Oncorhynchus tshawytscha (Chinook salmon): 112249271
Help
Entry
112249271 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: mucin-5AC-like
KO
K22023
mucin-6/19
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112249271
Membrane trafficking [BR:
otw04131
]
Others
Mucins
Secretory mucins
112249271
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWD
C8
TIL
VWC
Pacifastin_I
Motif
Other DBs
NCBI-GeneID:
112249271
NCBI-ProteinID:
XP_042177044
LinkDB
All DBs
Position
LG04:complement(68099307..68111367)
Genome browser
AA seq
1503 aa
AA seq
DB search
MGTTKDAPIWRLICLVLLIKSTQTVSPTTSVTIIPTMITTIPTLSGVNASHNDQVCSTWG
NYHFKTFDGDFFQLPSTCNHVVTSLCKSSYEAFNIQMRRQVVDNQPTISKITMKLDGVVV
ELSKGGVVVNAQTVTLPFSLSGVSIVKTTSNVKVVAKLGLVAVWNKDDSLMIEMNEKYRN
QTCGLCGDFNEVQTYNEFIINGGELSSSDYGNLWKLDGPLEVCEEPTLTSVESCGDEEFC
QQLFSSAAFSSCTNYLDMDAFIKTCLADLCHCDNSTNSFCLCNTISEYSRQCVHAGGKPQ
QWRTEHFCYKTCPFNMEHQECGNPCVDTCSNPEASQLCEDHCTDGCFCPLGTVFDDVSNS
GCIPLSECLCVHNGQVYKSGESYTSNCKECTCAGGQWACTDKDCPGTCSVEGGSHINTYD
GKAYTFHGDCSYILTKQCNGTEFTVLGDIVKCGLTDTQTCMRAVTLALSSRSTVIQVQSS
GSVLVNQILSQLPLYTAEVTIFKPSSFYIVIQTTLGVQLQIQLSPVMQIYITAISSYKGT
TCGLCGNYNDVQADEFRVISGLVEGTAVAFANTWKTMASCPDVKTSFENPCSLSIENEKY
AQHWCSMLSDPKGVFSPCHSEIRPDTYKTNCMYDSCNCEKSEDCMCAAVSSYVHACAAEG
IQLTGWRDTICNKFAACPRQTVYTYNMTSCGRTCRSLSMTDQSCQVKFVPVDGCGCAEGT
YMDEAGQCVAPTNCPCYDKGSVVPAGETISRDGATCTCRQGTLSCTGGARPFSNFEMNQE
DSSNSLCTVPMVFFNCSTAPPGASGSECQKSCKTLDMTCISTECTSGCMCPTGLVSDGNG
DCIKEELCPCAHNGATYQAGETLKVDCNTCTCKDRQWQCTTHLCDGVCAIYGEGHYITFD
EKRFNFNGNCEYTLIQDYCGNTNGTGSFRVLTENVPCGTKGTTCSKTIKLFLGTSELILA
DGTAQVVRSTPEEQFPKQISLLGNYLVIEVKSGLILMWDKKTSLFIKLSPQYQGQVCGLC
GNYDGNANNDFTTRAQAIVVDPVEFGNSWKVSSSCPSVSAVVHPCASNPYRASWAQKQCS
IINSDVFTACQNQVDPSPYYDACVRDSCACDSGGDCECFCTAVAAYAKACNEAGACVAWR
TPRICPLFCDYYNPTGECEWHYKACGAQCMKTCRNPSGDCSSLIPALEGCYPNCPVAQPY
FNEETMKCVEREQCGCYDYEGNQYTNGQNLPAQNCETCTCTMTGVSCSYDVNDCTCLYNG
KQHPYGETLYNTTDGIGNCIVAVCASNGTITRNISPCQVTTTPVPTTTSPLTTTTVHATT
TLKPTTVFHFTTPEPTSTWSSTTMEMTPKITTSSSLNPSTTSSGSSTVTIPKPTTVTTTT
MVPTTSGEVATSTTAETSTKEETTTETITSTKPPKVVTTGMATTTSHVTTKPSVTSIAPI
TKTLPHLTGTLWPLTSTTQPSTTTESVFTGGILTTEPHSQITNTTXIWDIHTQHSIIIYN
CKC
NT seq
4512 nt
NT seq
+upstream
nt +downstream
nt
atggggacaaccaaggatgcaccgatatggaggctgatatgcctggtactactgatcaaa
tcaacacaaacagtgagccccaccacaagtgtaacaatcatcccgacaatgatcacaacg
atacccacactttcaggagtgaatgcctcacacaatgaccaggtctgcagcacatggggt
aactaccatttcaagaccttcgacggggactttttccagctcccctccacatgcaaccat
gttgtgacctcactgtgtaagagcagctatgaggctttcaacatccagatgaggcgacag
gtggtggacaaccagcccaccattagcaagatcaccatgaagctggatggtgtagtggtg
gagctttccaagggtggtgttgtggtcaatgcgcagacggtgaccctgccgttcagcttg
tctggagtcagcatcgtgaagactacatccaatgtgaaggtcgtagccaaactggggctg
gttgctgtttggaacaaggatgactccctaatgattgaaatgaacgagaagtacagaaac
cagacctgcggactgtgtggtgacttcaatgaagtccaaacatacaacgagttcatcatc
aatggtggggaactctctagctctgactatggaaacctctggaaactggatggccctctg
gaagtctgtgaggagcctacgctaacttctgtggagagttgtggagatgaggaattttgt
cagcagctgttctccagtgcagctttcagtagctgcactaattatttggatatggacgcc
ttcatcaagacctgccttgcagacctgtgccactgtgataacagcaccaactccttctgc
ctgtgcaacaccatctcagagtactcccgtcagtgtgttcatgcaggggggaagccccag
caatggaggactgaacatttctgctataagacatgccccttcaacatggagcaccaggag
tgtggaaacccctgtgttgacacctgctccaacccagaggccagccagttgtgtgaagac
cactgtacagacggctgcttctgtcctctaggtactgtttttgatgatgtcagcaacagt
ggctgtattccattgagtgaatgcctctgtgtccacaatggacaagtatacaaatctgga
gaatcttacaccagcaactgtaaagaatgcacctgtgctggtggtcagtgggcctgtaca
gacaaggactgtcctgggacctgctctgtggagggaggatcccacatcaacacctatgat
gggaaagcctacaccttccatggggactgctcttacattctgaccaagcaatgcaatgga
actgaattcaccgtgctgggagacattgtgaagtgtgggttgactgacactcagacctgt
atgagggctgttaccctagccctctccagcagatccaccgtgatccaagtccagtcaagt
ggaagtgttcttgtaaatcagattctttctcagctcccgctctatacagctgaagtgacc
atcttcaagccctcctcattctacattgttatccagacaactcttggagttcaacttcag
atccagctttcaccagttatgcagatctacataactgccatctcatcctacaaaggaaca
acctgtggcctttgcggaaactacaatgacgttcaggcagatgagttcagagtcatcagt
ggattggtggagggcacagctgtagcttttgccaacacatggaagaccatggccagctgc
cctgatgtcaagactagctttgaaaacccctgcagtttgagcatcgaaaacgagaaatac
gcccagcactggtgttccatgttatcagatcctaaaggagtgttctccccttgccattct
gaaataagaccagacacctacaaaaccaactgcatgtatgacagctgtaactgtgagaag
agtgaggactgcatgtgtgctgccgtctcctcttatgtccacgcttgtgctgccgagggt
atccagctcactggctggagagacactatctgcaataaattcgccgcctgtcccagacaa
acagtttatacctacaacatgaccagttgtggacgtacctgccgctcactgagcatgaca
gaccaatcttgccaggtgaagtttgttccggtggacggctgtggctgtgcagagggcacc
tacatggacgaggctggccagtgtgttgcccccaccaactgtccctgctatgacaagggc
tcagtggtccctgcaggagagactatcagcagagacggtgccacctgtacttgcagacaa
gggacactgagttgcactgggggagcaagaccattcagtaactttgaaatgaaccaagag
gactcaagcaattcattatgcacagtgccaatggttttcttcaactgctcaactgcacct
ccaggagcttcaggttcagagtgtcagaagagctgcaaaactctggatatgacctgtatc
agcacagagtgcacatcaggttgtatgtgcccaaccggactggtgtctgatgggaacgga
gactgcatcaaggaggaactttgtccttgtgctcacaatggagctacttaccaagctgga
gagactcttaaggttgactgcaatacatgtacttgcaaggacagacaatggcagtgtacc
acacatctctgtgatggagtttgtgcaatctacggagagggtcactatatcacctttgat
gagaaaaggttcaactttaatggaaactgtgaatacactctcattcaggactactgtggc
aatactaatggcactggcagcttcagagtcctcactgagaacgttccttgtggaactaaa
ggcaccacctgctccaagaccatcaagctcttcctggggaccagtgagctcatattggca
gatgggaccgctcaagttgtcagaagtactccagaagagcagtttcctaaacagatcagc
cttctggggaattatctggttattgaagtcaaaagtggtctaatcctcatgtgggacaag
aagaccagtctctttatcaagcttagcccacaataccaggggcaagtgtgtggtctgtgt
ggaaactatgatggcaacgcaaacaatgacttcaccactagagcccaggcgatagttgtt
gatccagtggaatttggaaacagctggaaagtttcatcaagctgcccaagtgtatccgct
gtagtgcacccatgtgcctccaacccgtacagagcgtcttgggcccagaaacagtgcagc
atcattaacagtgatgtcttcacagcctgccagaaccaggtggacccctctccttactac
gatgcttgtgtgagagactcatgtgcttgtgacagtggtggagactgtgagtgcttctgt
actgcagtggcagcttatgcaaaggcctgtaatgaagctggagcctgcgtagcctggaga
acccctcgaatttgcccactgttctgtgactactacaaccccactggagaatgtgagtgg
cactacaaggcatgtggagctcagtgtatgaagacctgcagaaacccttccggagactgt
tctagtttaattccagcattggaaggctgctatcctaactgtcccgtggcacaaccttac
ttcaatgaggagacaatgaagtgtgtggagagggaacaatgtggctgttatgactatgaa
ggaaaccagtacaccaatggacagaatcttccggcacaaaactgtgaaacatgcacctgc
acaatgactggagtgagttgtagttatgatgtaaatgattgtacatgcttgtataatggt
aaacaacacccatatggagaaaccctctacaacacaacagatgggattggtaactgcata
gttgctgtttgtgcctcgaacggaaccattaccaggaacatttccccttgtcaagtgacc
acaactccagtaccaactacaacatcccctctgacaacaacaactgtccatgcaacaacc
acactaaaacccacaactgtcttccacttcacaacacctgaaccaacttcaacttggtct
tctacaacaatggagatgacacctaaaatcaccacaagttcatcattaaatccttcaact
acatcatcaggatcaagtacagtcacaattcccaaaccgacaactgtaactacaacaact
atggtacccacaaccagtggagaagtagctacatcgaccacggccgaaacgtcaacaaag
gaagaaaccacaactgagacgatcacatctacaaagccacctaaagtagtcaccactggt
atggcaacaacgacatcacatgtcaccacaaaaccatcagtaacttcgattgcgccaatt
acaaaaacactacctcaccttacaggtacattgtggcctttaacatcaacaacacagccc
tcaacaacaacagaatcagtcttcacaggtggaatattgacaacagagcctcactcacaa
attaccaatacaactnacatctgggatattcacacacaacacagtatcatcatctacaac
tgtaaatgttga
DBGET
integrated database retrieval system
