Oncorhynchus tshawytscha (Chinook salmon): 112249372
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Entry
112249372 CDS
T05605
Name
(RefSeq) tropomyosin alpha-1 chain isoform X1
KO
K10373
tropomyosin 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04260
Cardiac muscle contraction
otw04261
Adrenergic signaling in cardiomyocytes
otw04814
Motor proteins
otw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
112249372
04820 Cytoskeleton in muscle cells
112249372
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
112249372
04261 Adrenergic signaling in cardiomyocytes
112249372
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112249372
04147 Exosome [BR:
otw04147
]
112249372
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
112249372
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of microglial cells
112249372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
Laminin_II
CLZ
CCDC39
DUF745
ATG16
Rod_CreS
TMF_DNA_bd
PUMA_CC
Sec2p
FKBP15
HAUS1
Lebercilin
DUF3450
CENP-F_leu_zip
Exonuc_VII_L
DUF16
MscS_porin
Laminin_I
SlyX
EzrA
DUF1664
FPP
CC_Bre1
TMP_N
Fez1
Motif
Other DBs
NCBI-GeneID:
112249372
NCBI-ProteinID:
XP_024274998
LinkDB
All DBs
Position
Unknown
AA seq
284 aa
AA seq
DB search
MDAIKKKMQMLKLDKENALDRAEGAEGDKKAAEDKSKQLEDDLVALQKKLKGTEDELDKY
SESLKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALTKLEEAEKAA
DESERGMKVIENRASKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERTE
ERAELSEGKCAELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAE
FAERSVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSM
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggacgccatcaagaagaagatgcagatgcttaaactcgacaaggagaatgccctggac
agagctgagggagctgagggagacaagaaggcagcggaggacaagagcaaacagcttgag
gatgacctggtagcgctgcagaagaagctgaagggaacagaggatgagttggacaagtac
tctgagtctcttaaggatgcccaggagaaacttgaactcgctgagaagaaagccacagac
gccgaggctgatgtagcttccctgaacagacgtatccaactggttgaggaggagttggat
cgtgctcaggagcgtctggccacagctctgaccaagctggaggaggctgagaaggctgct
gatgagagtgagagaggcatgaaggtgattgaaaacagagcatcgaaggatgaggagaag
atggagctgcaggagatccagctgaaggaggctaagcacatcgctgaggaggctgacagg
aaatacgaggaggtcgcccgtaagctggtcattattgagagtgatctggaacgtacagag
gagcgcgctgagctctctgaaggcaaatgcgctgagcttgaggaagagttgaagacagtc
acaaacaacctgaagtctcttgaggctcaggcagagaagtactcacagaaggaggacaag
tacgaggaggagatcaaggttctcacagacaagctaaaggaggctgagacccgtgctgag
ttcgctgagaggtccgtggccaagcttgagaagaccattgatgatctggaggatgagttg
tatgcacagaagctaaagtacaaggccatcagcgaggagctggaccacgccctcaacgac
atgacctccatgtaa
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