Oncorhynchus tshawytscha (Chinook salmon): 112249106
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Entry
112249106 CDS
T05605
Name
(RefSeq) piezo-type mechanosensitive ion channel component 1
KO
K22128
piezo-type mechanosensitive ion channel component 1/2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112249106
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
112249106
Membrane trafficking [BR:
otw04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
112249106
Ion channels [BR:
otw04040
]
Other channels
Mechanosensitive channel (Piezo)
112249106
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piezo_RRas_bdg
PIEZO
FAM210A-B_dom
Motif
Other DBs
NCBI-GeneID:
112249106
NCBI-ProteinID:
XP_024274527
LinkDB
All DBs
Position
LG04:complement(59224074..59304976)
Genome browser
AA seq
2552 aa
AA seq
DB search
MELQVVCGLLYCILLPTFLLAACLFRYNALSLVYLLYLLLLPWFLWPNKHTLRGHTGRFI
KALFCTSLLFLLAHVSFQICLYTIPDLDHALGNNCSLWDTLSRHVGVSRLPLDDPWSVVR
LLTPDLGVFVISLVTLVVCNRLVKRRDDVTFLPVASDSTQGTEDGSETKEGEEEEEEEED
EEGISSPSEPGDDVVSAATRAKQLAARLRVTAQKVLRDLGRILAITLLALAGITLPSAFS
AIYFLLFIGVCTWWACHFPISHLGFNVLCVMVGFFTAGHLVCLYLYQCPIAQGIFPPASL
WARLFGLKDIIKPGNCSASYDLILNTEHDWPVYVNPGILLLLSITVATVLKISSHHGSAD
KGEEGAQLVKGTEAGGGEDVELKPWSAQRQPSQDDTENTLLSIERTGDRVTNSSSHQDLG
PGLSSAPDGQHGDHPLQLLGRVVMQQSYVCALIAMMVWSITYHSWLTFVLLLWACLIWML
RARRHFATLCSPFILLYGLALCFLQYVWAMDLQPELPRTVGTMSLRQLGLDRAQYPCLRL
GAMLLYTLTFWLLLRQSVKDNFSRKKGRSAPLQEVTTGEGSGQNESVLKVVGRLVMSCYA
KYWIYVCGGMFIMVSFAGKLVGYKIIYMLLFLLCLCLYQVYYSLWRRLLKVFWWLVVAYT
MLVLITIYTFQFEDFPAYWKNFTGFTEEQLADIGLETFKLTELFTSILIPGFFLLACILQ
LHYFHKPFMRITDLDHVTPIHRKRNRHRPEVRRCDDGAVFEEDDLVTDLRDDESEEDEMM
PSKWGLVMNRLIVLFRKFSDTLTQIQVLIWRVLELHILKMVAFFVVWVALGEPSVMNLVL
VVLWAFAMPYTRFRHMACCLSTVWVCIIIVCKMLYQLSIVDPVEYSNNCTVPLANETNLK
DAEVLNSTLYREPVDPANWFGFRKDATVLGYSKNHLLVLMLLVFEATVNRHQDHHYRQQQ
RSPPLIPAIFPQATRDTLDQGLLACIKYLLNYSFYKFGLEICFLMMVNVIGQRMNFLVII
HSCWLVAIMVRRRRAAIAQIWPKYCLFLSIFMIYQYILCVGIPPALCIDYPWRWNTPVII
NSALIKWIYLPDFYTIPNSKNLIADFVLLMCASQQWKVFEDEKREEWMVLAGENTDDPNP
MDDRPFNPAPNFINCRCYLDMSKVLVFRHMFWFVLSVVFVTGATRISVFGLGYLLACFFF
LLFGTKLLRKPSRTRLVMWDCLIIYNVAVIISKNMLSILACVFVLEMQKSFCWVIQLFSL
VCTVKGYYDPKSVSEKVCTLPVEEAGIIWDSICFFFLLLQRRVFLSCYFLHVTADLQASA
RQASRGFELFRASIVKNMRFHQEVEKKSLSQLKRSMERILSKQEKCKEGRRKSDTKADPA
SEPQREKRSHKRGKKWQEPWLDHAKVLHSGDYYLFESDSEEEDELFSEEKKPQKQTAFQL
AYRAWVTSAKATLRERQERQKEQRRLEREERRQRKQDSSPASGHEGSLEFEESISHEEID
DNDELDGEGSGKADIVQRILDVLMLLWVVFLAMVDGLTEWLNLITKQYVDTSTVLCNERY
HLIHNVSQGSLREPMEDQLSQGSESPTMETCLGDIEGDTDHVNRTSATSGLELVELSERE
HHSGTTLCCSEPTLELLGVEPEPQHKSRYRHSRTASEMLTDRQFFVEELVQCREFYSSQN
RLLKLQFALYNLLAANSELVCYFIIVLNNMVTASVISVVLPILIFLWAMLAVPRPTKKFW
MTAIVYTEVMVVVKYLFQFGFFPWNSVYELTLNEDKPFFPPRILGLEKTDNYIRYDLLQL
LALFFHRSLLQRYGLWDQECALEEKPSRPSEEANKKEGGEGEGVEVHVHPSPGPSLMDLE
ELKPDEDQKAKPEPEPEPSTSVAPTPEAPPSLPVVGPKKKGSIMRFRKKKLLSKEALDIK
AEKKEQKKKQKGKRREAASKKLIAAGEKIKHLTITAVRNVYKPCHEFFSDILHAPYRAAT
DVYALMFLTDVVDFIIIVFGFWAFGKHSAAADIASTLSEDQVPEAFLVMLLIQFSTMIID
RALYLRKTVLGKLIFQIILVFGIHLWMFFILPAVTERMFSQNSVAQLWYFFKCIYFALSA
YQIRCGYPTRILGNFLTKKFNHLNLFLFQGFRLVPFLVELRAVMDWVWTDTTLSLSNWMC
VEDIYANIFIIKCSRETEKKYPQPKGQKKKKIVKYGMGGLIIFFLICIIWFPLLFISLVR
SVVGVVNHPVDVTVTVKLGGYEPLFTMSVQQQSIQSFTEEDYNKLTTNFYDNARAMQFIT
LYSYEDIVTAKIEGSSGSVWRISPPSRQEVVKELLGSPVDMTLRLAWTFQRDLGKGGTVE
HTSDKYSINLDPGNPVRADLASLLVGNRTDPVRVPHMFPNYIRAPNGAEAKPVDQLYKGD
EDGYQDITLSLMRDRSLNSTRGAQEWWDISIADCTPSKGACGVLPMVIFNDKVSPPSLGF
LAGYGIMGLYVSVVLVIGKFVRGFFSEISHSIMFEELPCVNRILKLCTDIFLVRETGELE
LEEELYSKLIFLYRSPETMIKWTRDKLSSDNR
NT seq
7659 nt
NT seq
+upstream
nt +downstream
nt
atggagcttcaggtggtatgtggactgctctactgcattctgttgccgacgttcttgtta
gcagcctgcctgtttcgctacaatgccctgtctctggtctacctgctctacctgctgcta
ctgccatggttcctgtggcccaacaagcacacactacgaggacatactggacgtttcatc
aaggctctgttctgcaccagtctcctcttcctgctagcccatgtctccttccagatctgc
ctgtacactatccctgacctggaccatgcactgggaaacaactgtagtttgtgggacaca
ctatcgaggcatgtcggtgtatccaggctgcccctggatgacccgtggagtgtggtgcgt
ctgctgacccctgacctgggggtgtttgtgatctccctggttaccctggtggtgtgtaac
cggctggtcaagaggagagatgacgtcactttcctgccggtagcctccgactccacacag
gggacagaggatgggtcagagacaaaggagggtgaagaggaggaggaagaggaggaagat
gaggaaggcatttcgtcgcccagtgaacctggggatgatgtggtttctgcagcaactcgt
gccaagcagctggcggcccggctccgagtcacagcccagaaggtcctgagggacctgggc
cggatcctggccatcaccctgctggctctggctggcatcaccttaccctcggccttctct
gcaatctacttcctgcttttcatcggcgtgtgcacgtggtgggcctgccactttcccatc
agccacctaggcttcaatgtgctgtgtgtgatggtgggctttttcacggcgggccacctg
gtgtgtctctacctgtaccagtgccccattgcccagggcatcttcccccctgccagcctg
tgggccagactgtttggcctcaaggatatcatcaaacctggcaactgctccgcctcctat
gacctcatccttaacacggagcatgattggccggtgtatgtcaaccccgggatcctgctt
ctcctgtccatcaccgtggcgacggtcctgaagatcagcagccaccatggatcggctgac
aagggtgaggagggggcccagcttgtcaaaggaacagaggctggaggaggagaggatgtg
gaactgaagccctggtccgctcagagacaacccagccaggacgacactgagaacacgctt
ctgtctatagagcgcacaggagatcgcgtcaccaatagctccagtcatcaggacttgggc
ccagggctcagtagcgcccctgatggacagcacggggaccaccctctgcagctgctgggt
agagtggtcatgcagcagagctacgtgtgtgctctcatcgctatgatggtgtggagcatc
acctaccacagctggctgactttcgtgctgctgctgtgggcgtgtctgatctggatgcta
cgtgcgagacgccacttcgccacgctgtgctctcccttcatcctgctctacggcctggcc
ctctgcttcctccagtacgtctgggccatggacctgcagccggagctgccccgtaccgtg
ggcaccatgagccttaggcagctgggtctggaccgagcccagtacccctgcctccgcctg
ggggccatgctgctgtacacgctgacgttctggctgctcctacgccagtcagtgaaggac
aacttcagcaggaagaagggcaggtctgcccctctacaggaggtcaccactggagagggg
agcgggcagaacgagtcggttctgaaggttgtgggcagactggtgatgagctgctatgcc
aagtactggatctacgtgtgtggaggcatgttcatcatggtcagcttcgctggcaagctg
gtgggctacaagatcatctacatgctgctcttcctgctttgcctctgtctctaccaggtg
tactactctctgtggaggaggctgctcaaggttttctggtggctggtggtggcctacacc
atgctggtccttatcaccatctataccttccagtttgaggacttccctgcctactggaag
aacttcaccggcttcactgaagagcagctggctgacatcggcctggagacctttaagctg
accgagttgttcaccagcatcctgatcccaggcttcttcctgctggcctgcatcctgcag
ctgcactacttccacaaaccctttatgaggatcacagacctggaccacgtcacgcccata
cacaggaagaggaacaggcacagaccagaggtgcgccgctgtgatgatggggctgtgttt
gaggaggatgacctggtgacggatctgagggatgacgaatcagaggaggatgagatgatg
cccagtaagtggggtttggtgatgaacaggctgatagttctgttcaggaagttctctgac
acgctgacccagatccaagtgttaatctggagggtcctggaactgcacatcctcaagatg
gtggcctttttcgtggtctgggtagctctgggagagccgtctgtgatgaacctggttctg
gtggtgctctgggcgtttgccatgccctacacccgcttccgccacatggcttgctgtctg
tccaccgtctgggtctgcatcatcattgtctgcaagatgctctaccagctcagcatcgtc
gaccctgtcgagtactccaacaactgcactgtgcccttggccaatgaaaccaatctgaaa
gatgctgaggtcctgaactccactctgtacagagagcctgtagacccagccaactggttt
ggcttcaggaaggatgccaccgtgctaggctatagcaagaaccacctgctggtgctgatg
ctgctggtgtttgaggccacagtgaaccgccaccaggaccaccactacaggcagcagcag
aggtcccctcccctcatcccagccatcttcccccaggccaccagagacaccttggaccag
ggcctgctggcctgcatcaagtacctactcaactacagcttctacaagtttggcctggag
atctgctttctgatgatggtgaatgtgattggccagcggatgaacttcctagtcataatc
catagctgttggttggtggccatcatggtacggcgtcgccgggcggccatcgctcagatc
tggcccaagtactgcctgttcctcagcatcttcatgatctaccagtacatactgtgtgtg
ggcattccccctgcactctgtatagactacccctggcgatggaacacccccgtcataatc
aactcagcactcatcaaatggatctacctcccagacttctacaccatccccaactccaag
aacctcattgcggactttgtcctcctgatgtgtgcctcccagcagtggaaggtgtttgag
gatgagaagagggaggagtggatggttctggctggggagaacacagacgaccctaacccc
atggacgatcgacctttcaaccctgcccccaacttcatcaactgcaggtgttacctggac
atgagcaaggtgctggtgttccgtcacatgttctggtttgtcttgtcggtggtgtttgtg
accggggctaccaggatcagtgtgttcggcctgggctacctgctggcctgcttcttcttc
ctgctcttcggcaccaagctgctcaggaagccctcccgtacgcgcctggtcatgtgggac
tgcctcatcatctacaacgtggccgtaatcatttccaaaaacatgctgtctatcttggcc
tgtgtgtttgtgttggagatgcagaaaagtttctgctgggtgatccaactcttcagtctg
gtctgcacagtgaagggttactatgaccctaagagtgtgagcgagaaggtgtgtactctg
cctgtagaggaggcaggcatcatctgggacagtatctgcttcttcttcctcctgctgcag
aggagagtgttcctcagctgctacttcctgcacgtgacagccgacctgcaggcctctgcc
cgccaagcctcccggggctttgagctgttcagggccagcattgtgaagaacatgcgcttc
caccaggaagtagagaagaagtccctctcgcagctcaagagatcgatggaacggatcctc
tccaaacaggagaagtgtaaagagggccgtcggaaatcggacaccaaggcggatccggca
tcagagccacagagggaaaagagaagccacaagcgtggcaagaagtggcaagagccctgg
ctggaccatgctaaagttttgcattctggggattactacctgtttgagtcggacagtgag
gaggaagacgaactgttttcagaagaaaaaaagcctcagaaacagactgcctttcagctg
gcgtatcgggcttgggtgaccagcgccaaggcaacgctgagggaacgtcaggaaagacag
aaagaacagaggaggctggaaagagaggagagacggcagaggaaacaggacagttctcca
gcatcaggtcatgaaggtagtcttgaatttgaagaaagcatttcacatgaagagatagac
gacaatgacgaacttgatggagagggctcagggaaggcagacattgtgcagaggatcctg
gacgtcctcatgttgctgtgggtcgtgttcctggccatggtggatggcctaacagagtgg
ctcaacctcatcaccaagcagtacgtggacacctccaccgtgctgtgcaacgaacgctac
cacctcatacacaacgtcagccagggatctctgagggagcccatggaggatcagctgtcc
cagggcagcgagagccccactatggagacctgtctgggagacatagagggagacacggac
cacgtgaatagaaccagtgccaccagtgggttggagctggtggagctgagcgagcgtgag
catcacagcggcaccaccctgtgttgttcagagcccactctggagctgctgggggtggag
ccagaaccacagcacaaaagccgctaccgccactccaggaccgccagcgagatgctcact
gaccggcagttctttgtggaggagctggtccagtgtagagagttctactcctctcagaac
cgtctgctgaagctgcagtttgccctgtacaacctcctggctgccaactcagagctggtg
tgctacttcattatcgtgctcaacaacatggtgacggcctctgttatctcagtggtgctg
cccatcctcatcttcctctgggccatgctggccgtgccacgccccaccaagaagttctgg
atgaccgctattgtctacactgaggtcatggtggtggtaaagtacctgttccagtttggt
ttcttcccgtggaacagtgtatatgagctcacgctgaacgaggacaagcctttcttccca
cctcgtatcctgggcctggagaagacggataactacatccgctatgatctgctgcagctg
ctggctctcttcttccatcgctcactgctacagcggtatggcctgtgggaccaggaatgt
gctctggaggagaagccctcacggccatcagaggaggccaacaagaaggagggaggagag
ggggagggggtggaagtccatgttcatcccagcccaggacccagcctcatggacctggag
gaactcaaaccggacgaggaccagaaggccaaaccagagcctgaaccagagcccagcacc
agcgtagcccctaccccagaggcgccccccagtctgccagtggtgggacccaagaagaag
ggcagcatcatgcgcttccgcaagaaaaaactattaagcaaagaagccttagatatcaag
gctgagaaaaaggagcagaagaagaaacagaagggtaagcgtagagaggcagccagtaag
aagctgatagcagcgggagagaagatcaagcacctcaccatcacagctgtacggaatgtc
tacaagccgtgtcacgaattcttcagcgacatcttacatgcaccgtaccgtgctgccact
gatgtctacgccctcatgttcctcactgacgtggtggatttcatcatcattgtctttggt
ttctgggcctttggaaaacactcggccgcagcagacattgcctccacgctgtcagaggac
caggtgcccgaggccttcctggtgatgctgctcatccagttcagcaccatgatcatcgac
cgagccctctacctccgcaagaccgtcctgggcaagctcatcttccagatcatcctggtg
ttcggcatccacctctggatgttcttcatcctgcctgctgtcactgagaggatgttcagt
caaaactcggtggctcagctctggtacttcttcaagtgtatctactttgccctttcggcc
tatcagatccgctgtggctaccccacccgaatcctgggcaacttcctcactaagaagttc
aaccacctcaacctcttcctcttccaagggttccgcttggtgcctttcctggtggagctc
cgggcagtgatggactgggtgtggactgacaccactctgtccctctccaactggatgtgt
gtggaagacatctacgccaacatcttcatcatcaagtgcagccgtgagacagagaagaaa
taccctcagcccaaaggccagaagaagaagaagatagtgaagtatgggatgggaggactc
atcatcttctttctcatctgcatcatctggttcccgctgctcttcatctcgttggtcaga
tcggtggtgggcgtggtcaatcaccctgtggatgtcacagtgaccgtcaagctgggagga
tatgagcccttgttcaccatgagtgtccagcagcagtccattcagtccttcactgaggag
gactacaacaaactcaccaccaacttctatgacaatgctagggctatgcagttcatcacc
ctctacagctatgaggacatagtgacagctaagatcgagggcagctcagggtcagtgtgg
aggatcagcccaccaagtcgacaggaggtggtcaaggagctgctgggcagccctgtggac
atgaccctacgcctggcctggaccttccagagggaccttggcaagggtggcactgtggag
cacacgtctgacaagtactccatcaatctggatccaggcaacccggtcagagcagacctg
gcttccctgctagtggggaaccgcacagacccagtacgtgtgcctcacatgttccccaac
tatatccgagcaccaaacggcgccgaggccaaaccagtcgaccagctgtataaaggtgat
gaggatggctaccaggatataacactgtctctgatgagggaccgctctctgaacagcacc
cgtggggcccaggagtggtgggacatcagcatcgccgactgtactccgtccaaaggggcc
tgcggcgtcctgccgatggtcatcttcaatgacaaagtcagcccccccagtctaggtttc
ctggcaggatatgggatcatggggctgtatgtgtctgtggtgctggtgattgggaagttt
gtgaggggcttcttcagtgagatctctcactccattatgtttgaggagctgccctgtgtt
aatcgtatcctcaagctatgcacagacatcttcctggtcagggagacaggagagctagag
ctggaagaggagctctactccaaactcatcttcctctaccgctcaccagagactatgatt
aagtggacaagagacaagctatcaagtgacaatcgctag
DBGET
integrated database retrieval system
