Oncorhynchus tshawytscha (Chinook salmon): 112249384
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Entry
112249384 CDS
T05605
Symbol
arnt2
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator 2 isoform X1
KO
K15589
aryl hydrocarbon receptor nuclear translocator 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112249384 (arnt2)
Transcription factors [BR:
otw03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
112249384 (arnt2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS
HLH
PAS_9
Per3-like_PAS-A
PAS_4
PAS_2
bHLH_NCOA
bHLH_INO2
Motif
Other DBs
NCBI-GeneID:
112249384
NCBI-ProteinID:
XP_042172098
LinkDB
All DBs
Position
Unknown
AA seq
745 aa
AA seq
DB search
MATPAAVNPSEMGSELPGPVTMPGAVVGAGQVRMGGAMPGRGGKRRSGGMDFDDEDGEGP
SKFSRYDDDDQIPGDDKERYARENHSEIERRRRNKMTQYITELSDMVPTCSALARKPDKL
TILRMAVSHMKSMRGTGNTSTDGAYKPSFLTEQQGLQTLLLSKQELKHLILEAADGFLFV
VAAETGRVIYVSDSVTPVLNHPQSEWFGSTLYEQVHPDDVDKLREQLSTSENSMTGRILD
LKTGTVKKEGQQSSMRMCMGSRRSFICRMRCGSTPLDHISLNRLSNMRKRYRNGLGPSKE
GEDQYSVVHCTGYIKAWPPAGMTIPEEDTEAGQTSKYCLVAIGRLQVTSSPVSMDMNGLT
VPTEFLSRHNSDGIITFVDPRCINVIGYQPQDLLGKDILEFCHPEDQSHLRESFQQVVKL
KGQVLSVMYRFRMKNREWMLIRTSSFTFQNPYSDEIEYIICTNTNVKQLQQQQQAELEVH
QRDGLTAYDLSQVPVPSVGGGVHEAGKNTDKTDTMFSQERDPRFADMYSGISGSGEKKMM
VPSSTAGGQQLYSQNSPFQPGHSAKSFSSSVIHVPGVNDIQPSGSSNQNLAQISRQLNPG
QVAWTGNRPPFSGQSTKAQSSPFGIGSGHSYQGDPSSYSPLSSPATSSPSGNAYSGLANR
STAFDVSGEGSQSGGQFQGRPSEVWSQWQNQHHGQQGGEPHSHPNPSQTEVFQDMLPMAG
DPTQGTANYNIEDFADLGMFPPFSE
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggcaactcccgccgcggtcaatccatcggagatgggcagtgagttgccggggcccgtt
actatgccgggggcggtggtgggggcaggccaagtgaggatgggcggagccatgccgggc
cgcgggggcaagaggagatccggagggatggactttgatgacgaggatggggaaggacca
agtaaattttcaaggtatgatgatgatgatcagatacctggtgatgataaggagagatat
gccagagagaaccacagcgagatagagcggcgtcgccgtaacaagatgacccagtacata
acggagctgtcggacatggtgcccacctgcagcgctctggcccgcaagccagacaaactg
actatcctccgcatggccgtgtcccacatgaagtccatgagagggaccgggaacacgtcc
actgacggggcgtacaagccctccttcctgaccgaacagcagggtctacaaaccctcctc
ctcagcaaacaggagttgaagcacctcatcctggaggcggccgacggcttcctgtttgtg
gtcgccgcggagacgggccgcgtgatctacgtgtctgactcggtgacaccggtgctcaac
cacccgcagtcggagtggtttggcagcacgctgtatgaacaggtgcatcctgacgatgtg
gacaagttgcgggaacagctcagcacctcagagaattccatgacagggcgtatcctggac
ctgaagacaggaacagtgaagaaagaggggcaacagtcgtctatgaggatgtgcatgggc
tccagacgatccttcatctgcagaatgagatgtggcagcaccccactggaccacatctct
ctcaaccgactgtccaacatgaggaagagatacaggaacggtctgggaccctcgaaggag
ggagaggatcagtactctgtggtgcactgtaccggctacatcaaagcatggcccccagca
ggtatgaccataccagaagaagacacagaggcaggacagaccagtaaatactgccttgta
gccatcggaagactgcaggtgaccagttctcccgtttccatggatatgaacggcctgacg
gttcccacagagttcctgtcgcgccacaactccgacggcatcatcactttcgtggacccg
cggtgcatcaacgtgattggataccagcctcaggatctgctggggaaagacatcctggag
ttctgtcacccagaggaccagagtcacctgagagagagctttcaacaggtggtaaagttg
aaaggccaggtgttgtctgtaatgtacaggtttcgtatgaagaacagagagtggatgtta
atccgcaccagctccttcaccttccagaacccctactccgatgagatcgagtacatcatc
tgtaccaacaccaacgtcaagcagctccaacagcagcagcaggcagagctggaggtccat
cagagagacggcctgacagcctacgacctgtctcaggtgcccgttcccagtgtgggagga
ggggttcacgaggcgggcaagaacactgacaagacggacaccatgttctcacaggagaga
gacccacgctttgctgacatgtactccggcatctctggctctggtgagaagaaaatgatg
gttccttcgtctacagcgggaggtcagcagctctactcccagaactctcccttccagccc
ggacactctgccaagagcttcagctcctcagtgatccatgtcccgggggtgaacgatatc
cagccgtcgggatcgtccaatcagaacctagctcagatctccagacagctcaacccagga
caggtggcctggactggcaacagacccccgttctctggccagtccactaaggcccagtcc
agtccgtttgggataggctctggccacagttaccaaggagacccatcttcctatagcccc
ctgtcctcccctgccacctcatcgcccagcggcaatgcctactctggactggccaaccgg
agcacggcgttcgatgtgtcaggagagggcagtcagagtgggggtcagttccagggtcgg
cctagtgaggtctggtcccaatggcagaaccagcaccatggccaacagggaggagagcca
cactctcaccccaacccctcccagacagaggtgttccaggacatgttgccgatggcagga
gacccaacacaaggaacagccaactacaacattgaagactttgctgatctgggcatgttc
cctcccttctccgagtag
DBGET
integrated database retrieval system
