Oncorhynchus tshawytscha (Chinook salmon): 112249494
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Entry
112249494 CDS
T05605
Name
(RefSeq) tetratricopeptide repeat protein 28-like isoform X1
KO
K24936
tetratricopeptide repeat protein 28
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
otw03037
]
112249494
Cilium and associated proteins [BR:
otw03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
112249494
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_8
TPR_2
TPR_10
TPR_MalT
TPR_16
TPR_17
RPN7
TPR_11
TPR_14
TPR_NPHP3
TPR_9
TPR_19
TPR_6
PUB
AP4E_app_platf
Wzy_C_2
Motif
Other DBs
NCBI-GeneID:
112249494
NCBI-ProteinID:
XP_042176527
LinkDB
All DBs
Position
LG04:complement(29440575..29789779)
Genome browser
AA seq
2474 aa
AA seq
DB search
MEKQATVKEKFSIFGSRTVGRAAQREAEEKGGRSGLNKAEFMERVQQSNEACQRGDFQAA
VSLYGDALRADPQNCILYSNRSAALLKLGRYQASLDDAVKACLLNPKWPKAYFRQGVALQ
YLGRHADALAAFASGLAQDPKSLQLLVGMVEAAMKSPLRESLEPTYQQLQKMKLDKSPFV
VVSVIGQELLTAAHHTASVVVLESALKIGTCSLKLRGSVFSALSSAHWSLGNTEKSTGYM
QQDLEVSKTLGDQTGECRAHGNLGSAFFSKGNYREALTNHRHQLVLAMKLKDREAASMAL
SSLGHVYTAIGDYPNALASHKQCVLLAKQSKDQLSEARELGNMGAVYIAMGDFENAVQCH
EQHLGIAKALTSKREEARAYSNLGSAYHYHRNFDKAMSYHTHVLELAQELEEQPIEMRAY
AGLGHAARCMQDLERAKQYHQQQLAIAEGLKDRAAEGRASSNLGIIHQMKGDYETALKLH
KTHLSIAQELTDYAAQGRAYGNMGNAYNALGAFDQAVRYHRQELQISMEVNDRASQASTH
GNLAVAYQALGAHDRALQHYQNHLNIARELRDVQSEARALGNLGNFHCSRGEFPQAVPYY
EQYLRLSPDLQDMESEGKVCHNLGYAHYCLGSYLDAVKYYEQDLALAKDLHDKLSQAKAY
CNLGLAFKALGNFTKAEECQKYLLSLAQSLNNAQARFRALGNLGDIFVCKKDVTGAIQFY
EQQLALAHQMKERRMEACAYASLGATYRLVQKYDKSLGYHTQELEVYQELGDVPGECKAH
GHLAAVYMALGKYAMAFKSYEEQLELGRRLKDPGIEAQVYGNMGITKMNVGVMEEAIGYL
EQQLATLQQLSGNEAVLDRGRAYGNLGDCYEALGDFEEAIKYYDQYLSVAQSLNRMQDQE
KAYRGLGNGHRAMGNLQQSLVCFEKRLVVAHELGECGGKAQAYGELGALHSQLGNYEQAI
SCLERQLGIARDTQDRPLEGDASCGLGVVYQSMGEYETALRCHQSDLEIAEETGSPARQG
RAYGNLGLTYESLGNYERAVVFQEQHLSVAAQTNDLAAKTLAYGSLGRTHHALQNYSQAV
MYLQEGLRLAEQLARREDEAKIRHRLGLSLWASGNLEEAQHQLYRASALFETIRHEAQHS
TDYKLSLFDLQTSSYQALQRVLVSLGHHDEALAVAERGRTRAFADLLVERQTGQQDSDPY
TPVTVEHILDTVNSQRALVLYFSMAAGYLYSWLLAPGAGILKFHEVYLGEGVTEGGPDLH
EGGGGGVACGSSLEQHIASAREVLGVESYYSRGCSSSETESEAGDLLDQQFEELNNKLNS
VTDPTGFLRMVSRNNLFNRSCQSMTSLFSNTMSPAKDGCSSLPRRPSSLSKPPLRALYDL
LIAPMEGGLMHSSGPVGRHRQLVLVLEGELYLIPFALLKGSSSNEYLYERFSLIAVPSIR
GMGTISKSHSRRAGPASCGGVSMAAVVGNPRLPSSVMDRWLWGPMPSAEEEALMVSELLG
CQPLAGSSATKERVMSALTQAECAHFATHISWKLAALVLTPNPESVPGGAGTGGRGAGGG
RRGSGGRGRKGSFGSSYTIPESLHLQDDGSDAESICDSPPLQEFLLTAADILDLRLPVKL
VVLGSYQESSSKVTADGVVGLTRAFLAAGAQCVLVSLWPVPVSASKVFVHAFYTALLNGT
KASAALTDAMKTVQSSKQYSHPSNWAGYMLIGNDVKLNSPSSLIGQALAEILQYPERARD
ALRVLLHLVEKSLQRIQNGQRNSMYTSQQSVENKVGGVPGWHALLTAVGFRLDSAGTGIP
AAVFFPTADPGDRLQQCSTTLQSILGLPPPALQALCKLITASEAGEQLINRAVKNMVGML
HQVLVQLQTGEKEQDFSLLPIQVSISVQLWRLPGCHEFLAALGFDLCEVGQEEVVLKTGK
QANRRTMHFALQSLLALFDSTELPKRLSLDSSSSLESLASAQSVSNPLPLGYPNPPFSPP
CLDNLASDAISVYSLSSVASTMSFASKSECDFLGHRQRGGATAHFSAHKHPHVPRSRSSP
HGAAAAVGGGRGDDEEYEGFSIISSEPLGSHCDSLPLPLGHGQRHLHRGGRGVVAGSSSG
TGRGYQVSVSSRGSVSTPTSPVKTSLVPSSNSPFQKVPGKVSSSDTGESDQSSTETDSTV
KSQEEKTVPLDPQELAQKILEETQSHLRAVGSLQRAGVEGAAAGATARSSAFRSSETSAF
SRPSSSASVRAQSSPRPKPPSRSSSLQKISSGYNSPAASETSLKDSSHPSPTLDSHAQFK
LKYPSSPYSGHISRSPSNVSPSSGHQSPAGSAPSPALSYSSTGSACSSPADAPDLDRLRR
GVIDEKVVAIHNLKTFWANAAAQQQQQHLGPVRALRGAPGSLVSAKRDVLSLLNLSPRHC
SPSDAQDSLELRELGLHSLDRGSKNPSNGHNPRKMAPSPTISTSSSPGARSIRLPAGNGY
KFLSPGRFFPSSKC
NT seq
7425 nt
NT seq
+upstream
nt +downstream
nt
atggagaagcaagcaactgtaaaggaaaagttttcaatcttcggctctcggacagtgggc
agagctgcacagcgtgaagctgaagagaaagggggccgaagtggcctcaacaaggcagag
ttcatggagagagttcagcagagcaacgaagcctgccaacgcggtgacttccaggctgcc
gtgagtctctatggcgacgcccttcgagccgacccacagaactgcatcctctacagcaac
cgctcagcagcccttctcaaattgggacgctaccaggcttccctggacgacgctgtcaag
gcctgcctactcaaccccaagtggcccaaggcatacttccgacagggtgttgcccttcag
taccttggtcgccatgccgacgcgctggccgcctttgcctcggggctggcccaagacccc
aagagcctgcagctactggtgggcatggtggaggctgccatgaagtccccactacgagag
tcactggaacccacctaccagcagctgcagaagatgaaactggacaagagtccgttcgtg
gtggtgtcagtgattggtcaggagctgctgacagcagcccaccataccgcctccgtggtg
gtactggagtccgcattaaagatcggcacctgcagcctcaagctgcgcggctccgtcttc
tcagccctcagcagtgcccactggtccctgggcaataccgagaagagcaccggttacatg
cagcaagacctggaggtctccaaaacactaggtgaccaaacaggtgaatgtcgtgcccat
ggcaacctgggctcagcattcttctccaaggggaactaccgcgaggccctgactaaccat
cgccaccagctggtcctggccatgaagctcaaggacagggaggcagcttctatggccctg
agcagcctgggtcatgtgtacacagccatcggggactaccctaatgccctggccagccac
aagcagtgtgtcctactggccaagcagtccaaggaccagctgtcggaggcacgagagctg
ggcaacatgggcgccgtctacatcgccatgggcgactttgaaaacgctgtccaatgtcac
gagcagcacctgggcatcgccaaggccctgaccagcaagagggaggaggcccgtgcctac
agcaacctgggcagtgcctatcactaccaccgtaactttgacaaggccatgtcctaccac
acccatgtgctggagctggcccaggagctggaggagcagcctatagagatgagggcgtac
gctggactgggtcatgctgcacgctgcatgcaggacctggagagagccaagcagtaccac
caacagcagctggccatcgctgagggcctgaaggacagagctgcagagggaagagcctcc
tccaacctgggcattatccaccagatgaaaggagactatgaaactgcactgaaactgcac
aaaacccacctctccatcgcccaggagctcactgactatgctgctcagggccgggcctac
ggtaacatgggcaacgcctacaacgcattgggggcctttgaccaggccgtgcgctaccac
cgccaggagctacagatttccatggaggtcaatgaccgagcctcccaggcctccacccat
ggtaacctggccgtggcctaccaggctctgggggcccacgaccgcgccctgcagcactac
cagaaccacctcaatatcgcccgcgagctgcgagacgtccagagtgaggcccgcgccctc
ggcaacctggggaacttccactgctcccggggagagttcccccaagccgtgccctactac
gagcagtacctccgcttgtcccctgacctccaggacatggagagtgaggggaaagtctgc
cacaacctgggctacgcccactactgcctgggaagctacctggatgctgtcaagtactat
gagcaggacctggctctggctaaggacctgcatgacaagctgagccaggccaaggcctac
tgtaacctgggactggccttcaaggctctgggtaacttcaccaaggcagaggagtgtcag
aagtacctgctctctctagcccagtctcttaataatgcacaggcccgcttcagagccctg
ggcaacctgggggacatctttgtctgcaagaaggatgtgaccggagctatccagttctat
gagcagcagctagccctggctcaccagatgaaggagcgcaggatggaggcgtgtgcctac
gcttccctgggtgccacctacagactggtgcagaagtacgacaagtccttgggctaccac
acccaggaactggaggtgtaccaggagctaggcgatgttcccggggagtgtaaagcccac
ggccacctggcagctgtctacatggccctggggaagtatgccatggccttcaagagctac
gaggagcagctagagctgggccgcagactgaaggacccgggcatagaggcccaggtctac
ggcaacatgggcatcaccaagatgaacgtaggggtgatggaggaggctataggctacctg
gagcagcagttggccaccctgcagcagctgagtggcaacgaggccgtactggaccggggc
agggcctatggtaacctgggagactgttacgaagccttaggagactttgaggaggccatt
aaatactacgaccagtacctgtctgtggcccagagcctgaaccgcatgcaggaccaggag
aaggcttaccgaggtctgggcaatggacacagggcgatgggtaacctgcagcagtccctg
gtttgctttgagaagcggctggtggtggcccatgagttgggggagtgtggagggaaggcc
caggcctacggggagctgggggcgctccacagccagctggggaactatgaacaggccatt
tcctgtctggagcgccagctaggcattgcccgcgatacccaggaccgcccactagagggc
gacgccagctgtggcctgggtgtggtctaccagtccatgggggagtacgagacagccctg
cgctgccaccagagtgacttggagatcgcagaggagacgggcagtcccgcccgacagggc
cgcgcctatggcaacctgggcctcacctatgagtcactgggcaactatgagcgtgcggtg
gtgttccaggagcagcatctgagtgttgcagctcagaccaacgacctggcagccaagacc
ctggcctacggtagcctggggaggacacaccatgcactgcagaactactcacaggctgtc
atgtatctgcaggaaggcctacggctggcggagcagctggctcggcgtgaggatgaggct
aagatccgccatcgtctggggctgtctctgtgggccagtgggaacctggaggaggcccag
caccagctctaccgagcatctgcactgtttgagaccattcgtcacgaggcccagcacagc
accgactacaaattgtctctgtttgacctgcagacgtcctcctatcaggcactccagagg
gtcctcgtcagcctaggccaccatgacgaggcgttggcggtggcagagcggggtcggaca
cgagcatttgctgacctgctggtggagaggcagacaggccagcaggactcagacccctac
accccagtcacagtggagcacatcctggacacggtgaacagccagagggccctggtgctc
tacttctccatggctgctgggtacctgtacagctggctgctggctccaggagcaggcatc
ctgaagttccatgaggtgtacttgggagagggcgtgacagagggcgggccagacctccat
gagggtgggggagggggtgtggcctgcggctcatctttggagcagcacattgccagtgct
cgggaggtcctgggagtagagtcctactacagcaggggttgttccagcagtgagacagag
agtgaggcaggggacctgttggaccagcagtttgaggagctcaacaacaaactcaactct
gtgactgaccccacaggcttcctccgcatggtgtccagaaacaacctcttcaacaggagc
tgccagagtatgaccagcctgttcagtaacacaatgtccccagccaaagatggctgctcc
tctctgccccgccgaccaagcagcctcagcaaacctcctctccgtgccctctacgacctg
ctcatcgcacccatggaagggggcctgatgcattccagtggtcccgtgggcagacacaga
cagctggtgttggtgttggagggggagttgtacctcatccccttcgccctgctgaagggc
agctcctctaatgagtacctgtatgaacgcttcagcctcatcgctgtgccctccattcgg
ggcatggggaccatctccaagagtcattctcggcgggcggggccagcttcctgcgggggc
gtgtccatggcggcggtggtggggaaccctcgtctgccgtcgtctgtgatggaccgctgg
ctgtgggggcccatgccctctgccgaggaggaggccctcatggtgtctgagctgctgggc
tgccagcccctggctggatcctctgccaccaaggagagggtgatgagtgccctcacccag
gccgagtgtgcccacttcgctacccacatctcatggaagctggccgccttggtgctcaca
cccaacccagagagtgtacccggcggggcggggactggagggagaggggcagggggaggg
aggagaggcagcggaggcaggggcaggaagggctcgtttgggagcagctacaccatccca
gagagcctacacctgcaggatgatgggagcgacgcagagagtatctgtgacagccctccc
ctgcaggagttcctacttaccgctgctgatatactggacctgaggctgcctgtcaaactg
gtggtgctggggtcataccaggagtccagcagtaaggtgacagcagacggtgtggtaggt
ctgaccagggccttcctggctgctggggcccagtgtgtcctggtgtctctgtggcctgtt
cctgtgtcagcctccaaagtgtttgtccatgccttttacaccgctctgctcaacgggacc
aaggccagcgctgccctcacagacgccatgaagactgtccagagcagcaagcagtactcc
cacccctccaactgggcaggttacatgctgattggtaatgatgtcaagcttaacagcccc
tcgtccctgattggtcaggctctagcagagatcctacagtatccagagagagcacgggat
gctctgcgagtcttactgcacctggtggagaagtctctccagaggattcagaatggccag
cgtaactccatgtacacgtcccagcagagtgtggagaacaaggtggggggcgtcccaggc
tggcatgccctgctgaccgctgtgggcttccgcctggactcggctggcaccggcatccct
gctgctgtcttcttccccacagcagaccctggagacaggctgcagcagtgtagcaccacc
ctgcagtcaatacttggtctaccgcccccagctctccaagccctgtgtaaactcatcacc
gcctctgaggcaggcgagcagctcatcaaccgggctgttaaaaatatggtgggaatgctc
caccaggtgctggtccagctgcagacaggggagaaggagcaggacttctctctgctgccc
atccaggtgtccatcagtgtgcagctctggagactgccagggtgccatgaattcctggct
gcactagggttcgacctgtgtgaggtggggcaggaggaggtggtactgaagacggggaag
caagccaaccgccgcaccatgcactttgccctccagtctctactggcactatttgactcc
acagagctgccaaagcgtctcagcctggacagctcgtcctccctggagtccctggcctcg
gcccagtctgtctccaaccccctaccgctgggctaccccaacccacccttctccccaccc
tgcctggacaatctggcctcagatgccatctccgtctacagcctgagctccgtggcctcc
accatgagctttgcgtccaagtcagagtgtgacttcctgggccatcgacagcgtggtggg
gccacagcacacttctctgcccacaaacacccacacgttccccgcagtcgctcctctcct
cacggggcggctgcagcagtaggagggggccggggagatgacgaggagtatgaaggcttc
tccatcatcagcagtgagcctctgggaagccactgtgactccttgcctctacctctgggt
catggtcagcgccacctccaccgcgggggcaggggtgttgttgcggggtccagctcaggc
actgggcggggttaccaggtgtctgtgtcgtcacgaggcagtgtcagcacccccacctcc
cctgtcaagaccagcctggttcctagctccaactctcccttccagaaggtgccaggcaag
gtgagcagctcagacacaggtgagtcggaccagtccagcactgagacagacagcaccgtc
aaatcccaggaagagaagactgtccctctggatccccaagagctggcccagaagatcctg
gaggagacccaaagccacctgcgggcagtggggagtctacagcgggctggggttgagggg
gctgcagctggagccacagcccggagctctgccttccgctcctcagagaccagcgccttc
agccgtcccagtagcagcgccagtgtccgcgcccagtcctccccacgacccaaacctcca
tcccgctcttcctctctgcagaagatcagctctggttacaacagccctgcagcctcggag
acctccctaaaggatagcagtcacccctcccccaccctggacagccatgcccagttcaag
ctaaaataccctagctccccctatagtgggcacatctcccgctctcccagtaacgtgtcc
cccagctctggccaccagtccccagctggcagtgccccatctccagctctctcctactcc
tccacgggctctgcctgctccagccctgccgatgccccagacctggaccgcctcagacgg
ggagtaattgatgagaaggttgtggccatccacaacctgaagacattctgggccaatgca
gcagcccagcaacaacagcaacatctgggtccagtccgtgctctccgtggtgccccagga
tccctggtctctgccaagagagatgtgctgagccttctgaacctctccccacgacactgc
tcccccagcgacgcccaagacagcctggagctgcgggagctggggctgcactcgctggac
aggggcagcaaaaacccctccaacggacacaaccccagaaagatggccccctcgcccact
atttccactagcagcagccctggtgctcgctcaatcagactacctgctggcaatggatac
aagttcctctcccctggcaggtttttcccatcctccaaatgctga
DBGET
integrated database retrieval system
