Oncorhynchus tshawytscha (Chinook salmon): 112249548
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Entry
112249548 CDS
T05605
Name
(RefSeq) rho guanine nucleotide exchange factor 28 isoform X2
KO
K21072
A-kinase anchor protein 28
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112249548
Membrane trafficking [BR:
otw04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
112249548
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH_16
PH
C1_1
PHD
PHD_2
Motif
Other DBs
NCBI-GeneID:
112249548
NCBI-ProteinID:
XP_024275119
LinkDB
All DBs
Position
LG04:complement(48574110..48625223)
Genome browser
AA seq
1395 aa
AA seq
DB search
MRRAQALSSTLAAASRLSAMIHQPGKDQMHTNAMLVDQVDDLDMKYRSPVEEEVSSVPQR
NNPAWDSSFGSLPGSMAPHRDQAFPLPSSPLAYPFPFSGGGNRGRIQPSVSLSSGLSHRG
TSQPEKTCVLSSSLGPVECDSWEEDTLCQSPPSLPNFSSPWQRSDLHTSSGDERDSFDNL
LHFNRTHSNNSHTPSKDQSDPQLRLRSYSYSSPKTQLSRPLFTRDAAISDLTEEHRDFNL
TETPREKRIEDEEWDKYIIPSKVESEKYKVSRTFSFLKSRMSSPRNKIKVKDGKEKTGKE
KTGATNLHQFVPVSPSGPSGLSVYVACDKPVPGKEFLQCTNCSLSVHKGCRDSTAACGKR
PLEKNVAMLKSKSLPHMMREGSPASLTSSSSLLTMLPRGRKYMTAPLSKSPSESTDRSLK
DAVGVSVDSDVWNSCSLNEEGVQVTGTASSTDYHLTTQESVDTPLLSDLSADLVGFEVES
WSLAVTTEFCRKHDKHTVKRQDVIYELMQTELHHIQTLTVMSEVFRRGMLDELQLDWECV
ARIFPCLDPLLLFHRNLFGSLQERRYASAQPGHPHNYCIHSIGDILLQQFSEDNAVKMKQ
VYGEFCSHHTEAVKVFKELQQQNKKFQVFLKQQSNNSLVRRREVPEFILLVTQRITKYPV
LLERILHYTPEGSEEHTELSQALTQVRDIITAVDTSVSKYEKAQELQEVLSRVENKSLSK
LKSGEVFRKDDLLGKHQQRELQHKGLVYWKTATGRLKDTLALLLTDVLVFLQEKDQRLIF
AAVDQKPPVISLQKLIVREVANEERGMFLISASSVGPEMYEVHTFSKEERNAWMRHIRRA
VESCPEEEEERSVETEVRRNTELRVQKIYKLQDTLASQDQRICSGLEEKLQLYAELTELT
LHTPEPLPQHHLLVQPDPDAQMPPQTTALLTAALKEAEKLMSTLQASEAHTETSHSPPVR
VPEYCSYNSHCRIQESPAELDYPSSVSSASLVSDGEWAGPDTILWHSITELRRRDTNGAP
MKVAESVQSLTQLLYSLQAAVTIQDSWYEVQKLLLLELEHPLPHTPSCLHGNVAQEQEKQ
RSTEKKKEEVERMSVERRREEVEGIQKLQGRLRQDQQRWERECLARERQQGEKVSLLKQR
ERQCHLEAESLRREREELEQQLLEYQQNLERLREGQRSMERDRDRVEAEHRLLQSWRHNR
QSSLPIMISLDLEQVSNHSRSVSLDGNEAALLHALQQNRLHRNQHQHQSLHSGLRKSQDS
PLHSPNLSLRPSLYNSLNTLLSQAHSKPSTELLTHQHYAHPQHSHLQSGSSPNNPFRRRF
TTGHQGPNNNNFSPPQDRLTLGLLGSLGSGVTGLGLDEENFPTKESLTPLLTPQAYFPLN
GKNSEDGGEENIVYL
NT seq
4188 nt
NT seq
+upstream
nt +downstream
nt
atgaggagggcccaggctctgtcctctactctggctgctgcctccagactctcagccatg
atccaccaaccagggaaggaccagatgcacactaatgccatgctggtggaccaggtggat
gacctggatatgaagtaccgttctccagtggaggaggaggtgagctctgtgccacagagg
aacaaccctgcctgggactcctcctttggaagtctccctggctccatggctcctcacagg
gaccaggccttcccccttccttcctctcccttggcctacccctttcctttctctggtggt
ggaaatagggggaggatccagccgtccgtctccctctcctctgggctcagtcacagagga
accagtcagcctgagaagacctgtgtactgagttccagtctgggaccagtagagtgtgac
agttgggaggaggacaccctgtgccagtctcccccctccctccccaacttctcatctccc
tggcaacgctccgacctgcatactagctctggggacgagagggactcctttgacaacttg
ttgcacttcaaccgtacacactctaacaattcacacacaccttccaaggatcagtcagac
ccacagcttcgtctgcgctcttactcctattcctcccccaagacccagctttcacgcccc
ctgttcacccgagatgcagcgatctctgacctgacagaagagcatagagacttcaacttg
actgagacacccagagagaagagaattgaggacgaggagtgggataaatacataattccc
tccaaagttgagtcagagaaatacaaagtcagcagaaccttcagcttcctgaagagcagg
atgtccagcccacgtaacaagatcaaggtgaaggatggaaaagagaagactggaaaggag
aagacaggagcaactaacctacaccagtttgtgccagtctctccctcaggaccctctggg
ctgtctgtatatgtggcctgtgacaagcctgtccctgggaaagagtttctgcagtgtacc
aactgctctctgagtgtccataagggctgtcgtgactcgactgcagcatgtgggaagagg
cctctggagaagaatgtggcgatgttaaagtccaaatctctcccacacatgatgagggag
ggttcccctgcctccctcacctcttcctcctccctcctcaccatgctgccccgaggcaga
aaatatatgactgctcccctatctaagagcccctctgagtctacagacaggagcttgaag
gatgctgtgggggtcagtgtggacagtgacgtgtggaacagctgctcccttaatgaagag
ggggtacaggtcacagggaccgcatcatccacagactaccatctcaccacacaggagtcg
gtcgacacccccctgctcagcgacctatcggctgacctggtggggtttgaggtggagtcc
tggagtctggccgtcacaactgagttctgcagaaaacacgacaaacacaccgtcaaacgt
caggatgtcatctacgagctgatgcagacagagttgcaccacatccagacactgacggtg
atgtccgaggtgtttcgtcgagggatgctggatgagctccaactggactgggagtgtgtg
gctcgcatctttccctgtctggatcctctcctgctcttccacaggaatctctttggatct
ctacaggagcggcgatacgcttcagcccagcccggacacccacacaactactgcatccac
agtataggggatatactgttgcaacagttctcagaagacaacgctgtgaagatgaagcaa
gtgtacggagagttttgtagtcaccacacggaggctgtcaaagtcttcaaagagctgcag
cagcagaacaagaagttccaggtgtttctcaaacaacagagtaacaactctctggtcaga
agaagggaggtgccagagttcatcctgttagtgactcagcgcatcaccaagtaccctgta
ctactggagaggatactgcactatacacccgagggcagtgaggagcacactgagctgtcg
caggcactcactcaggtgcgtgacatcatcactgcagtggacacgagtgtgagcaagtac
gagaaagcccaggagctgcaggaggtgttgagccgcgtggagaacaagagcctttccaag
ctgaagagcggcgaggtgttccgcaaggacgacctgctaggaaaacaccaacagagggag
ctgcagcacaagggacttgtctactggaaaaccgctacaggacgactgaaagacaccctg
gctctgctgctgactgatgtcctggtgttcctgcaggagaaggaccagagactcatattt
gctgccgtggaccagaagcccccagtcatctccctgcagaagctaattgtgagagaggta
gccaatgaggagagagggatgttcctaatctctgcctcctcagtggggcctgagatgtac
gaggttcacaccttctcgaaagaagagaggaacgcctggatgagacacatacgacgggcc
gtagagagttgtcctgaggaggaggaagagagaagtgttgagactgaggtcagacggaac
actgagctgagagttcagaagatctacaaactccaagacaccctggcaagtcaggaccag
cgtatctgcagtggtctggaggagaagctacagctgtatgccgagctgacagagttaacc
cttcatacaccagagcccctgccacagcaccacctactggtccaaccagaccctgatgct
caaatgccaccgcagaccactgcactactcacagctgcactcaaagaggcggagaagctg
atgtctaccttgcaggccagtgaggcccacactgagaccagccacagcccccctgtcaga
gtcccagagtactgcagctacaacagccattgcaggatccaggagtcacctgctgagttg
gactatccgagcagtgtgagctcggcctctctggtgtcggatggcgagtgggcagggcca
gacaccatcttgtggcactctataaccgagctgaggagaagagacaccaatggagcacca
atgaaggtggcagagagtgtccagagcctgacccagctgctctacagtctgcaggcagct
gtgaccatccaggacagctggtatgaggttcaaaagctcctcctactggagctagagcac
ccgctcccacacaccccctcctgtctccatggcaatgtggcccaggagcaggagaaacag
cggagtactgagaagaaaaaggaggaggtagagaggatgagtgtggaaaggaggagagag
gaggtggaggggattcagaagctacaggggaggctgagacaggaccagcagcgctgggag
agagagtgcctggccagggagagacaacagggggagaaggtgagtctgttgaagcagcgc
gagcgacagtgccacctggaggctgagagcctgcgccgcgagcgggaagagctggagcag
cagctgttggagtaccagcagaacctagagaggctgagggagggtcagaggagcatggag
agggacagggacagggtggaagccgagcacaggttgctccagagctggagacacaaccgc
cagagctccctgcctattatgatatcgctggacctggaacaggtgtccaaccacagtcgg
tcagtcagcctggacggcaacgaggctgctcttcttcatgccctccaacagaatcgtctc
caccgcaaccagcaccagcaccagagcctccactctggcctgagaaagagccaggacagc
cccctccatagtcccaacctgagcctcaggcccagcctctataacagcctcaacactctg
ctcagccaggcccacagtaaaccatccacagaattactgacacaccaacactatgctcac
ccccagcacagtcacctccagtcaggaagctccccaaacaacccctttaggaggaggttc
accacaggacatcaggggcccaacaacaacaatttcagccctccacaggacaggctgacc
ctggggttgttgggttcattggggtcaggggtcacaggcctgggtctggacgaggagaac
ttccccaccaaggaatccctcactcctctcctcaccccacaggcctacttccctttgaat
ggaaagaacagtgaggatgggggagaggagaacattgtgtacctctga
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