSLAST
TGPIHQVRIVNGQPCASITKTLPSAQLTGIVITSPATITATTPLATHQTLQIRSLSPDTK
TVKARGVTEPKTSASAPSSPSHATRGTPPPLLRNKREDNPQKLAFMVSLGLVTYDHLEEI
QSRRQERKRRTTANPVYSGAVFEPERKKNGVTYLNTPLHQGTRKRGRPPKYSSVPELGLH
TPTSPTSSHSASPAHHRPERGGSHFPVHPHTLPLPSPNSGDGDIHEDFCTVCRRSGQLLM
CDTCARVYHLDCLAPPLKTIPRGMWICPKCHDQILMKDEAIPWPGTLAIVHSYIAYKAAK
EEEKQKLVKWSLELKQDREQLEQRVKQLSQSITKCMENKNTILARQRDMHNSLEKVKGLV
HLIQGINFCPSPEVSPPAVQTSMTNGGTDGASSDHTGDTSPEDHKNMTDNSSDDLNNNTD
GATEEEGKKEDVKEMDNLNSSSLGKTLEPPQTIAPALVDVAEGAK
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaattggatggtgttcaaaactgaagactgtgtgaaggctgaaagctgtccagga
ctgagcttccgacagaagggatcaatgatggaattacagaccctccaagagtccctgaaa
gcggatatacaagttcatcagaaactagtgtcccaaatgaaacaggatccacagaatgct
gatttgaagaagcagctccatgaacgtcaagccaagatcacagcgctgagtgagcagcag
aagaaggtggtggagcagctgaggaaagagctgctggttaaacaggatcatctggaggtc
caggcccatcagcagccccagcacccagtgcagcctgatgggaaggcctctgccctgcct
aacctccacaccccaccctccctgccctcgcctgacaaactgagcacgccacagaacacg
atgacgatcaccccggtcatcgccaccaagactctacctctggtactgaaagctgccact
gctaccatgcctgcttctgccgtgacgccgcgaccctccgttgccaaggtcacagccatc
agcaacacgcccaaggccagcataggtcaccctgactcactgagttcacctatcaacctt
cagacatccagcaagttgaccaatcagggaatggagccagttcggatagtctccaagaac
actgttgttgtgcaggccaccgcccagcctatcaaagttcctcagtttatccctccacct
agactgatgcctcgacctacctttgtaccgcaggtccgaccaaacccagccacacctaca
cccacttccacggtgcccatcgcccctgcgccccctcctcccatgctggctgcccctcag
ctcctccagcggcctgtcatgttgaccaccaagctgacctccacctcactggcctccacc
accgggcccatccaccaggtacgcattgtaaacggccagccctgcgccagcattaccaag
accctgccctctgcccagctgactggcatcgtcatcacctcgccagccaccattacggcc
accacccccctggcaacacatcagacgcttcagatcagaagcctcagccctgacaccaag
actgttaaagctcggggtgttaccgagccgaagacatcggccagtgcgccctcctccccc
tcacacgccactagaggcacccctccacccctgctgaggaacaaaagagaggacaacccc
cagaaactagccttcatggtgtccttgggacttgtgacatatgaccatctggaagagatc
cagagtcggaggcaggagcggaagcggagaacaacagcaaatccggtatacagtggagca
gtgtttgagccggagcgtaagaagaacggcgtcacatacctgaacactcctctacaccaa
ggcaccaggaagagaggtcgcccacccaaatacagcagtgttcctgagctgggtcttcac
accccaacatcccccaccagcagtcattccgcctccccggcccaccaccggccagagagg
gggggctctcacttccccgtccacccccacaccctccctctgcctagccccaactccggg
gatggagacatccatgaggacttctgcactgtgtgcaggcgcagtggtcagttgctcatg
tgtgacacatgtgcacgtgtttaccatctggactgcctcgctccacctttgaaaaccatt
cccaggggcatgtggatctgccccaaatgtcacgaccagattttgatgaaagatgaggca
atcccatggcctggaaccctcgctatcgttcattcctacattgcatataaagcagctaaa
gaggaggagaagcagaaactggtgaagtggagcttggaactgaagcaggacagagaacaa
ctagaacaaagggtcaaacagctgagccaatccataacaaaatgcatggagaacaagaac
actatcctggcccgtcagagggacatgcacaactccctggagaaggtcaaaggcctggtg
catctcattcagggcatcaacttctgcccatcccccgaggtctcgccgccagcggtccag
accagcatgacaaatggaggaacagacggtgccagttctgaccacacgggcgacacaagt
cctgaggatcacaagaacatgactgacaatagcagcgacgacctgaacaacaacacagac
ggggcgaccgaggaggaagggaagaaagaggacgttaaagagatggacaacctcaacagc
agcagccttggcaaaaccttagagcctccccagactatagcaccggcccttgtggatgta
gcagagggggccaaataa
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