Oncorhynchus tshawytscha (Chinook salmon): 112249431
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Entry
112249431 CDS
T05605
Name
(RefSeq) glutamate receptor ionotropic, delta-2
KO
K05207
glutamate receptor delta-2 subunit
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112249431
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
112249431
Ion channels [BR:
otw04040
]
Ligand-gated channels
Glutamate (ionotropic)
112249431
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
DUF6724
Motif
Other DBs
NCBI-GeneID:
112249431
NCBI-ProteinID:
XP_042176240
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All DBs
Position
LG04:complement(10521792..11246311)
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AA seq
1009 aa
AA seq
DB search
MKVVSAVLFLAIIWSQEWEPVLSDSIIHIGAIFDESARKDDEVFRMAVADLNLNNEILET
EKITISVEFVDGNNPFQAVQEACELMNRGILALISSVGCMSAGSLQTLADAMHIPHLFIQ
RAPAGTPRSSCPLVSRGRQDDYTLFVRPPVYLNDVILQVVNEYSWQKFIIFYDQEYDIRG
IQDFLDKTSQQGMDVSLQKVESNINMMITSMFRTMRVEELHRYRDTLRRAVLFMSPVTAK
AFITEVVETNLMAFDCHWIIINEEISDQDVQELVMKSIGRLTLIRQTFPLPQNTSQRCVK
HNHRINTSLCDPKDPKAQTLEITNRYIYDTVLLLANTFHRKLEDRKWHSMASLTCIRKNS
KPWQGGRPMLDNVKKSGVSGLTGFLEFTDNGTNPNIYFEILGTNYGEDRGRGVSKLATWD
PVHGLNGTLTDRKLENNMRGVVLRVVTVLEEPFVMVSENVLGKPKKYQGYSIDVLDSLSN
YLGFKYEIYVAPDHKYGSQQSDGVWNGLMGELVAKRADVGLSALTITPERESAVDFTTRY
MDYSVGVLLRKAERTVDMFACLAPFDLSLWACIAGTVLLVGILVYLLNWLNPPRLPMGAV
SSTTFYNSMWFVYGSFVQQGGEVPYTTLATRMMMGVWWLFALIVISSYTANLAAFLTITR
IENSIQSLQDLSKQTELPYGTVLDSAVYEQVRSKAMNPFERDPMYSQMWRMINRTGGAEN
NVDESKEGIRKVKYGRFAFVWDSAVLEYMAINDEDCSFYTVGSNAPDRGYGFAMQHGSPY
RDIFSQRILELQQNGDMDILKLKWWPRDSPCDLYSAVHTKHRGSALDIHSFAGVFCVLAA
GVVLSCVIAMVETWWTRRKGSRVPSKEDDKEIDLEHLHRRVNSLCAEDDSPHKQFSTSSI
DLTPLDMDSMPAARQALEQISDFRNTHITTTTFIPEQIQTLSRSLSTKAQQGFAFGPVQD
HRTGGTFRQRAPNGGFFRSPIKTMSSIPYQPTPQPNFSYGNDPDRGTSI
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttgtttcagcagtgttgttccttgccataatttggagtcaggagtgggagccc
gtgctttctgattcaatcatacacatcggggccatctttgatgagtctgccaggaaggac
gacgaggtgttccgcatggccgtggcggacctcaacctcaacaatgagatcctggagact
gagaagatcaccatctctgtggagtttgtggatgggaacaaccctttccaggcagtccag
gaagcctgtgagttgatgaacagggggatcctggctcttattagctcagttggctgtatg
tcggcgggctccctgcagacgctggcggacgccatgcacatcccgcacctgttcatccag
cgtgcccccgccggcacccctcgctccagctgtcctctcgtcagccgcggtcgccaggac
gactacaccctcttcgttcgcccgcccgtctacctcaacgacgtcatcctccaagtggtc
aacgagtacagctggcagaagttcatcatcttctacgaccaggaatacgatatccgtggg
atccaggacttcctggacaagacgtctcagcagggcatggacgtgtcgctgcagaaggtg
gagtccaacatcaacatgatgatcaccagcatgttcagaaccatgagggtggaggagctc
caccgctaccgggacacgctgcgccgggccgtgctcttcatgagtcctgtcaccgccaag
gcctttatcactgaggttgtggagacgaatctcatggcattcgactgtcactggatcatc
atcaatgaggaaatctcagaccaggacgtccaagaactggtgatgaagtcaattgggcgt
ctgaccctgatcaggcagaccttccccctgccccagaacaccagccagcgctgtgtcaag
cacaaccaccgcatcaacacctccctctgcgaccccaaggaccccaaagctcagacactg
gagatcaccaaccgctacatctacgacacagtgctgctattggccaacactttccacagg
aagctggaggacaggaagtggcacagcatggccagcctcacctgtatccgcaaaaactct
aagccctggcaaggaggacggcctatgctggacaatgtcaaaaagtctggagtgagtggt
ctgactggcttcctggagtttacagacaacggaaccaaccccaacatctactttgagatc
ctggggaccaactatggcgaggacaggggcaggggtgtcagtaagctggccacctgggac
ccagtgcacggcctcaacggaacgctgacagacaggaagctggagaacaacatgaggggc
gtggttctgcgagtggtcactgtcctggaggagccctttgtgatggtgtcagagaatgtc
cttgggaagcctaagaagtaccaaggttactccatcgacgtactggattccctctctaac
tacctgggcttcaagtacgagatatatgtggcccctgaccataagtatgggagccaacag
tccgacggggtctggaacggactgatgggagagctggtcgccaagcgggcagacgtgggt
ctctcggctctcactatcacgccagaacgggagagtgcggtggacttcaccacacgctac
atggactactcggtgggtgtgctgctcaggaaggccgagcgtaccgtggacatgttcgcc
tgcctagcgccctttgacctgtcgttgtgggcgtgcattgcgggcaccgtgctgctggtg
ggcatcctggtctacctactcaactggttgaacccgccgcgcctgcccatgggtgctgtc
tcctccaccaccttctacaattccatgtggttcgtctatggatccttcgtccagcagggt
ggtgaagttccgtataccaccctggccacaaggatgatgatgggggtatggtggctcttt
gctctaatcgtcatctcctcctacacggccaacctggctgccttcctcaccatcacccgc
atcgagaactctatccagtctctccaagacctttccaagcagacagagttgccgtacggg
acggtgttggactcggctgtgtatgagcaggtgcgcagtaaggccatgaacccctttgag
agggaccccatgtactcccagatgtggcgcatgatcaaccgcaccggaggggccgaaaac
aacgtggacgagtccaaggagggcatccgcaaggtgaagtacgggcgttttgcctttgtg
tgggattcggcggtgctggagtatatggccatcaacgacgaggactgctccttctacact
gtggggagcaatgcaccagatcggggctacggcttcgccatgcagcacggcagtccatac
agggacatcttctcccagaggatcctggagctgcagcagaacggggacatggacatcctg
aagctgaagtggtggccccgggacagcccatgtgacctgtactcagcggtgcacaccaaa
caccgcggcagtgccctggacatccacagcttcgccggcgtgttctgtgtgctagcggcc
ggagtggtgctctcctgtgtcattgccatggtggagacctggtggactaggaggaagggc
tcacgagtcccctccaaggaggacgataaggagatcgacctggagcaccttcaccgccgg
gttaacagcctgtgcgcggaggacgacagcccccacaagcagttctccacctcctctatt
gacctgacgcccctggacatggactctatgccggctgcccggcaggccctggaacagatc
agcgacttccgcaacacgcacatcaccaccaccaccttcatccccgagcagatccagacc
ctcagccgcagcctgtccaccaaggcccaacagggcttcgccttcggtcccgtgcaggac
caccggactgggggaaccttcaggcagagagcccccaacggtggcttcttccgcagtccc
atcaagacaatgtcctccataccctaccagcccactccccagcccaacttcagctacggc
aacgaccccgatcggggtacatccatatga
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