Oncorhynchus tshawytscha (Chinook salmon): 112249437
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Entry
112249437 CDS
T05605
Name
(RefSeq) myocyte-specific enhancer factor 2C isoform X1
KO
K04454
MADS-box transcription enhancer factor 2C
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04010
MAPK signaling pathway
otw04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
112249437
04371 Apelin signaling pathway
112249437
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112249437
Transcription factors [BR:
otw03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, MEF-2
112249437
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SRF-TF
HJURP_C
Motif
Other DBs
NCBI-GeneID:
112249437
NCBI-ProteinID:
XP_042176301
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Position
LG04:complement(16180214..16290746)
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AA seq
472 aa
AA seq
DB search
MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYAST
DMDKVLLKYTEYNEPHESRTNSDIVETLRKKGLNGCDSPDPDADDSIGHSPESEEKYRKI
NEDIDLMISRQRLCQGVPSSNYEMPVSIPVNNQNSLIYSHPGGSLGNHNLLPLAHHMQRN
SMSPGVTHRPPSAGGLMGADLTTGAGTSAGNGYGNHHRNSPGLLVSPGSMNKSMQAKSPP
TMNLGMNSNRKPDLRVLVPPGVKNNMPSINQRINNSQSAQSLATPVVSVATPTLPGQGMG
GYPSAMSTSYGTEYSLSSADLSSLSGFNSGSSLHLGSMSGWQQQHLQNMQQHSALSQLGN
CNSNHLCHNSNLSLPSAQSLHIKSEPVSPPRDRTSSTPGGYGVPQQQNPSSRQDSGRSPV
DSLSSCSSSHEGSDRDDHRNEFHSPLGMSRPALDGCESPSVKRVRLSEGWAT
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggggaggaaaaagattcagatcacgcggattatggatgaacgcaacagacaggtgacg
tttacgaagaggaagtttggcctgatgaagaaggcgtatgagctgagtgtgctgtgtgac
tgtgagatcgctctcatcatcttcaacagcaccaataagctgttccagtacgccagcacc
gatatggacaaggtgctgctcaagtacaccgagtacaacgagccccacgagagcaggacc
aactctgacattgtggaaacattgagaaagaagggcctaaatggctgtgacagccctgac
cccgacgcagatgactccatcggccacagccctgagtctgaggaaaagtacaggaaaata
aatgaagacattgatctgatgatcagcagacagagactgtgtcagggtgttccctcctcc
aactatgagatgccggtgtccatccctgttaacaaccagaacagtctcatctacagccac
ccaggaggttccctaggcaaccacaacctgctgcccctggcacaccacatgcagaggaac
agcatgtcccccggtgtcacacatagacctcccagtgcaggtggcctcatgggtgctgac
ctcaccactggtgcgggcaccagtgctggcaatggctacgggaaccaccaccgtaactcg
cctggtctactggtctctccgggcagcatgaacaagagcatgcaggccaagtctcccccg
accatgaacctgggaatgaacagcaaccgcaagcctgacctgcgggtgcttgtcccccct
ggagtcaagaacaacatgccctccatcaaccagagaataaacaactcccagtctgcacag
tcattggccacccctgtggtttcagtagcaacgcccaccctaccaggacaaggaatgggc
ggttacccatcagccatgtccacttcatacggtactgaatactcgctgagcagtgcagac
ctgtcctccctgtctggctttaacagtggtagctccctccacctgggctccatgagcgga
tggcaacagcaacacctccagaacatgcagcagcactctgccctcagtcagctaggaaat
tgcaatagcaatcacttatgtcacaattcaaatctctccctgccttctgctcaaagcctg
cacatcaagtccgaacctgtttctcctcctagagatcgcaccagcagcacaccggggggc
tacggcgtcccgcagcaacagaacccctcgtctcgccaggactcaggccgctcccctgtc
gacagcctgagtagctgcagcagctcccacgagggcagcgaccgcgacgatcacaggaac
gagttccactctccactgggaatgtcccggcccgccctggacgggtgcgagagcccctcg
gtcaaacgcgtgcgcctgtccgagggatgggccacatga
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