Oncorhynchus tshawytscha (Chinook salmon): 112249136
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Entry
112249136 CDS
T05605
Symbol
tjp1a
Name
(RefSeq) tight junction protein ZO-1 isoform X1
KO
K05701
tight junction protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04520
Adherens junction
otw04530
Tight junction
otw04540
Gap junction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
112249136 (tjp1a)
04530 Tight junction
112249136 (tjp1a)
04540 Gap junction
112249136 (tjp1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112249136 (tjp1a)
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
112249136 (tjp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
ZU5
PDZ_6
Guanylate_kin
PDZ_2
SH3_2
SH3_1
Motif
Other DBs
NCBI-GeneID:
112249136
NCBI-ProteinID:
XP_042176891
LinkDB
All DBs
Position
LG04:60049383..60198944
Genome browser
AA seq
1891 aa
AA seq
DB search
MKYQKYITVIQMAMGVTAINRDNCIPPKRQMWVTPTDGLSGIGATGIGTAASSAAITEAQ
DSAEAAAEDAAAARAAARAGAVCGSGAIGGCSVMFATSTLSLPMTQGKPSLRRIKGRIHR
SKSLDSIDLLDSNSAAMEETVIWEQHTVTLHRAPGFGFGIAISGGRDNPHFQSGETSIVI
SDVLKGGPAEGLLSENDRVVMVNAVSMDNVEHAYAVQQLRKSGKNAKITIRRKRKVQIPV
SRPGDRETMSEHEEEDTDEDDGCEPHSGPTSAYGAASGGTASRRTNDRERERSNSSRREH
SASRERSISPRSGRSQGSSTPSRPAKVTLVKSRKNEVEYGLRLASHIFVKDISPESLAAR
DGNIQEGDVVLKINGTVTENLSLIDAKKLIERSKGKLKMVVQRDDRATLLNIPDMDDSIP
SGNNSDRDDISEIHSLTSDHSTRSHDRARGSRSRSPTRSEPSDPSRHSPRQISNGSHRSR
DEERISKPGVMSTPVKGSQEALIQAISDQPLAREDKLPPLPEPKPVYAQPGQPDVDLPVS
PSDAPVPSAGHDDSILRPSMKLVKFKKGESVGLRLAGGNDVGIFVAGVLEDSPAAKEGLE
EGDQILRVNNVDFANIIREEAVLFLLDLPRGEEVTILAQKKKDVYRRIVESDVGDSFYIR
THFEYEKESPYGLSFNKGEVFRVVDTLYNGKLGSWLAIRIGKNHQEVERGIIPNKNRAEQ
LSSVQYTLPKTPGGDRADFWRFRGLRTSKRNLRKSREDLSAQPVQTKFPAYERVVLREAG
FLRPVVIFGSIADVAREKLAREEPDLFELAKTQQHEGVEKSEPKDAGKDQRSSGIIRLHT
IKQIIDRDRHAVLDITPNAVDRLNYAQWYPIVVFLNPDSKQGVKTMRTRLCPESRKSARK
LYERALKLRKNNHHLFTTTINMNNMNDGWYGALKETIQQQQNQLVWVSEGKADGAPDDDL
DLHDDRLSYLSAPGSEYSMYSTDSRHTSDYEDTDTEGGAYTDQELDETLNDEVGLPTEPA
ITRSSEPVREDPPVIQEPLGYGGYQHTVQPDPLNRIDPAGFKAPAAQQNEKAEAVPATMP
ILPQQPEQPVLLAETEAVPPAVDNTVNGVAGLSHGLSLGPIAAPQSEPSPGPGPEADWLR
MPTPDLAQPLAPAPTLEPEPLQSGPPSSEPQMYKKDPYLEEPIRVNHGGVKPSPAIGPPM
TYESQPPYQDQHLYRDYDHPPNRYDGGGYLEPKYRNFDSQLHHEKSVPHYDDQWPPYNQQ
TSGPPPHQQQQPPGHGYDPRLSYEDGPKQDYSPPQPRYDEAPLGYNGRPRYGKPAGPGPI
RYDESPPSGPGGYAPLRYDQEPHPYPPATRSPEPPKQYYQGEPAQRPGPGPAYNQAPPQH
RGYKLPPQQYEPIMNFDAPVPAPKPQPEALRPSPGDTVITTAPNLLPPPPRVEPEDDPAI
RAQSVLSRVKMFENKRSVSVDRAKEAGDTFGLRSADLPTKPGACIPKANSLSNLDQEKSF
RVPEPQKPREVSDDDIVRSNHYDPDEDEEYYRKQLSYFDRRSLDAGKAPPQTTPVIATKP
AAQPQAHPGYNYPRAESVEKVSPVERRYEPVPQVTPAAPPAILPKPTSSEADTVTTNYLP
QKSYPEKSPVNGMAMKEQPKAPANTSYNRYVPKPYTNSAKPFERKFDSPKFNHNLLPNNK
TDLTPAIKAPANSTAPAKPQISPQPTDLDSGMDTFTRTMDNRSKYQHNNINAVPKAIPVS
PSALEDDDEDEGHTVVATARGVFNCNGGVLSSIETGVSIIIPQGAIPEGVEQEIYFKVCR
DNSILPPLDKEKGETLLSPLVMCGPHGLKFLKPVELRLPHCASMTPDGWSFALKSSDSSS
GDPKSWQNQSLPGDPNYLVGANCVSVLIDHF
NT seq
5676 nt
NT seq
+upstream
nt +downstream
nt
atgaagtaccagaaatacataacggtgatacagatggctatgggggtgactgccatcaac
agagacaattgcatccctcctaagagacagatgtgggtgactcccacagatggattgtca
gggataggtgccacagggataggcaccgctgcttcgtctgctgccattacggaagctcag
gattcagcagaagcagctgcagaagatgctgcagctgctcgtgccgctgctcgtgcaggt
gctgtgtgtggttctggtgctataggaggatgcagtgtaatgtttgccacctccacactc
tcgctgcccatgacccagggcaagccctccctccgcaggatcaagggccgtattcaccgc
agcaagagcctggacagcatagacctgctcgactccaatagcgcagcgatggaggaaact
gtaatatgggaacagcacacagtgacccttcacagagccccagggtttgggttcggcata
gccatctcagggggccgggacaaccctcacttccagagtggtgagacttccattgtcatc
tccgacgtcctgaagggaggcccagcagaaggactcttatcggaaaatgaccgtgtggta
atggtcaatgcggtgtccatggacaacgtagagcatgcgtacgcagtgcagcagcttcgg
aagagtggaaagaatgcaaaaataacgatcagaagaaaacggaaggttcagatcccggtg
tcccgcccgggagacagggagactatgtccgagcacgaggaagaggacacggatgaagac
gatggttgcgagccgcacagcgggcccaccagcgcctacggagcagcaagcggcggcacg
gccagcaggcggacgaacgaccgcgagcgtgaacgcagcaacagcagccggcgggaacac
agtgcctcgcgagagaggagcatctcgccccgctccggccgatcccaaggctcctctaca
ccgtcccgccccgccaaagtcacccttgtcaagtcccgcaagaatgaagtagagtatggt
ctgcgtttggccagccacatctttgtgaaggacatctccccagagagcctagcagcacgg
gacggaaacatccaggagggagacgtggtgctgaagattaacggcacagtgaccgagaac
ctgtcgctaatagatgctaagaagctgatcgagaggtcaaagggcaagttaaagatggtg
gtgcagagagacgacagagccacgttgctcaacatccccgacatggacgacagcattccc
tccggcaacaactccgaccgagacgacatttcagaaattcattcactgacctcagaccat
tccactcgatcccatgatcgagcacggggcagtcgatcccgctcccctacccggtctgag
ccctcggacccctcccgacactcaccacggcagattagcaatggcagccacagaagtcga
gatgaggagaggatttccaagcccggggtgatgtcgactcctgttaaaggttcccaggag
gccctaatccaggccatcagcgaccagccactggccagagaggacaaactgcccccactg
ccagaaccaaagccagtgtatgcccagcctggccagcctgatgtggaccttccagtcagc
ccctctgatgccccagtgcccagcgctggtcatgatgacagcatcctcaggccgagtatg
aagctggtgaagtttaagaagggggagagtgttggcctgaggctggccggagggaacgat
gtgggcatctttgtagccggagtcctggaggacagcccagctgccaaggaaggtctggag
gaaggagaccagattctcagggtaaacaacgtagactttgctaacatcatccgagaggag
gctgtgctgttcctcctagaccttcccaggggtgaagaggtcaccattctagcccagaag
aagaaggatgtttaccgtcggatagtagagtcagatgtgggtgactcgttctacatccgg
acccactttgagtatgagaaggagtctccgtacggcctgagcttcaacaagggagaggtg
ttccgtgtagtggacaccctctacaacggcaagctgggctcctggctcgccatacgcatt
ggcaagaaccaccaggaggtggagagaggcatcatccccaacaagaacagggcagagcag
ttgtccagtgtgcagtacaccctccccaaaacgccagggggcgacagggctgacttctgg
aggttccgtggtctgcggacctccaagaggaacctgaggaagagcagagaggacctgtct
gcccagccggtccaaaccaagttccctgcctatgagagggtggtgctgagagaggctggg
ttcctgaggcctgtggtgatctttgggtccatcgcagacgtggcgagagagaagctggcc
agagaggagcctgacctgtttgagcttgccaaaacacagcaacatgaaggagtggaaaag
agtgagcccaaagacgcaggaaaagaccagcgcagctccgggatcattcgcctccacacc
attaaacagatcattgaccgggaccggcatgctgtgctggacatcacccccaacgctgtg
gaccgtctgaactacgcccagtggtaccccatcgtggtgttcctcaacccagacagcaag
cagggcgtcaagaccatgagaaccaggctgtgccccgagtccaggaagtcagccaggaaa
ctctacgagagagccctcaaactgaggaagaacaaccaccacctcttcaccaccaccatt
aacatgaataatatgaatgacgggtggtacggtgccctgaaggagaccattcaacagcag
cagaaccagctggtgtgggtttcagagggaaaggcggatggtgctccagatgatgacctg
gatctgcatgatgaccgtctgtcgtacctgtcggctccgggcagtgagtactccatgtac
agcacggacagccgccacacctccgactacgaggacacggacacagagggcggggcctac
accgaccaggaactagacgagacgctgaacgacgaggtgggcctgcccactgagcccgcc
atcacccgctcctcggagcccgtccgagaggacccgccagtaatccaggagcccctgggg
tacggcgggtaccagcacacagtgcagcccgaccccctgaaccggatcgacccagccgga
ttcaaggcaccagcggcccagcagaatgagaaagcagaggctgttccggccaccatgcct
atcctccctcagcagcctgagcagcctgtgttactggctgagacagaggcagtgccccct
gctgtcgacaacaccgtaaatggtgtagctggtttgagccatggtttaagccttggccct
atcgctgctccccagagcgaacccagcccaggccccggccccgaggctgactggcttagg
atgcccacccctgatctagctcagcccctggccccggccccaacgctcgaacccgaaccc
ctacaatccggaccgcccagttcagaaccacagatgtacaagaaggatccctacctggag
gagccaatcagagtgaaccatggtggtgtaaagccgtctccggcgattgggcctcccatg
acctacgagtcccagcctccgtaccaggaccaacacctgtacagagattacgatcacccg
cctaaccgctacgacgggggtggctacctcgaaccaaagtatcgtaacttcgactctcaa
ctgcaccacgagaaaagcgtgcctcactacgatgaccagtggcctccttacaaccagcag
acctctggcccaccaccccaccagcaacaacaacctcctgggcatggctacgacccacgg
ctgtcctacgaagacggacccaagcaagactacagccctcctcagccgcgctatgatgag
gccccgctgggctacaatggacgacctcgctacggaaagcctgcaggaccaggacccatc
cgctacgatgagtctcctccatccggcccagggggctacgctcctctacgttacgaccag
gagcctcacccgtatccccctgcaacacgctctccagagccccctaaacagtactaccag
ggggagcctgcccagcggccaggacctgggccggcctacaaccaggcaccacctcagcac
cgaggctacaagctcccgccccaacagtacgaacccatcatgaactttgacgcccccgtg
cccgcccccaaaccacaaccagaggctctccgtccctcacctggggacacggtgatcact
acagcccccaatctccttccccctccccccagagtggagccggaggacgacccggccata
agggcccagtcggtgctgtccagggtcaagatgtttgagaacaagcgctctgtgtctgtg
gaccgagccaaggaggcaggggacaccttcgggctcaggtcagcagatctgcccaccaaa
ccaggtgcgtgcattcctaaagccaactcgctcagcaatctggaccaggagaagtcgttc
agagtccctgagcctcagaagccccgggaggtgtccgatgatgacatagtgcgctctaac
cactatgacccagatgaagacgaggagtactacaggaaacagctgtcctactttgaccgg
cgcagcttggacgcaggcaaggcacctcctcagacaacacctgtcatcgcaaccaaacct
gctgctcaaccacaagcacatcccggatacaactacccaagggcagagtcagtggagaag
gtcagtcctgtggagaggagatatgaacccgttccccaggttacccccgctgccccacct
gccatactacccaaacccacctcatctgaggcagacacagtcacgaccaactacctgccc
cagaagagttaccctgagaagtctccagtgaacggtatggcaatgaaggaacaacccaag
gccccagccaatactagctacaaccgctacgtccccaagccctacaccaactccgccaag
cccttcgagaggaagtttgacagccccaagttcaaccacaacctgctgcccaacaacaaa
acagacctgaccccagccatcaaggccccagccaacagcacagccccagccaagccccag
atctccccccagcctacagacctggactctggcatggacaccttcacacgcaccatggac
aacaggtccaagtaccagcacaacaacatcaacgctgtgcccaaggccatccctgtcagc
cccagtgctctggaggatgatgatgaggatgaaggtcacacggtggtggccacggcccgg
ggggtcttcaactgtaatggaggggtgctgagctccatcgagacgggtgtcagcatcatc
atcccacagggggccatccccgagggcgtagaacaggagatctacttcaaagtctgccgg
gacaacagcatcctgccccccctggacaaggagaaaggagagaccctgctcagcccgctg
gtgatgtgtggccctcacggcctcaagttcctgaagcctgtggagctgcgtttacctcac
tgtgcgtctatgaccccagatggttggtcttttgctctaaaatcctccgactcctcgtcg
ggtgatcccaagagttggcagaatcagtctctccctggagaccccaactacctggtggga
gccaactgtgtgtctgtgctcatcgaccacttctga
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integrated database retrieval system
