Oncorhynchus tshawytscha (Chinook salmon): 112249174
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Entry
112249174 CDS
T05605
Name
(RefSeq) AP-1 complex subunit gamma-1 isoform X1
KO
K12391
AP-1 complex subunit gamma-1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
112249174
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112249174
Membrane trafficking [BR:
otw04131
]
Endosome - Golgi transport
Others
AP-1 complex
112249174
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Alpha_adaptinC2
Cnd1
Kinetochor_Ybp2
Katanin_con80
Motif
Other DBs
NCBI-GeneID:
112249174
NCBI-ProteinID:
XP_024274653
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Position
LG04:complement(64155604..64184694)
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AA seq
820 aa
AA seq
DB search
MPAPIRLRELIRTIRTARTQAEEREMIQKECAAIRSSFREEDNTYRCRNVAKLLYMHMLG
YPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQYVQG
LALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEMFLPATK
NLLSEKNHGVLHTSVVLLTEMCERSPDMLLHFRKNEKLVPQLVRILKNLIMSGYSPEHDV
SGISDPFLQVRILRLLRILGRSDDDSSEAMNDILAQVATNTETSKNVGNAILYETVLTIM
DIKSESGLRVLAINILGRFLLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDL
DVSIKRRAMELSFALVNGNNIRGMMKELLYFLDSCDPEFKADCASGVFLAAEKYAPSKRW
HIDTIMRVLTTAGSYVRDDSVPNLIQLITNSVEMHAYTVQRLYKALLDDISQQPLVQVSS
WCIGEYGDLLVSGQCEEEEPIQVTEDEVLDVLEGLLVSNLSTPVTRGYSLTAIMKLSTRF
SSVNRIKKVVSIYSSSIDVELQQRAVEYNALFKKYDHMRPALLERMPIMEKTASNGPTEI
MQTNGETEPSVPDTKHLPLVTQPANQANDLLDLLGGNDVVPVIQTTLPTKPASAGGELLD
LLGDLSLSGGLAPAPSVPVSQPPFLLDGLSSQPLFNDTSAAIPPMTAYSKNGLKIEFTFE
RANPNPNIAVITIHATNTTEADMTEFVFQAAVPKTFQLQLLSPSSNIVPALNQGSVTQVI
RVLNPQKQQLRMRVKLTYTHKGSPVQDLAEVNNFPPQSWQ
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgccagcgccgatcagactgcgggagctgatccggaccatccggacggctcggacccag
gcagaggagcgtgagatgatccagaaagagtgtgctgctatacgctcgtccttcagagag
gaagacaacacttaccgctgtagaaatgtggctaagctactctacatgcacatgctgggc
tacccagcgcactttgggcagctggagtgcctgaagttgattgcgtcccagaagttcact
gacaaacggatagggtacttgggagccatgctactgttggacgagaggcaggacgtccat
ctactaatgacaaactgcatcaagaatgatctgaatcacagcacacagtatgtccagggc
ctggccttgtgcaccctgggctgcatgggctcctcagagatgtgtcgagacctggctgga
gaggtggagaagctgctcaaaacctccaactcctacctgaggaaaaaggcggcgttgtgt
gcagtccacgtcatcaggaaggtcccagagttgatggagatgttcctcccagccacaaaa
aacctgctgagcgagaagaaccacggtgttctccacacttctgttgtcctcctcactgaa
atgtgtgaaagaagtcctgacatgctcttacacttcagaaagaatgagaagttggttcca
cagctggtgagaatcctgaagaacctgatcatgtctggttactctcctgagcatgacgtg
tctggcatcagtgaccccttcctgcaggtgcggatattgagactattgcgaattctgggc
aggagtgatgacgactcaagtgaagcaatgaatgacattcttgcacaggtggcaaccaac
accgagacaagtaaaaatgtaggcaatgcaatcctctacgagacagtactgaccataatg
gacatcaagtcagaaagtggattgagggtgttggctatcaacatactgggacgcttcctt
ctcaacaacgacaaaaatattagatatgtggcactgacatccctactgaagactgtacag
acggaccacaatgcagtgcagaggcatcggagcaccattgtggactgtctaaaagacctg
gatgtgtccatcaagaggcgtgcgatggagctgagcttcgccctggtgaatgggaacaac
atccgaggcatgatgaaggagctgctctacttcttggactcctgtgacccagaattcaaa
gcggactgtgcgtccggcgtcttcctggctgcagagaaatatgcgccttcaaaaagatgg
cacattgacaccatcatgagagtcctgacaacggcggggagctatgtccgagacgactct
gtccccaacctcatccagctcatcaccaacagtgtggagatgcatgcctacacggtgcag
agactctacaaagccctgctggatgacatctcacagcaaccactggtccaggtgtcatcc
tggtgtataggggagtatggagacctgctggtatctggacagtgtgaggaggaggagccc
atccaggtgacagaggatgaagtcctggatgttttggaaggtcttcttgtgtccaacttg
tccacccctgtaacccgtggttactccctcactgccatcatgaagctgtctactcgcttc
agcagtgtcaaccgaatcaagaaggtggtgtcaatatacagcagcagcatcgacgtggaa
ctgcaacagagagctgtggagtacaatgcacttttcaagaaatatgatcacatgaggcct
gccttactggagcgaatgcccatcatggagaaaacggcctccaatggccctacagagatc
atgcagaccaatggggagacagagccctcggtgcctgacacaaaacacctgcccctagtc
acccagccagccaaccaggctaatgacttgttagacctgctgggaggtaatgatgtggtg
cctgtgatccaaaccaccctgcccaccaagcctgcctcggctggaggagagctgctcgac
ctactgggggacctctcactgtctggtggtctagctcctgctccctctgtgcccgtctcc
cagccccccttcctcctggatggtctctcctcacagcccctgtttaatgatacttcagca
gctattccccccatgacagcgtatagcaagaatggcctgaaaatagagttcacctttgag
agggccaacccgaatccgaacatagcagtcatcactatccacgccaccaacaccactgag
gctgacatgacagaatttgttttccaggctgcagtaccaaagacattccagctgcagctc
ttgtcccctagcagtaatattgtcccagcactcaaccagggaagtgtcacacaggtcatc
agagttctcaacccacagaagcaacaactccgcatgagggtcaagctgacgtacacccac
aaaggctcacctgtccaagacctggccgaggtcaacaactttcctcctcagtcctggcaa
tga
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