Oncorhynchus tshawytscha (Chinook salmon): 112249422
Help
Entry
112249422 CDS
T05605
Name
(RefSeq) iporin
KO
K23291
iporin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112249422
Membrane trafficking [BR:
otw04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
112249422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RUN
SH3_9
SH3_2
SH3_1
Motif
Other DBs
NCBI-GeneID:
112249422
NCBI-ProteinID:
XP_042177185
LinkDB
All DBs
Position
LG04:complement(6860912..6921792)
Genome browser
AA seq
1868 aa
AA seq
DB search
MDSPSKLSGETLIVHHIPLVHCQVTGGRQGYSGGGGGSLKRSNQPENLGLSPTTSLPERD
VLQREALVYSSLIQTSTGGGGGRGREGRGGGEREGRGGGDSGGHGGERGGGRGVGERGEG
GRGEGVGGGSTGSDNLSVTSSNSEDQVMVDNTLLRVKPREQANNPLRLRHNPFLLNTEEE
DDDEEEEDEDDSDNLNGYLEDSSFHLHGNTNSALDEEGDGVTPFHLHDLGFTTHEPFLLQ
STLGKHSWGCSGGRDSLRGVASDLSAHLEGLDLLVLDGPRRHGSSGSTLSMDCGEQEWAE
DDEEEEEDPMRGGGRSSSQADSSSSSSAHQLCSCYGLSQTFHEHFPEQFSQSLECQLGYG
SESSCNSSDGMLVNFSAIYNKINNSVPSTSSEPPPPATTTNLNSSTDHSYTSSVCTSSVL
GREAGNPGRARDRGAFYLDLHTSPTEPPNSHQPSCSSNSTRSFGLHPYTNTSACTCSAEH
QGALDLDANCNSYQPPHHSDSGSDLTSCLQSQAHLVVATQNYYKLVTCDLSSQSPPSPVG
SSASFTSCSDEHSKESPAPDTPNTTQPTEYYLFRRPPGGEEKEAEEEDEEGELSQRDENE
EEDDDEEEERKKREQQQLGGACSDLIIEGQVYINISPPVVDRGPIGGGTPRSRSYDRNLD
KSPPPRLGSLERMLSCPVHLSEGAVPLGPPTPPRVTSFAEIARSKRKNRGSTGSPSLRTG
GCSDPFSSTHSAHSHSSAHSNSSTHSPPRPTPTPRPTPTPRPLLGPLPLLGPLPLLGPLL
GPLPLLGPLPLLGPLPLLGRLLPHPGEPGSGSEPQCALPALLQPGQCGPPWWWRQLCGLS
SSLCSSAVVRYTKDQRPTTLPIQPFTFHHQFSKLSQPKPILPLLTGYVSGMQARGGGPSG
GPEGSDGVGDDRWEDSLRRCQSGGTMGGMVSEVAPLGPGSVRPSPLGSYSPVRLQGLTST
SCSTCTPSPQTPRSLSCPLSAELLPLHYTHPPPARLAAAPLPPTPPPPPQGVKRGAVPPM
LPPVQGQVQGQCHQHYHRGTLPVLPVVLQDSEISLRYEETSDFVEGSRGPGSATQHGHHL
SPQTLKWREYRRRNPLGVERCSSGGSGVPALSGSLDGNGRRGVARGQRITRRNVFDFPPA
SSGHAPLGRLNGQSVKQLQQHYSDFLPDYFSLTERPPDEFCLSPDASSSSSSSTSSQSHI
SVNLQQKRGLVKAINTAVDLIVAHFGTSRDPDVKAKLGNSWVSPNVGHLILKYLCPALRE
VLGDGLKAYVLDLIIGQRRNQPWSLVEASTQLAIPTSGPSTCVVHSLFSKVSQYSELTSH
SMRLNSFIFGLLNLRSLEFWFNHLYTHEDIVAAHYHPWGFLPLSQGPCQPLLEELLLLLQ
PLSLLPFDLDLLFEPRLVQRNQEHLRSKEQLRSASAGQGLDQSACSTFQLMRGWSSESRR
AESMREGAEVKKEGGGVGNRERLGLRREGTWPRMEGVGERGRREGMMQRMGSRREGVGID
SLGAGLVEAQPMTTEVGTGFANLWRESGRGKGTGKRVKGVGGVRHEEEGEKEERRKGIER
DWAEEGRQQQERDRQAGWWYQLMQSSQVYIDQSAQGGSKFVKSEKRKKSAERRSQSQHPL
PRKGVVEGAESSQEEEVLRERSRKSSSSGEWMGSRGRGRPSWMGSPPESVLTQDKEKEKD
PGTTRATEATATQPAAQTEDPSLGQSMRWVRLFGSSMGGGGPPSRPDGAEQRPSKSRRSR
LPSGWLTGLDMSVLDLLVQTVGVGTVKRVEPSAPPAPPTLNQPSPPPQPPQETQTKQLCE
VRALCHHIATEPDQLSFHKGDVLSVLSRADSDWLLCSLGAQRGLVPFIYVTLRGLEDSQA
AQEPQGPL
NT seq
5607 nt
NT seq
+upstream
nt +downstream
nt
atggacagcccctccaagctgtctggcgagaccctgatcgttcatcacatccccctggta
cactgccaggtgactgggggtcggcagggctacagcggaggaggaggggggtccctgaag
agatcgaaccaaccagagaacctgggcctgagccccaccacctccctccctgagcgagat
gtactccagagggaagccctggtgtacagcagcctcatccagacctctacaggaggagga
ggaggaagaggaagagaaggaagagggggaggagaaagagagggaagagggggaggagat
agtggaggacatggaggagagagaggaggaggacgaggagtaggagaacgaggagaagga
gggagaggagaaggagtaggaggcggcagcacagggagcgataatttgtctgtgacgtct
agtaactcggaggaccaggtgatggtggacaacactctgctcagggtgaaaccaagggaa
caggccaacaaccctctccggctccgccacaacccttttctgctcaacacggaggaggag
gatgatgacgaggaggaagaggacgaagacgatagtgataatctcaacggttacctggaa
gattcatccttccatctccatggcaatacaaactccgccctagatgaggagggagacggg
gtcacgccctttcacctccacgacctggggttcaccacacacgagcccttcctgttgcaa
agcaccctgggaaagcactcctggggctgctctgggggacgggattccctcaggggtgtt
gcctccgatctctccgcccacctggagggcctagacctgctggtattggatggtcctcgc
cgacacggcagcagcggctccaccctctccatggactgcggagagcaggagtgggccgag
gatgatgaggaggaggaggaagacccaatgaggggtggtgggaggagcagtagccaggct
gactcgtcttcctccagctccgcccaccagctctgctcctgctacggcctctcacagacg
tttcacgaacacttcccagaacagttttcccagtcgttggaatgccagctaggctacggc
agtgaatcgtcctgcaacagctcggatggcatgctggtcaacttcagtgccatttataac
aagatcaataacagtgtcccttcgacctcctccgagccacctcctcctgccacgaccacc
aacctgaacagttccactgaccactcctacacctcctctgtctgcacctcttctgtactg
ggtagggaggcagggaacccaggaagagccagagacaggggtgctttctacctcgacctc
cacacttcccccaccgagccccccaactctcatcaaccatcttgctcctccaatagcacc
cggtcgtttggactccacccctacaccaacacctccgcatgcacctgctcagccgaacac
cagggggcgctagatctggacgccaactgcaattcttaccagcctccccaccactcagac
tcaggaagtgacctcacatcctgtctgcagagtcaggcccatctcgtggtagccacccag
aactactacaagttggtgacctgtgacctttcatctcagtcgccaccgagccctgtggga
agctccgcgtcgtttaccagctgctctgacgagcacagcaaggaaagccccgctcccgac
acgcctaacaccacccagccaaccgaatactacctgttcagacggccacctgggggagag
gaaaaggaggccgaagaggaagatgaggagggagagttgtcacagcgtgatgaaaatgag
gaagaggatgatgacgaggaagaggagaggaagaagagggagcagcagcagttgggtgga
gcctgttcagacctcatcatcgagggacaggtgtacattaacatctcccctcccgtggtt
gaccgaggacccatcggaggcgggactccccgttcccgtagctacgaccggaacctggac
aagtccccgccccctcggcttggctcattggagcgcatgctgagctgccctgttcatctc
agtgagggcgccgtccccctcggccctcccactccgccacgggtcacttccttcgctgag
atcgccaggagcaagaggaaaaacagaggaagcactggctctccttctctcaggacgggg
ggatgttcagatcccttctcctccacccactcggcccactcccactcctcggcccactcc
aactcctcgacccactcccctcctcggcccactcccactcctcggcccactcccactcct
cggcccctcctcggaccactcccactcctcgggccactcccactcctcggcccactcctc
gggccactcccactcctcgggccactcccactcctcggcccactcccactcctcggccga
cttctcccccatcctggagaacctgggtcagggtccgagccacagtgtgcccttccagcg
ctgctccagccagggcagtgtggaccgccctggtggtggcgccaactgtgtggtctctcc
agctctttgtgcagctctgctgttgtccgctacactaaagaccagcgtcctaccaccctc
cccattcaacccttcaccttccaccaccagttctccaagctgtcccagcccaagcccatt
cttcccctgctgacgggctacgtttctgggatgcaggcgcggggtggagggccttctgga
ggtccagaggggtctgatggagtcggcgacgaccgatgggaagactctttgcgtcgatgc
cagagtgggggtacgatgggtgggatggtatcagaggtggcaccgctcggccctggctct
gtccggccctcgccgctgggtagctattcccccgtccgtctccaggggctgacctccact
tcctgttctacctgcacccccagcccccagactcctcgcagcctctcctgccccctgtcg
gccgagctcctgcccctccattatacccatccaccaccagcacgactggcggctgcccct
ctgcctcccactcctccacctccgccccagggggtgaagcggggtgctgtgccccccatg
ctgcctccggtccagggccaggtgcagggtcagtgtcaccagcactaccaccgtgggacc
ctccccgtcctgccggtcgtgctccaggacagtgagatttcactgcgatacgaggagacg
tcagactttgtggaggggagcagaggaccagggtccgcgacacaacatggacaccacctc
tctccccagactctgaaatggagggagtatcgtcgtaggaaccccctgggggtggagagg
tgttcctctgggggatcaggcgtacctgccctatcaggcagtctggatgggaatggtcgt
aggggcgtggccaggggacagcgaatcacacgacggaatgtgtttgacttccctccggcc
tctagtggccacgcccccctgggacgactcaatggccagtctgtgaagcagctgcagcag
cactacagtgacttcctgccagactacttctccctgacggagcgtcctccagacgagttc
tgtctctctcctgacgcctcctcttcgtcatcgtcctccacttcctcacaatcccacatc
tctgtgaacctacagcagaagagaggtttagtcaaagccatcaatacagcagtagattta
atcgtggctcattttggcaccagtcgggaccctgatgttaaggcgaagctgggtaacagt
tgggtgagtcccaacgtgggtcacctgatcctgaagtacctgtgtccggctctaagggag
gtgctgggggatgggctgaaggcctacgtcctggacctgatcatcggacagagacgcaac
cagccctggagcctggtagaggcctccacacaactagcgatacctacatcaggcccatcc
acctgtgttgtccacagcctgttctccaaggtgtcccagtactcagagctcaccagccac
agcatgagactcaactcattcatctttggactgctgaacttgcgatctttggaattttgg
ttcaaccatctctacactcatgaagacatcgtagcggctcactaccacccgtggggtttc
ctgccgttgtcccaggggccgtgccagcctctcttggaggagctcctcctcctcctccag
cctctgtctctgttgccctttgatctggatctgctctttgagccgcgattggtccagagg
aaccaggaacacctgagaagcaaggaacagctccgctccgcctccgctggccagggcctg
gaccaatcagcatgctccaccttccagctcatgagggggtggagctctgagtcacggaga
gcagagtctatgagagaaggggcggaggttaaaaaggaaggaggcggggtggggaacaga
gaaaggttggggctgagacgagaggggacgtggcctaggatggaaggggttggagagaga
gggaggagagaggggatgatgcagaggatggggtcgaggagagagggggtggggatcgat
agtttgggggcggggcttgtagaagcacagccaatgacaaccgaagtagggacaggattt
gcaaacctgtggagagagagcgggagagggaagggcacaggaaagagagtgaagggtgtg
ggaggagtacgccatgaggaggagggagagaaggaagagaggaggaaggggatagagagg
gattgggcggaggagggtcgtcagcagcaggagcgtgatcgccaggcgggctggtggtac
cagctcatgcagagttcccaggtctacatcgaccaatcagctcagggtgggtcgaagttt
gttaagagcgagaagaggaagaagtctgcagagaggcggagccagagtcagcacccactc
cccaggaagggtgttgtggaaggggcagagtctagccaggaagaggaggttcttagggag
agaagcaggaagagcagctccagtggtgagtggatggggtccaggggaagaggaagacca
tcctggatggggagtccaccagagtcagtgctcacccaggacaaggagaaagagaaggat
ccaggaaccacaagggccacagaagccacagcgacccagccagcagcccagactgaagac
ccctccctgggccagagcatgcgctgggtcagactatttgggtccagcatgggtggtggt
ggccccccctccaggccagatggagcagagcagagaccatccaaaagcaggaggagcagg
ctgccgtctggatggctgacaggtctggacatgtccgtgctggacctcttagtccagacg
gtgggggtggggacagtgaagagggtggagccttcagctcctccggcccctcccactctg
aaccaaccctctccacctcctcagccgccacaggagacccaaaccaaacagctgtgtgag
gtgcgtgccctgtgccaccacatagccacagagcctgaccagctgagtttccataaaggg
gacgtactgagtgtcctgagccgggctgactccgactggctcctctgctccctgggggcc
cagcggggcctggtgcctttcatctacgtcaccctgaggggtctggaggacagccaggcg
gcccaagagcctcaggggccactctga
DBGET
integrated database retrieval system
