Oncorhynchus tshawytscha (Chinook salmon): 112249133
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Entry
112249133 CDS
T05605
Symbol
apba2b
Name
(RefSeq) amyloid-beta A4 precursor protein-binding family A member 2 isoform X1
KO
K20055
amyloid beta A4 precursor protein-binding family A member 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112249133 (apba2b)
Membrane trafficking [BR:
otw04131
]
Endocytosis
Clathrin-mediated endocytosis
LDLR adaptor proteins
112249133 (apba2b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PID
PDZ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
112249133
NCBI-ProteinID:
XP_042176887
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Position
LG04:59941340..60007835
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AA seq
872 aa
AA seq
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MAYKQPAPAMAHRKRPGTSGSSCSMVEPPVRTPCPAAYPLEQHDQEQEEGPGEEEEVHYC
RQQGLEPELTDSRPDTPTTPEPQHEHEHSHDHDHPDCHGHDDHSHSDDHAECHGHDHEHA
DCHDHGHSHDDVDCHDHGHVNDHDLAGCHGHRHDHADSLDGDSSSDYVNNTSEEEDYDEG
LPEEDEGITYYIRYCPEDDSYLEGSIDCNEGEADYTASTVQHVRAEPPGDTDECQEAVEE
WVEGEGGVGEVRCEVVEQDPDEQIYDVLDHHPHPAAVLHESPPPTEEEEEEVRAGVAYTG
DYYGPEEENGNSVVHESRSPYRGRKVVVEGETGEEAEEDIDQIVAEIKMSMSMGSLSSGG
TDQSPDELVQDSVPSDYHPPEAHAKPEPAPYTPTPHRHDSRPKSLNLPSSTRHNNPELQR
GFKVRSRTPEERQQWAQEQMTNGAEHPRKQQRSDLNVPLENNNVPEETKKAASFPSFVDV
PGPCEPEDLIDGIIFAANYLGSTQLLSERNPSKNIRMMQAQEAVSRVKRVQKAAKIKKKA
SPEGDAQTLTEVDLFISTLRIKVLNADTQETMMDNALRTISYIADIGNIVVLMARRRMPR
TASQDCIETTPGAPEVKKQYRMICHVFESEDAQLIAQSIGQSFSVAYQEFLRANGINPED
LSQKEYSDIINTQEMYNDDLIHFSNSENCKELQLEKHKGEILGVVIVESGWGSILPTVIL
ANMMNGGPAARSGKLSIGDQIMSINNTSLVGLPLATCQGIIKGLKNQVQVKLNIVSCPPV
TTVLIKRPDLKYQLGFSVQNGIICSLMRGGIAERGGVRVGHRIIEINGQSVVATAHEKIV
QALSNSVGEIHMKTMPAAMFRLLTGQETPMYI
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atggcctataagcagccagcgccagcgatggctcataggaagaggccagggaccagcggc
tccagctgcagcatggtggagccccccgtccggaccccctgccccgccgcctacccccta
gagcagcacgaccaggagcaggaggaggggccgggggaggaggaggaggtccactactgc
cgccagcagggcctggagccagagctgacagacagccggccggacacacctactacaccg
gagccgcaacacgagcatgaacacagccatgaccacgatcacccagactgccacggccat
gatgaccacagtcacagcgacgaccatgcagagtgccatggccacgaccacgagcatgca
gactgtcacgatcacggtcacagtcatgacgatgtagactgccacgaccacggccacgtc
aatgaccacgaccttgcaggctgccacggccaccgtcacgaccacgctgacagcctggat
ggagactccagctctgactatgtgaacaacacctcagaggaggaggactatgatgaaggt
ctgccggaggaggacgagggcatcacctactacatccgctactgccctgaggatgacagc
tacctggagggcagcatagactgcaacgagggcgaggctgactataccgccagcaccgtg
cagcacgtccgggctgagcccccgggcgacacagacgagtgtcaggaagcggtggaggaa
tgggtggagggagaaggtggggtgggggaggtgcgctgtgaggtggtggagcaggaccca
gatgaacagatctacgacgtcctggaccaccacccccaccccgccgctgtcctgcatgag
tcccccccacctacagaggaggaagaggaggaggttagagctggggttgcttacactggg
gactactatggcccagaggaggaaaatgggaactccgtggttcacgaatcgcggtctcca
taccgtggccgtaaagtggtagtggagggggagacgggggaggaggcggaggaggacatt
gaccagatagtggcagagatcaagatgagtatgagcatgggtagtctgagcagcggtggt
actgaccagagtcctgacgagctggtgcaagacagtgtacccagtgattaccaccctcct
gaggcccacgccaagcctgagcctgccccctacaccccaaccccacaccgccacgacagc
agacccaagtccctcaacctcccctcctccacacggcacaacaaccctgagctccagagg
ggcttcaaggttcgctcccgcaccccggaggagcgacagcagtgggctcaagaacagatg
accaacggtgcagagcatcccaggaaacagcagcgttctgacctcaacgtgccgctggag
aacaacaatgtcccggaggaaactaagaaggctgcatctttccccagctttgttgatgtt
ccggggccctgtgagccagaagatcttattgatggcatcatctttgctgctaactacctg
ggttccacccagctgctctctgagaggaacccgtccaagaacatccgcatgatgcaggcc
caggaggctgtcagccgggtcaagagggttcagaaggctgccaaaatcaagaaaaaggcg
agtccagagggagacgcacagacactgaccgaggtggacctcttcatctccaccctgagg
atcaaagtgctcaacgcagacacacaggaaactatgatggacaacgccctgcgcaccatc
tcctacatagctgacattgggaacatcgtggtgctgatggcgaggcgccgcatgccgcgc
acagcctcccaggactgcatcgagaccacacctggagccccagaggtcaagaaacagtac
cggatgatctgccacgtctttgagtctgaggacgcccagctcatagcccagtcgattggg
cagtcatttagcgtggcttaccaggagttcctgagggccaacggcatcaacccagaggac
ctgagtcagaaggagtacagtgacatcatcaacacgcaggagatgtacaacgatgacctc
atccacttctcaaactctgagaactgcaaagagctgcagctggagaagcataagggagag
atcctgggcgtggtcatagtggagtctggctggggctccatcctgcccacggtcatcctg
gccaacatgatgaacggtgggccagccgcccgctccgggaagctcagcatcggagaccag
atcatgtccatcaacaacaccagcctggtgggcctgcctctcgccacctgtcagggaatc
atcaagggcctgaagaaccaggtgcaggtgaagctgaacattgtgagctgtccccctgtc
accaccgtgctcatcaagagaccagacctcaagtaccagctgggcttcagcgtccagaat
gggattatctgcagcctgatgcgggggggtattgctgagcgggggggtgtccgggttggc
caccgcattattgagatcaatggccaaagcgtggtggctacagcgcatgagaagattgtc
caagccctctcaaactctgtgggcgagattcacatgaagacaatgccagcggccatgttc
agactcttaacaggacaggagactcctatgtatatataa
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