Oncorhynchus tshawytscha (Chinook salmon): 112249608
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Entry
112249608 CDS
T05605
Name
(RefSeq) Wilms tumor protein 1-interacting protein homolog
KO
K16682
LIM domain-containing protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112249608
03036 Chromosome and associated proteins [BR:
otw03036
]
112249608
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
112249608
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Sister chromatid separation proteins
Aurora kinases
Regulators of Aurora kinases
112249608
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
112249608
NCBI-ProteinID:
XP_042177130
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All DBs
Position
LG04:complement(72175023..72214992)
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AA seq
731 aa
AA seq
DB search
MDHYEEDLGLRASKLMEDLSLYEAYKDGMYSSRRDMVINPDLDFSSPTIPEQKSKTMNGS
SAPHQQIHSVENYMSGNKVYTAAPVRPVNGNRAVPVDYCTPQRDIVYPNEDSYCTKSEIA
LPCYSGASERHRRYSLEVLGHRYSTGSAYDGVVLNKPVPSPGNRCNSICITTNHDGRYNA
TSPRSSFVSSLSSQEQSKHASPRSSISSPRTSLLVPGQDKYTSPRSSLVHCEGSSALSPR
SSYASTASDTSKHSSPRASLNSYDCCSKPSSNRTSGISMGYDQRHISPRSSTASQYSCTT
SPRSSYSDSRYMPVGNHDLEGAVLHGMPVASPRSSICSQEGCARPGTIANCVVSPRSSIS
SHSSRSSRSSRGSMSTYPDLQLPSPRSSMLGTGLQEDILTQDCGDTNGVHSRIHLQALSG
MPEALPQHAPQQSTQAGMNTEVTAGSPSSSYGLHMKTPASGQRFKLPYQVTPCRESGPSQ
AERSLEALTLELEKELEMHMKKEYFGICIKCGKGVYGASQACQAMGNLYHTNCFTCYSCG
RRLRGKAFYNVNGKVYCEEDFLYSGFQQTAEKCFVCGHLIMEMILQALGKSYHPGCFRCV
VCTEGLDGVPFTVDVENNIYCVKDYHTVFAPKCASCNQPILPAQGSEETIRVVSMDKDYH
VECYHCEDCGLQLNDEEGHRCYPLDCHLLCHGCHIRRLKVAVPAHPPPATHYTSLSCERN
QPQPTADPPPR
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggatcactatgaggaagatttgggactccgggcgagtaaattaatggaggacctttcc
ttatatgaagcatacaaggatggaatgtacagttcaaggagagacatggttatcaacccc
gatttggatttttcgtctccaacaatacccgagcagaaaagtaagacaatgaatggcagc
tctgcgcctcaccaacagatacacagcgttgagaattacatgtctgggaataaagtgtac
actgcggctccggtgcgccccgtgaatggcaacagagccgttcctgtggattattgcacc
cctcaaagagacatagtttatcctaatgaagatagctattgcaccaaatccgaaattgct
ttgccgtgttatagcggcgcgtccgagcgacacaggaggtactccttggaggtgctgggg
cataggtacagcactggtagcgcgtacgatggagtggttttgaacaagccagtaccctca
cctggcaacagatgcaacagtatttgtattaccaccaaccacgacggcagatacaatgca
accagcccgcggtccagtttcgtatcctccctctcctcccaggagcaaagcaaacatgca
agcccgaggtcgagcatcagtagcccgcgcacgagtctgttggtacccgggcaagacaag
tacactagtcccaggtccagtctggtacactgtgaagggagcagtgccctcagcccccgg
tctagctatgcaagtacagccagcgacacaagtaaacattccagtccaagggccagtctg
aacagctatgactgctgcagtaagcccagcagtaaccgcaccagcggcatcagtatgggc
tacgaccaaaggcacatcagccccaggtccagcacagcgagccagtattcttgtaccacc
agtccacgctctagctattcagattcacgttacatgcctgtggggaaccatgatctggag
ggtgcagttttgcatggcatgccggtggccagtccccggtcaagcatctgcagccaggaa
gggtgtgcaagacccgggacaatagctaactgcgttgttagtccccgatccagtatctcc
agtcacagttccagaagttcccggagctccaggggatctatgagcacctacccagatctc
caactgccttcacccaggtcctcaatgctggggactggtttgcaggaggacatactaaca
caagattgtggcgataccaacggtgttcatagtcgtatccatctccaagcgctctctggg
atgccagaggccctgccacagcatgcaccacaacagtcaacccaggcagggatgaacaca
gaggtgaccgctggatcaccatcatcttcttatgggctccatatgaaaactccagcctca
gggcagaggtttaaactaccttaccaggtgaccccatgccgggaaagtggcccaagccaa
gcagaaaggagtctggaagcactcaccttggagctggagaaggagttagaaatgcacatg
aaaaaagaatactttggtatctgtatcaagtgtggaaagggtgtgtatggagccagccaa
gcctgtcaggccatggggaatctgtaccataccaactgcttcacctgttactcctgtggg
aggaggctgagagggaaagctttctacaacgtcaacggcaaggtctactgtgaagaggac
ttcctgtactctggctttcagcagacggcagagaagtgctttgtatgtggtcacctcatc
atggaaatgatcctgcaggcattaggcaagtcctaccaccctggctgcttccgctgtgtg
gtctgcacagagggtctggacggagtgcctttcactgtggacgtggagaacaacatctac
tgtgttaaagactaccacacggtttttgcccctaaatgtgcctcatgcaaccagccaatc
ctccctgctcagggctctgaggagaccatccgggtggtgtccatggacaaggactaccat
gtggagtgctatcactgtgaggactgtggcctccagctaaatgacgaggagggtcaccgc
tgttaccccctggattgccacctgctctgtcacggctgccacatccgcaggctaaaggtc
gcagtgcccgcccacccgcccccagctacccactacacgtcactgagctgtgagaggaac
caaccccaacccaccgctgacccgcctcccaggtga
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