Oncorhynchus tshawytscha (Chinook salmon): 112249103
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Entry
112249103 CDS
T05605
Name
(RefSeq) B-cadherin-like isoform X4
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04371
Apelin signaling pathway
otw04514
Cell adhesion molecules
otw04520
Adherens junction
otw05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
112249103
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
112249103
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
112249103
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
112249103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112249103
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
otw04515
]
112249103
04090 CD molecules [BR:
otw04090
]
112249103
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
112249103
Cell adhesion molecules [BR:
otw04515
]
Cadherins
Major cadherins
112249103
CD molecules [BR:
otw04090
]
Proteins
112249103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Cadherin_4
DUF1366
BACON_2
Motif
Other DBs
NCBI-GeneID:
112249103
NCBI-ProteinID:
XP_024274524
LinkDB
All DBs
Position
LG04:59135203..59186571
Genome browser
AA seq
881 aa
AA seq
DB search
MGAFWFVELGVLILFLQAFRPGSSESKCLPGFNSEIYIFKVERYHLQSGRRLGKVVFDDC
TSRTSFLFHSEDSRFKVDGDGTLKLKRGLTLHNGHKEFYVSTQSKGKKITVPVRVLHEAR
HDHHHNHHEMTNQPKPGESLSLPVLNFPKSSGGLKRRKRDWVIPPINFPENDRGPFPKNM
VQIKSSNDKEVKIQYSITGTGADLPPVGLFTVDKNSGILYVTQPLDRERKDQYILLAHAV
AVGAGIAEDPMEIIVKVIDMNDNKPVFTQDPFTGTVPEASKPGDEVMQVTATDADEEGSA
NSDVRYTILSQEPPLPSPNMFVINPVTGGIRVNAPGLDREKFTKYTLAIQAADMEGNGLT
SFGKAIITVTDSNDNAPQFVTPSYTVSVPENKVDALVVKMPVTDGDEPHSSAWATTYKIV
DGDPQGLFSVSTGPSKLEGIITTAKPLDFEKNSKYTLLVTVQNEVPFAISLPTSTATVVV
NVEDVNEAPVFTPVEKIIRKPEDLPVDSDLVLYTATDPDTARNQKVTYKIRNDPAGWLSI
NKDTGLIKVKSLMDRESTFVQDNKYSVIVLGIDNDEIPATGTGTLIIELEDVNDNAPTID
ESVIRVCNKESSPQLLSVTDKDSAGFAAPYTVQLQGPSHSNWTARMNDTKTGIILTLKTV
LDSGDYMVVLRVSDNQGLHHDSTIQASVCDCKGADVQCTDKAVAGFGISSILGILGAVLL
LLLLSLLLLMFLRKRGGEKKEPLLQEDDVRDNIYYYDEEGGGEDDQDFDLSVLHRGLDNR
PDVFRNDIAPTMARPEYRPRPANPADIGNFIDDNLKAADNDPTAPPYDSLLVFDYEGGGS
EAGSLSSLNSSNSGGDQDYDLLQEWGPRFKKLSDMYGGGED
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgggggcattttggttcgtggagttgggcgtattaatattatttctccaggctttcaga
ccagggtcgtcggagtcaaaatgtctaccaggtttcaattcagaaatatacattttcaaa
gtggaaagatatcacttacaaagtggccggagactaggaaaagtggtttttgatgactgc
accagccgtaccagctttctctttcactccgaggattcacgcttcaaagtagatggcgac
gggacgctgaaactgaagagggggctgactctgcataatggacataaggagttctatgtc
tctacccagtccaagggcaagaagatcacggttccagtcagagtgctgcatgaggccaga
catgaccaccaccacaatcaccatgagatgaccaaccagcccaagccaggagaaagtctg
tctctacctgttctgaacttccccaagtcttcaggaggtctgaaaagaaggaagagggac
tgggtcattcctcccatcaacttcccagagaatgaccgaggcccgttccccaagaatatg
gtgcagatcaagtccagcaatgataaagaggtgaagatccagtacagcatcactggcact
ggggcagacctacctcctgtgggactcttcactgtggacaaaaactctggaatactctat
gtgacccagcctttggacagggagagaaaagaccaatacattctcctagcccatgctgtt
gcagtgggtgcaggtatagctgaggatcccatggagatcattgtgaaagtcatcgatatg
aatgacaacaaacctgtatttacccaagatccatttacgggaacagttcctgaagcatca
aaaccaggtgatgaggtcatgcaggtaacggccactgatgctgatgaggagggctctgcc
aattctgatgtcagatacaccattctcagtcaggagcctccactaccaagccccaacatg
tttgtcatcaaccctgtgactggagggattcgggttaacgcacctgggttggacagagag
aaatttaccaaatatactttggcaatccaagctgctgatatggagggaaatggccttacc
agctttggcaaagccatcattacagtaacggacagcaatgacaacgcgccacagtttgtg
acgccttcgtacactgtgtcagtcccagagaataaagtggatgccttggtggtgaaaatg
ccagtgactgatggagatgagcctcactcctctgcctgggccaccacctacaagatagtt
gacggggaccctcaaggccttttcagtgtgagcacaggccctagcaagctggagggcatc
attacaaccgctaagccgcttgactttgagaagaacagcaagtacactctgctggtcact
gtgcagaatgaagtcccattcgcaatcagcctgcccacctccactgctactgttgtagtg
aatgtggaggatgtgaatgaagctccagtcttcaccccagtggagaagattatcaggaaa
cctgaggacctccctgttgacagtgacctggttctgtacaccgccacagacccagacact
gcaaggaatcagaaagtcacatacaagatacgaaatgatcctgctggatggctaagtatc
aacaaagacactgggctgatcaaagtcaagagcctcatggacagagaatccacttttgtc
caagacaacaaatactctgttattgttctgggtatcgacaacgatgaaatcccggcaact
ggcactggcacccttatcatagagctggaggatgtgaatgataatgctccaaccattgat
gagagtgtgatcagggtctgcaacaaggagtcctccccacagctgctgtcagtcactgat
aaagacagcgcgggctttgctgctccatacaccgtacagcttcaggggccgtcccattct
aactggactgccagaatgaacgacacaaagactggcattatcctgacactgaagactgtg
ttggacagtggagattacatggttgtcctgagagtgtctgacaaccagggcctgcaccat
gacagcaccatccaggcctccgtgtgtgactgcaaaggagcagatgtccagtgtaccgat
aaagctgtagcaggcttcggcatctctagcattctgggaattctaggagcagtcttacta
ctcctattgttgtcacttctgctgctcatgttcctgcggaagagaggtggtgagaagaag
gagcctctgctgcaagaggacgatgtcagggacaacatctactactatgacgaggaggga
ggtggcgaggatgaccaggattttgacttgagtgtcctgcacagaggtctggataaccgt
cctgatgttttccgtaatgacatcgctccaaccatggcccggccagagtatcgtccacga
cccgccaacccagccgacattggcaacttcattgatgataacctgaaggcagctgacaac
gaccccactgcccctccctacgactccctcctggtgtttgactatgaaggaggtggctct
gaggccggctccctcagttccctcaactcctccaactcaggaggcgaccaggactacgac
ctccttcaagagtggggcccgcgcttcaagaagctgtctgacatgtacggaggaggagag
gattga
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