Oncorhynchus tshawytscha (Chinook salmon): 112249029
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Entry
112249029 CDS
T05605
Symbol
psmc3
Name
(RefSeq) 26S proteasome regulatory subunit 6A isoform X1
KO
K03065
26S proteasome regulatory subunit T5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
112249029 (psmc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
otw03051
]
112249029 (psmc3)
Proteasome [BR:
otw03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
112249029 (psmc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Prot_ATP_ID_OB_C
AAA_5
nSTAND3
RuvB_N
AAA_16
AAA_2
AAA_22
DUF815
DUF5827
Mg_chelatase
AAA_33
PhoH
IstB_IS21
AAA_7
AAA_24
CCDC22_CC
AAA_28
ATPase
NPHP3_N
Sigma54_activat
Golgin_A5
AAA_14
RNA_helicase
Parvo_NS1
AAA_11
Defensin
Motif
Other DBs
NCBI-GeneID:
112249029
NCBI-ProteinID:
XP_024274391
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Position
LG04:54584262..54599969
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AA seq
427 aa
AA seq
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MASLNDRSVWDEVEDGIGEEVLKMSTEEIVQRTRLLDSEIKIMKSEVLRVTHELQAMKDK
IKENTEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDLDSQRKGKCAVIKTSTRQTY
FLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLD
KQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLA
GPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLE
LLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRK
MNVSPDVNYEELARCTDDFNGAQCKAVCVEAGMIALRRGATELNHEDYMEGILEVQAKKK
ANLQYYA
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgctgaatgacagatcagtttgggatgaggtggaggatgggatcggcgaagaa
gtcctcaaaatgtccaccgaagagatcgttcagcggacacgtcttctggacagtgaaata
aagatcatgaagagtgaggtattgagggtaacccatgagctgcaggccatgaaggacaaa
atcaaagaaaacacagagaagatcaaagtgaacaagaccctgccgtacctggtctccaat
gtcatcgagcttctggatgtggacccaaatgaccaggaggaagatggagcaaacattgat
ctagattcccaaaggaagggcaaatgcgctgtcatcaaaacatctacaagacagacatac
ttcctcccggtcattggcttggtggatgcagagaagctgaagccgggagacctcgtgggt
gtaaacaaggactcatacttgatcctggaaaccctgcccacagagtatgactccagagtc
aaagccatggaggtggacgagcgccccactgaacagtacagtgacattggtggattagac
aaacagatccaggagctggtggaagcaattgttctgcccatgaaccacaaggagaagttt
gagaacctgggtattcagccacctaagggggttttgatgtatggccccccaggcacaggg
aaaaccctactggctagggcctgtgctgcccagaccaaggccacatttctcaagctggct
ggcccacagctggtccagatgttcattggtgatggtgccaagcttgtccgagacgccttt
gccctggccaaggagaaggccccctctatcatcttcatagatgagctggacgccattgga
accaaacggtttgacagtgagaaagcaggtgacagggaggttcagagaactatgcttgag
ctcctcaaccagctggatgggttccagcccaacatgcaagttaaggttattgctgccact
aacagggtggatatcctagatcccgcactgctgcgttctggacgtttagaccgtaagatt
gagttcccaatgcccaatgaggaagcacgagcccgcatcatgcagattcactcacgcaag
atgaacgtcagccctgatgtcaactacgaggagctggccaggtgcactgatgatttcaat
ggcgcccagtgcaaagcagtgtgtgtggaggcgggtatgatcgcccttcgcaggggggca
actgagctcaatcatgaggactacatggaaggcatcttagaagtacaggccaagaaaaag
gccaacctgcagtactacgcctaa
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