Oncorhynchus tshawytscha (Chinook salmon): 112249359
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Entry
112249359 CDS
T05605
Name
(RefSeq) sal-like protein 1 isoform X1
KO
K19871
sal-like protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112249359
03036 Chromosome and associated proteins [BR:
otw03036
]
112249359
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
112249359
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
112249359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_jaz
zf-C2H2_4
zf-H2C2_2
zf-met
zf-C2H2_6
zf-C2H2_15
zf-C2H2_11
zf-C2HC_2
CLP_protease
B129_C2H2-zf
UBZ_FAAP20
zf-H2C2_5
Motif
Other DBs
NCBI-GeneID:
112249359
NCBI-ProteinID:
XP_042177136
UniProt:
A0AAZ3SH38
LinkDB
All DBs
Position
LG04:complement(72788183..72801568)
Genome browser
AA seq
1418 aa
AA seq
DB search
MSRRKQAKPQHFQSDPLLALSEHNGDTEEPCSEEDPPCKESDAHVCSRCCAEFFELSDLE
QHQKNCTKNQLVLIVNENPASPSGSFSPGSPPHNPDEQMNDMVNNTDQAQCSDLLEHNAL
DKEESMDVDVSGINVHPGHDNDGGSSNMEGGSNINMNTGEGNGHSSSRNSSGPAPGTSSV
SAPQLPPLGNLTDLGSISMINSNVIIENLQSTKVAVAQFTQETQRSSGSGSGGPRVAVPA
LMEQLLGLQQQQIHQLQLIEQIRHQILLLASQSPEMQVPPSISTPGGSLGPSANPLTTLS
SHLSQQLAAAAGLAQSLASQSASISSLKQLAERAQLPQSNNPSSGESSQSISSLGSSTVN
NVQSSSDKRPIHAISSNLHSQLSNPSHTKSSMPAFGIGSLLNPVTNPHLPQPPSGNHLFS
SSLPGIGTTVEDLNSLAALAQRKGKSPTSFEPKSSSEEAFFKHKCRFCAKVFGSDSALQI
HLRSHTGERPYKCNICGNRFSTRGNLKVHFQRHKEKYPHVQMNPYPVPEHLDNIPTSTGI
PYGMSMPPEKPVTSWLDSKPVLSTLTSSVGMLLPPTMPSLPPFIKKEDHSVAITSPPIST
KTDSGRDAAEPSMKSNDGLSEEAAALPTSNGKTEEGSHSSSFMASVSSESERNTEYTTSN
SPPMMTNPLMPLMSEQFKAKFPFGGLLDPLQGSETSKLQQLVENIDRKLTDPNECVICHR
VLSCQSALKMHYRTHTGERPFKCKVCGRAFTTKGNLKTHYTVHRAMPPLRVHHSCPICQK
KFTNAVVLQQHIRMHMGGQIPNTPLPDSYPESMGSDTGSFDERNFDENFDDLDNFSDDDM
EGMEGVEGMEDGPDSSVPDTPKSADASQDSLCNSPSHPEMVVQDGQEKNHHAHHNAYHNT
HHDIDYRIHHNNHHNNHLNNHHDNQHNSHHNPHQRLVEELQASRMKAMGNGGSMEGDCLT
NDSSSLGGDIESPSAGSPAVSESTSSMQPPSPTNGHPQHQRKSPSLEERQERQERQERHQ
RAMSLDHISASLMQHHPSSIGALDLTSCNPSKDPLGMLFPFRERGTFKNTACDICGKTFA
CQSALDIHYRSHTKERPFICTACNRGFSTKGNLKQHMLTHQMRDLPSQLFEPSNTSLSSS
PTPSLLSVNSLSSMIKSEVNGFLHGLHHQDHHRDHHRDHHRDHHRDHQDRDHHKDMPSNM
PHGLVTTSASTSPVLSASAPPRRTPKQHYCNTCGKTFSSSSALQIHERTHTGEKPFACHI
CGRAFTTKGNLKVHMGTHMWNSAPARRGRRLSVDGSMAFLGTNPVKFPEIFQKDMVSRVG
NGDPASFWNQYAAAFSNGLAMKTNEISVIQNGGLPSLSGRMGNGGSSPVGGLTGNLEKLH
STETSAALAGLEKMANAENGTHFRFTRFMEDNKEIATN
NT seq
4257 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggaggaaacaagcaaagccgcaacatttccaatcggaccctcttctggcttta
tccgagcacaatggggacacagaagagccctgctcggaggaagaccccccctgcaaggag
tcagatgcccatgtctgtagcagatgttgtgctgagttctttgaactatcagatcttgaa
caacaccagaagaattgcactaagaatcaattagttctgatagtgaatgagaatcctgcc
tctccttccggaagcttctcgcctggctcccctccacataatcctgatgagcagatgaat
gacatggttaataacactgatcaagcgcagtgcagtgaccttttggagcataacgctctt
gacaaagaagaatccatggacgtcgacgtttccggaatcaacgttcatcctggtcacgac
aatgatggaggcagcagcaacatggagggaggcagtaacatcaacatgaacacgggcgag
ggaaatggccacagttccagcaggaacagctccggaccagcaccgggcacctcgtccgtc
tctgccccccagctacctccgcttggaaacctgactgacctggggagcatctctatgatc
aacagcaatgtcatcatcgaaaacctgcagagcaccaaagtggctgtggcacagttcacc
caggagacgcagcgctcctctgggtctgggtccgggggccccagggtggcagtaccggcc
ctgatggagcaactcctgggcctgcagcagcaacagatccaccagctgcagctcattgaa
cagatccgtcaccagatcctgctactggcctcccagtcccctgaaatgcaggtgcccccc
agcatctcaacaccaggaggctcgttggggccgtcagccaacccactgaccacgctcagc
tcccatctctcacagcagctggctgcagctgcgggcttagcacagagcctggccagccag
tctgccagcatcagcagcctgaagcagctggctgaaagggcgcagctacctcagagcaac
aaccccagcagcggtgaatcatctcagagcatcagctcactggggtcgtccacagtcaac
aacgtccagtcgtcctctgacaagaggccaatacatgcgatcagcagcaacctccactct
cagctcagtaacccatcacacactaagtcatccatgccagcctttgggataggtagcctg
ttgaaccctgtaactaatccacatctacctcagcccccatctggaaaccacctgttttcc
agctccctgcccggtattggcaccacagtggaggacctcaactctctggctgcgctggcc
cagaggaaaggcaagtcaccaacttcatttgaacccaagagcagctcagaggaggcgttc
ttcaagcataagtgcagattttgtgccaaggtgttcgggagtgacagtgccttgcagatc
cacctgcgatctcacacaggtgagaggccgtacaagtgtaacatctgtggcaatcgcttc
tccacccgcggtaacttgaaggtccacttccagcgtcataaagagaagtatccacatgtt
cagatgaatccataccctgtccccgagcatttagacaatattccaacgagcaccggcatt
ccatatggtatgtcaatgcctccagagaagcctgtgaccagctggctggacagcaagcct
gttctctccactctgacctcatcagtgggcatgctgctcccaccaaccatgcccagcctg
ccgccattcattaaaaaagaggatcattcggtagccataaccagcccccccatttcgaca
aagactgactccggtcgtgacgctgctgagccatcaatgaaaagcaacgacgggttgtct
gaagaagctgcggccctgcctacatcaaacgggaaaactgaagagggcagtcactcgtcg
agcttcatggcgagcgtgagctctgagtctgagcgcaacacagaatacacaacttccaac
agcccacctatgatgaccaaccctcttatgcccctcatgtctgagcagttcaaggctaag
ttcccgtttgggggcctcttggacccgctccaggggtcggagacctccaagctgcagcag
ctggtggagaacatcgacaggaagttgacggaccccaatgagtgtgtcatttgccaccgt
gtgctcagctgtcagagcgctctgaaaatgcactaccgtactcacactggagagaggccc
ttcaagtgtaaagtgtgtggcagagccttcaccaccaaagggaacctgaagacccactac
accgtccaccgggccatgcctccactcagggtccatcactcctgccccatctgtcagaag
aagttcaccaatgcggtggtcctgcagcagcacatccgaatgcacatgggagggcagatc
ccaaacaccccactgccagacagctaccctgagtccatgggctccgacacaggctccttc
gatgagaggaacttcgatgagaacttcgatgacctggacaacttctctgatgatgatatg
gaggggatggaaggagtagaagggatggaagatggccctgacagcagcgtcccagacacc
cctaagtcagctgacgcctcccaagacagcctgtgcaattccccctctcaccccgagatg
gtcgtccaggacgggcaggagaaaaatcatcatgcccatcacaatgcctaccacaatacc
caccatgatattgactatagaatccaccacaacaaccaccataacaatcatcttaacaac
caccatgacaatcagcataacagccaccataacccccaccagaggctggtagaggagcta
caggccagcagaatgaaggccatggggaacggaggttcaatggaaggggactgccttact
aacgactcctcatccctaggtggggacatcgagagcccgagtgccgggagtccagcagtg
tcagaatctacctcttccatgcagcccccatcccctaccaatgggcacccccaacatcaa
cgtaaatcccccagcttggaggaaagacaggagaggcaggagagacaggagaggcaccag
agagctatgtccctggatcatatcagtgccagcctcatgcagcatcacccctctagcatc
ggggccctggacctgacatcctgcaacccgtctaaagacccactgggcatgctcttccca
tttcgtgagcgcggcacgttcaagaacacagcctgtgacatctgtgggaagacgtttgca
tgtcagagtgccttggacatccactaccgaagccataccaaagaaaggccgttcatttgc
acggcctgtaaccggggcttctcgaccaagggcaacctaaagcagcacatgctcacccac
cagatgagggacttgccctcgcagctcttcgaaccctctaacaccagcctctcctccagt
ccgaccccctccctcctctctgtgaactccctgtcctccatgatcaaatcagaggtcaac
ggcttcctccatggcctccaccaccaggaccaccacagggaccaccacagggaccaccac
agggatcaccacagggaccaccaggaccgagatcaccataaggacatgcccagcaacatg
ccccatggcctggtgaccacctcggcctctacatccccagtgctctcggcctctgcccct
ccacgccggacacccaagcagcactactgcaacacttgtgggaagaccttctcctcctcc
agcgctctgcagatacacgagaggacccacactggggagaagcccttcgcctgccacatc
tgtggtcgggctttcaccaccaaaggaaatctcaaggttcatatgggcacacacatgtgg
aacagcgcccctgccagacgcggccgccggctctctgtagacggctctatggccttcctg
ggcaccaaccctgtcaagttcccagagatcttccagaaggacatggtgtctagggtgggc
aacggagacccggctagcttctggaaccagtacgctgcagccttctccaacggcctggcc
atgaagaccaacgagatctctgtcatccagaacggaggcctgccgtctctgtcggggagg
atggggaacgggggcagctcgcccgtgggcggcctcacaggcaacctggagaagctgcac
agtacagaaaccagtgccgctctggctggcctggagaaaatggccaacgccgagaacggg
acccacttccgattcacacgtttcatggaggacaacaaagagattgccaccaactag
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integrated database retrieval system
