Oncorhynchus tshawytscha (Chinook salmon): 112249305
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Entry
112249305 CDS
T05605
Name
(RefSeq) capping protein, Arp2/3 and myosin-I linker protein 3 isoform X2
KO
K20493
leucine-rich repeat-containing protein 16
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112249305
Membrane trafficking [BR:
otw04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
112249305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
Myosin_TH1
Motif
Other DBs
NCBI-GeneID:
112249305
NCBI-ProteinID:
XP_024274897
LinkDB
All DBs
Position
LG01:complement(30624268..30670490)
Genome browser
AA seq
1469 aa
AA seq
DB search
MLRREAIRSVHHCERKRGGDRGRRDMASKDVTASCFVSVSRDITESIRKIVDKSSIKFIR
GIKLDTKNGKSEDRILVLTTWRLYFLTAKVPTKIEVTFNFLEIRAMNSHPEFQVVIDLDK
STYSLRLQSRDHLSHVVSHVNFALSRIFNNSVFSPSICHSDSDLSEGSRKYSPSSETSVE
TQRACGGFSETYAALCDYNGISCKEEVQWDVDTIYHSQDNREFNLVDFSHLESRDLAVIV
ASMAYNTWFTKLYCKDLRIGSEVSEQVLHTLSKSSSLEELTLENAGLKSDFAQKLSVALS
ENPASVIHSLNLAHNTLDNQGVSNLIQQVCRLSKGLRLLNLSKTSLNSKGVVSLSQALCS
SDEYSNSLLHLDLSKNPGVLSGEDASNLYLFLSQPNCLVHLDLSDTDCAVDSLFGALLRG
CCADLSYLNLSKNSFSHRKVKETLPLFRQFFSSAFSLTHVSLASMKLPPDALRSLFIGLT
TNPHINDLHLDISGCELKSAGASVIQELFPRVSSIATLDISDNGLDADLLSVLPALSRHT
SLKHLYLGKNFNIKSSRVLEEILQKLVQLIQEEECALQSLSLADSRLRSRGTVLVNALGS
NTCLRKVDLSGNSLEDIGAKMLSKALQINTTLRSVTWDRNNTSATGFLDVARALEHNFTL
QYMPLPLSDISQAYRSTPERTEQALTKIQRALLRNNQTQRFSQRQALRLHQGLVTSTAEQ
VMERLCVRVQQQVCVLRGVGEMEEIQAAKQVLKEARNSRALYPSLCELAHVLSVDGPVRQ
RLDSLAGELAKAADKELQVIVDSMVSLCRELCPLSSSAAERLSPPLSSVSERVSIPRSAI
RTALMERAAQDIHRALEEVKLSVVSYLTNSIVDQILQELYATQKTLTRQVSQVKRWEGTC
DGGTGRRSHRHRDSLDITDEELGTSIDTIAIKKHSSRTRRIRPVSTRLSLCDDSSSSPPP
STSSSFSALSRSASCEGLSELPTQGAPLHHVTRVRPRPPRRHRAGHAPSDTHCTENGAVT
PLDDGLPDFYSKRVLPDRTATENVYTLLQPPRSAARACSPGEGADGKVEDQRGEEPVGLS
LQPLQSIPPQPGMPGSRHPFYSPSQPSKLETAHEQPADTDRHWSEDRQVDRQWTEGLHTD
RERTLIRPADRHSDRHWTEDKLSDKTWTEGRTAERQMDRYWTESRHADRLMERQWTVDRH
TQRQIDRQFDRDRQWTVSRQQTDRKWAEGRLTDIQIDRQWIESRQSGRQSDRQAQGQHLA
QRPLPPYPSDRTPSPKSETDSQKNMEATVDRQKYSDTQTDRHLHSDTAVGQVEGWRGGGE
VPPGRVSMNASKPDPPPQSSKPIQSKLRQRHLQESSGAEEEADGDRDGGRMERKERDRGR
DAEGQPPPIPEKPKTSYVSSPIEYANERPIPHLAPSAFNKPVLGLADRAFSQGEEAVRPQ
APVKPQRTRKAMSCDTDSVNSASVNRELL
NT seq
4410 nt
NT seq
+upstream
nt +downstream
nt
atgcttcggagagaagcaatccgttcggtccatcattgcgaaaggaaaaggggcggtgat
agaggaagaagagacatggcatctaaagacgtaactgcctcttgtttcgtcagtgtgagc
agggatattacagagagtatcaggaagattgttgacaagtcatccatcaagtttatacgc
ggcattaagcttgacaccaaaaatggcaagtcagaggaccggatactggtcctcacaaca
tggagactctatttcctgacagccaaggttccaacaaagattgaggtgacatttaacttc
ttggagatccgagccatgaacagtcacccagagtttcaggtcgtcatagacttggacaag
tccacttattccctgaggcttcagtcacgtgaccacctcagtcatgtggtcagccacgtt
aactttgccctgtccagaatattcaacaactctgttttctctccctccatctgtcattca
gacagtgacctttctgagggaagcaggaagtactcccccagctcagagacgtctgttgaa
acccagagggcctgtggagggttttccgagacctacgctgccctgtgtgactacaatgga
atcagctgcaaggaggaagtgcagtgggatgtggacactatctatcactctcaagacaac
agggagtttaacctagtggacttcagccacctggagagcagagacttggcagtgattgtg
gcctcaatggcatacaacacctggttcaccaaactatactgtaaggacctacgcataggg
tcagaggtcagtgagcaggttttgcacacactcagtaagtcctccagcctagaagagctc
actctggagaatgctggtctcaaatctgactttgcgcagaagctgtcagttgcgctctca
gagaatcctgcttctgtcatccactctctgaacttggcacacaacacattggacaaccaa
ggtgtgtctaacctcatccagcaggtgtgtcgtctcagcaaaggactgcgtctcctcaac
ctctccaagacctcccttaactccaaaggtgtggtgtctctgtctcaggctctgtgctcc
agtgatgagtattccaactctctactgcacctggacctgagcaagaaccctggggtcctg
tctggggaggacgcttcgaatctgtaccttttcctttcccagcctaattgtctggtccat
ttggacctgtctgacactgactgtgctgttgactctctatttggggctctgctgaggggg
tgttgtgctgatctctcctacttgaatctctccaaaaattccttctcacacaggaaagtg
aaggagaccctgccgttgttccgtcagttcttcagctcggccttcagtctcacccatgtc
agcctggcctctatgaagctaccccctgatgccctgaggtctcttttcataggtctgacc
acaaaccctcacattaatgaccttcacctggacatcagtggctgtgagctgaaatctgca
ggagcttctgtgatccaggagctgttccccagggtctcctccatcgccactctggacatc
tctgacaacgggctggatgcagaccttctctcagtcctaccagctctctccagacacacc
tccctaaagcacctgtatctgggcaagaacttcaacatcaagagcagcagggtgctggag
gaaatcctacagaagctggtccaactcatacaggaggaggaatgtgccctccagtccctc
tccctggctgactcgcggctgcgttctcgcggtacagtgctagtaaatgccctgggtagt
aacacctgcctacgtaaagtcgacctgagtgggaacagcctggaggacattggagccaag
atgctgagcaaagccctacagatcaacaccacactcaggagtgtgacgtgggatcgtaac
aacacctcagctacaggattcctggatgtggctcgagcccttgaacataacttcaccttg
cagtacatgcccctccccctcagtgacatcagccaggcgtaccgtagcacccccgagagg
acagagcaggcactgaccaagatccagcgtgccctgctgaggaacaaccagactcagcgc
ttctctcagagacaggctctacggctgcaccagggcctggtcaccagcactgctgaacag
gtgatggagcgtctgtgtgtgcgtgtacaacagcaggtgtgtgtgctgcgtggagtaggg
gagatggaggagattcaagctgctaaacaagtgctgaaggaggccaggaactctcgcgcg
ctgtacccctccctctgtgagctagctcatgtgctgtcagtagatgggccagtcagacag
agactggactcactggcaggagaactggccaaggcagctgacaaggaactacaggtgata
gttgactccatggtgtctctctgtcgtgagctgtgtccgctgtcctcctctgcagcagag
agattgagtcctccgctctcgtccgtctctgagcgtgtgtccatccctcgctcagccatc
cgtacggccctgatggagcgagcagctcaggacatccaccgcgcgctggaagaggtgaag
ctctcagtggtttcctatctcaccaactccattgtggatcagatcttgcaggagctctac
gccactcaaaagaccctgacgcgtcaggtgtcccaggtgaagcgttgggaggggacatgt
gatggagggacaggtcggaggtcacacagacacagagactctctggacatcacagacgag
gagctgggcaccagcatagacacaattgccattaagaagcacagctctagaactaggcga
atacgacctgtttcaaccagactgagcctgtgtgatgactccagctcctccccgcccccc
tctacgtcctcttctttctcagccctctctcgctccgcatcctgtgaggggctgtctgaa
ctccctacccagggtgcacctctacatcatgtgacgcgggttaggccgaggcccccacgg
agacaccgagcaggacacgccccctctgacacacattgcactgaaaatggagctgtcact
cctcttgatgatggactcccagatttctactccaagagagttctccctgataggacagcc
actgagaatgtctacacgctgctgcagccccctcgttctgctgccagggcctgctctcct
ggtgagggggctgatgggaaggtggaggaccagaggggggaagagccagtaggcctgagc
ctgcagccactgcagagcataccaccacagcctggcatgccgggcagcagacaccccttc
tactcacccagccagccatcaaagctagagacagcgcacgagcaacctgcagatactgac
agacattggtcagaggacagacaggtggacagacagtggacagaggggcttcacacagac
agagagaggacattaataagaccagctgacagacactctgaccggcactggaccgaggac
aaactgtcagacaaaacatggacagagggaagaacagcagagagacagatggacagatat
tggacagagagcaggcatgcagatagactcatggaaagacagtggacagttgacagacac
acacagagacagatcgacagacagtttgatcgagatagacagtggacggtgagcagacaa
cagacagacagaaagtgggcagagggacgactgacagacatacagatagacagacagtgg
atagagagcaggcagtcaggcagacagtctgacagacaagcccagggacaacatctggct
cagaggcctctgcccccttacccatcagacaggactccatcacctaaaagtgagactgac
tcccagaaaaacatggaggcaactgtggacagacagaagtactctgacacacagacagat
agacatctgcactcagacactgctgtaggacaggtggaagggtggaggggtggaggagag
gttccccctggacgggtttctatgaatgcatctaaaccagaccctcctccccaaagcagc
aaacccatccagtccaaactgagacagagacatctacaggagagctctggtgcagaggag
gaagcagacggagatagggatggtggaagaatggaaaggaaagagagagatcgaggcaga
gatgcagagggacagccacctcccattcctgaaaagccaaagacatcctatgtgtcttct
ccaattgagtatgcaaatgaaaggccgatcccacatcttgcaccatctgcattcaacaag
ccagtgctgggattggctgacagggctttcagtcaaggtgaggaagcagtgagacctcaa
gccccagtgaaaccccagaggaccagaaaggctatgtcttgtgacacagacagcgtcaac
tcagcgtctgttaacagagagctgttgtaa
DBGET
integrated database retrieval system
