Oncorhynchus tshawytscha (Chinook salmon): 112249194
Help
Entry
112249194 CDS
T05605
Name
(RefSeq) E3 ubiquitin-protein ligase NEDD4-like isoform X1
KO
K10591
E3 ubiquitin-protein ligase NEDD4 [EC:
2.3.2.26
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04120
Ubiquitin mediated proteolysis
otw04144
Endocytosis
otw04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
112249194
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112249194
09144 Cellular community - eukaryotes
04530 Tight junction
112249194
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112249194
04121 Ubiquitin system [BR:
otw04121
]
112249194
03029 Mitochondrial biogenesis [BR:
otw03029
]
112249194
Enzymes [BR:
otw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
112249194
Membrane trafficking [BR:
otw04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
112249194
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
HECT type E3
112249194
Mitochondrial biogenesis [BR:
otw03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
112249194
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
Motif
Other DBs
NCBI-GeneID:
112249194
NCBI-ProteinID:
XP_024274704
LinkDB
All DBs
Position
Unknown
AA seq
1283 aa
AA seq
DB search
MARRLRLHFASRRSNTDPLSESLSSHGEESGLCVSTRSPAESLAHSSVHMKVIPGQLALA
LPPLSPEYGNLQRYSSVFIPKVNTGSGSKKSTLQISLQPHGKLNGELENSTEGGEPGVCE
VGAGSGSDGGSCRNSTASDAGYCSSSSIFEPELPDQRRAAQERSLPRRKARVPLRRCSSL
VIFPRSPCNTPPASPVSPVALPALPPVRGSYQTSHQLQLSPSEPLQEDEMGTSKASIATA
MNGLRLSKSSFPSVEFRDARPMVHFNVPLLDKPKDKIEECEKTDRSGNLDRHSSVLLHFA
HQRLMSGKASTNKTTVNVECPESLTQATQLEGECGPRHIKLYRSTSACLLPSAKLLERSH
SARRADNGNGQEMLEENHCHHALQRSFSLEVPYHNTGISCHVSNQKLANSPHVHIHVSHG
SGARVSSPVIDVNTIHKRDHIQKSPARKTTTRDDFLGQVDVPLHQIPTENPNIERPYTFK
DFLLHPRSHKSRVKGHLRLKMTYLPKNNSEDAAEQTEDMDPSWEFLEGQDMSGPRHNHLL
PAMPPGWEERQDNLGRTYYVNHETRTTQWHRPIVQDSQVEAEQRQNIHMEAQHAFTARRQ
ISDQEDSNDRQQESTESWEIITEDESTLYNNQRSPPPPHSPLEFHSFCDELSRLQALGAT
SGNRRTSLQLQGPSSHSSHSSRRGSAQTLTVEEHPVHPVVSHSSHSSRRGSAQTLTVEEH
PVHPVLFATSAGLPPGWEEKQDSKSRPYYVNHNSRITTWTRPLIQITSDAAAQAVLSQNA
TVYQPPMLSPEGSPQHSPGSQRECGFMPAGWEVRNAPNGKPFFIDHNTKTTSWEDPRLKI
PVHMRRRPSLDPTDLGPMPPGWEERVHSDGRIFYIDHNTKNTQWDDPRLQNSAITGPAVP
YSRDYKQKYEYFRKKLKKPADIPNRFEMKLRRNTVLEDSYRRILSIKRADFLKARLWVEF
EGEKGLDYGGVAREWFFLISKEMFNPYYGLFEYSATDNYTLQINPNSGLCNEDHLSYFKF
IGRVAGMAVYHGKLLDAFFIRPFYKMMLQKPITLQDMESVDSEYFNSLKWILENDPIDLD
LRFTIDEELFGQTHQHELKPGGSEIVVTDDNKKEYIHLVMQWRFVNRILKQMTAFKEGFY
ELIPQDLIKIFDENELELLMCGLGDVDVNDWRENTKYKNGYCPNQPVILWFWKTVLLMDA
EKRIRLLQFVTGTSRVPMNGFAELYGSNGPQLFTIEQWGTRDKLPRAHTCFNRLDLPPYE
SFEELREKLHIAIENAQGFDGVD
NT seq
3852 nt
NT seq
+upstream
nt +downstream
nt
atggcacgccggctccgcttgcactttgcgtcgaggagaagcaacacggatcctctgtca
gagagcctgagcagccatggtgaggagagcggtctctgtgtgtcaactcgcagccccgca
gagagcctagcacacagctctgtccacatgaaggtgattccagggcagctagccttggct
ttgcctcccctgtcaccagagtacggtaatttacagcgctactcatccgtatttataccc
aaggtgaacaccggcagcggcagcaagaagagtactctgcagatctccctgcagccccat
ggcaagctgaatggagagctggagaacagcactgagggcggggagccaggggtctgcgag
gtgggagcgggcagtggctcagatgggggctcctgtagaaacagcacggccagtgacgca
ggctactgcagcagcagcagcatctttgagccagagctcccagatcagcgtagggcagcc
caggagaggagtctgccccgtaggaaagccagggtccccctgagacgctgctcctccctg
gttatatttccacggagcccctgtaatacaccaccagcctccccggtcagccctgtggct
cttcccgccctgcctccagtcaggggctcctaccagacttctcaccagctccagttgtcc
cccagtgagcccctgcaggaggacgagatgggtacctcgaaagcgtccatcgccacggcg
atgaacggcctacgactctctaagagcagctttccgtcagtggagttccgagacgccagg
cccatggtgcattttaacgttccacttctggataaacctaaagacaaaatagaggagtgt
gagaagactgaccgctcgggaaatttagaccgacactccagtgtgctactgcactttgcc
caccagcgactaatgtctgggaaggcatctacaaacaaaacaacagtcaatgttgaatgt
cctgaatctctaacccaggccactcagttggagggtgaatgtggccctcgccacattaag
ctgtatcgcagcacctcggcttgcctgctcccctcagctaaacttttagagaggagccac
agtgcccgtcgcgcagacaatggaaatggacaggaaatgcttgaggaaaaccattgtcat
cacgccttacaaaggagcttttctctggaagtcccctaccataatactggtatttcatgt
cacgtttccaaccaaaaactagctaactctccacatgtgcacatccatgtgtcccacggc
tctggggcaagggtctctagccctgtcattgatgtaaacactatccacaaaagggatcac
atacaaaagagccctgcaagaaagaccacgacacgtgatgactttctggggcaggtggat
gtaccattacaccagataccgacagaaaatcctaacattgaaaggccatacacattcaag
gattttctacttcacccgagaagtcacaaatccagggtcaaaggtcatctccgtctgaag
atgacctacctacccaaaaacaactcagaggatgctgcagaacagactgaagacatggat
cctagttgggagtttttagagggccaggacatgtccggtcccaggcacaaccacctgctg
cctgcaatgccccctggctgggaggagaggcaggacaacctgggcaggacctactatgtc
aaccacgaaaccaggaccacacagtggcacaggcccatagtacaagacagccaggtagag
gcagagcagaggcagaacatccacatggaggcgcagcacgccttcaccgcccgcagacag
atctccgaccaagaggactccaacgacagacaacaagagtcaactgagagttgggaaatc
ataacagaggatgagtccaccttgtacaacaaccagcgctccccccctccacctcactcc
cccctggagtttcactccttctgtgacgagctcagtcgcctccaggccttgggtgccaca
tccggcaaccgacgtacctccctccagctgcagggcccttccagtcattcaagtcactcc
agtcgcagaggcagtgcccagactctgacagtagaggagcaccctgttcatcctgtggtc
agtcattcaagtcactccagtcgcagaggcagtgcccagactctgacagtagaggagcac
cctgttcatcctgtgttgttcgcaacctcagcggggctgcctccaggctgggaggagaag
caggatagtaagagcagaccctactacgtcaatcacaacagcaggataaccacttggaca
cggccactcatccagataacctcagacgcagcagcccaggctgttctgtcccagaacgcc
actgtgtaccagccccccatgctctctcctgagggctccccccagcactcccccggctca
cagagggagtgtggcttcatgcctgcaggctgggaggtccgcaatgcccccaacggaaaa
cccttcttcatcgaccacaacactaagaccacttcctgggaagaccccaggttgaagatt
cctgtgcacatgaggaggagaccttcgctagacccaactgacctcgggccaatgccgcct
ggctgggaggagagggtccacagtgatgggaggatattctacatagatcacaacacgaag
aacacacaatgggatgaccccagactgcagaattcagccataactggaccagctgtgcct
tactccagagactataaacagaagtatgaatacttccggaagaagctgaagaaaccggct
gacatccccaaccgctttgagatgaagctcaggcggaacaccgtgctagaggactcctac
agacgaatcctgtcaatcaagagggccgatttcctgaaggcgcggctgtgggtggagttt
gagggagagaagggcttggattacgggggcgtggccagggagtggttcttcctaatctcc
aaggagatgttcaacccctattatgggctgtttgagtattctgccacggacaactacact
ctgcagatcaaccccaactcaggcctctgcaatgaggaccacctgtcctacttcaagttc
attggccgtgtggcaggcatggctgtctaccatggaaagctgctggacgccttcttcatc
aggcctttctacaagatgatgttgcagaagcccattactctacaggacatggagtctgtg
gacagtgagtacttcaactccctgaagtggatattggagaatgacccgatagacctggat
ctgaggttcaccatagacgaagagctctttggacagacacaccagcatgagctgaagcca
ggaggatctgaaatagtagtcactgatgacaacaagaaggaatacatccatcttgtcatg
cagtggaggttcgtgaacaggatactgaagcagatgaccgcattcaaggagggattctat
gagttgataccccaggatctcatcaagatctttgacgagaatgagctggagctcctgatg
tgtggcctgggagacgtggatgtgaacgactggagggagaacaccaagtacaagaatggc
tactgtcccaaccagcctgtcatcctgtggttctggaagactgttctgctgatggatgca
gagaagcgtatccgcctgttgcagtttgtgactggcacctcccgggtcccaatgaatggc
tttgcagagctctatgggtctaacggaccacagctgtttaccattgagcagtggggaaca
cgagacaaactacctagagcccacacatgcttcaaccggctggatctgcctccctatgag
tcgtttgaggagctgagggagaagctacacatcgccatagagaatgcacaaggctttgat
ggagtggattag
DBGET
integrated database retrieval system
