KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112249343
Entry
112249343         CDS       T05605                                 
Name
(RefSeq) protein LSM14 homolog A isoform X1
  KO
K18749  protein LSM14
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:otw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:otw03019]
    112249343
Messenger RNA biogenesis [BR:otw03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     112249343
SSDB
Motif
Pfam: LSM14 FDF SM-ATX
Other DBs
NCBI-GeneID: 112249343
NCBI-ProteinID: XP_024274964
UniProt: A0A8C8LNR2
LinkDB
Position
LG04:72076800..72085028
AA seq 450 aa
MSGGTPYIGSKISLISKAEIRYEGILYTIDTENSTVALAKVRSFGTEDRPTDRPIPPRDE
VFEYIIFRGSDIKDLTVCEPPKATSSLPQDPAIVQSSIGSTNAPPPSFQSVGSYAPFSGR
APVPPYSQFNPSPLVSQQFGVVGGGRISPQLDTLRKSPSMEQAVQTSPTTAPAAPAPVGR
RSPAGPSARPITTLGNQKPPDILEQRRGPEVQKIPRTDSEQGGGDNRNHRQCAGGPPPQR
RGRGGGHRGRGRFNPHRDGPMKFDQDFDFETANAQFNKEEIEKEFQSKLKLKDDKPDKPE
KALNGDEKADSGVETQNSEGNAEEEEPVVANVYYDKTKSFFDNISSDDTRKAAERSGGSG
FPRRQTWAEERRMNSETFGIPLRHNRGRGGFRGSRGGVGFRGGRGRAMSRGSFGPPRGAP
PGFRGGFRGSSRGGREFVEYEYRKDNKVAA
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgagtggagggacaccctacatcgggagtaaaattagcctaatctcgaaggccgagatt
cgctatgagggaattttatacacaattgacaccgaaaattcgactgttgccctcgccaaa
gtccgctcctttggcactgaggatcgccctactgacaggccaattccaccacgggatgaa
gtcttcgaatacataatcttcagagggagtgacatcaaggacctgactgtttgcgagcca
ccaaaagccaccagctccctgcctcaggaccctgccattgttcaatcctctattggatcc
accaatgctccacccccatcattccagtctgtgggctcatatgcaccctttagcggcagg
gctcctgtccccccttacagccagtttaaccccagccccctggtgtcccagcagtttgga
gttgtcggtggaggtcgcatcagtccccagctggacactctgaggaagagcccttccatg
gagcaggcagtgcagacttcccccaccactgcccctgctgcacctgcaccagtgggacga
aggagcccagctggcccatcagccaggcccatcactaccctgggcaaccagaagcctcca
gacatcctggaacagaggaggggccctgaggttcagaaaatacccagaacagattccgag
caaggtggtggcgacaaccggaatcaccgtcaatgtgccggtggtcctccccctcagcgc
cgtggtcgtggaggtggtcaccgtggaagaggccgtttcaacccacacagggacggtccc
atgaagtttgatcaagactttgactttgagactgccaacgctcagttcaacaaggaggag
attgaaaaagagtttcagagcaaactcaaactgaaagatgacaagcctgataaaccagag
aaggctcttaatggagatgagaaggcagattctggagtggagacccagaacagtgaaggc
aatgctgaagaagaggaacctgtggtggccaacgtttactacgacaagactaagtccttc
tttgataacatttcttctgatgatacaaggaaagcagctgagcgatctggcggttcagga
ttcccaagaaggcagacttgggctgaggagaggaggatgaattcggagacctttggcatt
ccactgaggcacaaccgaggccgaggaggcttcagaggaagtcgtggcggcgtgggcttc
cgtgggggcagagggcgtgccatgagcagaggttcctttggacccccccgcggggcccca
cccggcttcaggggaggattccgaggaagcagcagaggtggccgggagtttgttgaatat
gaatacaggaaggataacaaagtggccgcgtag

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