Oncorhynchus tshawytscha (Chinook salmon): 112249598
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Entry
112249598 CDS
T05605
Name
(RefSeq) 12S rRNA N4-methylcytidine methyltransferase-like
KO
K25876
12S rRNA N4-methylcytidine (m4C) methyltransferase [EC:2.1.1.-]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
otw03029
]
112249598
Mitochondrial biogenesis [BR:
otw03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
112249598
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Gene cluster
GFIT
Motif
Pfam:
Methyltransf_5
Methyltransf_25
Motif
Other DBs
NCBI-GeneID:
112249598
NCBI-ProteinID:
XP_042176125
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Position
LG04:complement(68776510..68800699)
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AA seq
402 aa
AA seq
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MDPGVPKASSSGCHTLAGSRGFFPRLGQKAPIPRQASAGPPGFYAQPACQAATPPPDHQA
PTRDRQAFMPQPACQALTPLPVHLGFTSSRLVQRPFGGGGHTKAILRASPEVTVVVLDRD
PTAFSLAQQLAKEHSGRVHPLLGRFSELGALLSRLRLQPGSVDAVLLDAGSCLRSAGSSL
CVGTPTCPAPLTLLFFVRRYPDMPCAADVVNALDQQALASILTAYGEERHTRKIASAMVE
ARSVYPITRTQQLASMVAGSFAASALYAHKDRLQRPSHVATKTFQVLRMFVNDELNDLHA
GLCTAQTVLKPGGRLCVLTFHSLEDRLVKRFLHGEDVGAPPRRSVRQRVQRWEEEEEEEE
KGGEKDSGHWVDLQRGVLMPQAEDVLENPWGFSAKLRAAFKQ
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggatccgggggtgcctaaagccagctcatcaggctgtcacaccctagctggctcgaga
ggtttctttccccggttgggtcagaaggcgcccatcccacgtcaggcctcagccggaccg
ccaggattttatgcccagccagcttgtcaggctgctacgcctccaccggatcatcaggct
cccacgcgggatcgacaggccttcatgcctcagccggcttgccaggctctcacgcctctg
ccggttcatctgggtttcacgtccagtcggcttgttcagcgcccctttggaggtggaggt
cacaccaaagccatcctgagggcctctcctgaagtgacagtagtggtcctagaccgagac
cccacagcattcagcttagctcaacagctggccaaggaacacagtggccgggtgcacccg
ttgctcgggcgtttcagtgagctgggagccctgctgtctagactgaggttgcaaccaggt
agtgtggatgctgttcttctggatgctggctcctgccttagatcagcaggctcttctttg
tgcgtaggtaccccgacatgccctgcgccgctgacgttgctcttctttgtgcgtaggtac
cccgacatgccctgcgccgctgacgttgtgaacgccttagatcaacaggctcttgcgtcc
atcctcactgcctatggggaggaaaggcacaccaggaaaatagcctcggccatggtggag
gcacgcagtgtctaccccatcacccggacacagcagctggccagcatggtggcaggatct
tttgcagccagcgctctctatgcccacaaagatcggcttcagcgaccctcacacgttgcc
accaagacgtttcaggtgctgcgtatgtttgtcaatgatgagctgaatgacctgcatgct
ggactctgcactgctcagacagtgcttaaacctggcggccgcctctgtgtgctgaccttc
cattcactagaggaccgcttggtaaagcgttttctccatggagaggatgtaggtgcccca
ccccgtcggagtgtccgtcagagagttcagcgatgggaggaagaggaggaggaagaagag
aagggtggggaaaaggacagtggtcactgggttgacctgcagagaggggtgctgatgcca
caggcagaagacgtactggagaacccatggggattctcagccaaactcagggcagcattc
aaacaataa
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