Oncorhynchus tshawytscha (Chinook salmon): 112249449
Help
Entry
112249449 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase-like
KO
K00727
beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase [EC:
2.4.1.102
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00512
Mucin type O-glycan biosynthesis
otw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
112249449
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
otw01003
]
112249449
Enzymes [BR:
otw01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.102 beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase
112249449
Glycosyltransferases [BR:
otw01003
]
Glycan extension
O-Glycan
112249449
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Branch
TRIC
Motif
Other DBs
NCBI-GeneID:
112249449
NCBI-ProteinID:
XP_024275059
LinkDB
All DBs
Position
LG04:complement(18750084..18751349)
Genome browser
AA seq
377 aa
AA seq
DB search
MCLLLELCEAVIWDADHIPQDDSVCSANLQGNKMVIEPAKVLSISRSFLNSTWVPDEHYL
ELTQDYQRFSSTRKLLEYPLSCEEEYFPLAFSLVVHHKVENFERLLRGIYAPQNFYCVHV
DIKAKASFLASIIAITSCFENVFLASHPVSVVYASWSHVQADINCISDLYRASSHWKYFI
NLCGQDFPIKTNLEMVRSLWALAGDNSMESEARPRGKKSRWKKVHQVVDGKLQRTEQNKA
PPPFGIPILSVGAYIVVNRGFVRAALEDSKVLALIRWDNETWSPDEFLWATIQRLPGVPG
SMRPKLDMTDMHALARLVKWPWYKXGIYVKVMCVYGAGDLQWMLQQHHLFANKFDTDPIA
IRRLEEHLKHKALAEIY
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgtgtctgttacttgaactctgtgaagcagttatttgggacgccgatcacatcccgcag
gatgacagtgtctgcagcgccaacctgcaaggcaacaagatggtcatcgagccggctaag
gtcctgtccatttcacgcagcttcctcaacagcacgtgggtcccagacgagcactacctg
gagctgacccaggactatcagaggttcagttctacgcgcaagttactggagtacccactg
agttgtgaggaagaatacttccccctggccttctcgctggttgtccaccacaaggttgag
aactttgagaggctgcttagaggcatctacgccccccaaaacttttactgcgtccatgtg
gatataaaggccaaagcgtccttccttgcttccatcatagccatcacatcctgctttgaa
aatgtgttcttggccagccatccggtcagtgtggtgtacgcgagctggagccatgtccag
gctgacatcaactgtataagtgatctgtacagggctagttcacactggaagtatttcatt
aacctctgtggccaggacttccccatcaagaccaacctggagatggtgcgcagcctgtgg
gcgctggcaggggacaacagcatggagtcggaggccaggcccagaggtaagaagtcgcgc
tggaagaaagtgcatcaggttgttgatggcaaacttcaaagaacagagcagaacaaagct
cctccgccctttggtatacccatcttgtcagttggggcatacattgtggtgaataggggc
tttgtgcgtgctgcgctggaggacagcaaggtgttggctcttattcggtgggataatgag
acttggagtcctgatgagttcctgtgggccaccatccagaggcttcctggcgtgcccggc
tccatgcgccccaagttagacatgacggacatgcatgcccttgccaggctggtgaagtgg
ccgtggtataaanggggtatctatgttaaagtgatgtgtgtatatggggccggagacctg
cagtggatgctgcagcagcaccacctctttgccaacaagtttgacacggaccccattgct
atcagacgtctggaggagcaccttaagcataaggccctggcagaaatatactaa
DBGET
integrated database retrieval system
