Oncorhynchus tshawytscha (Chinook salmon): 112249690
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Entry
112249690 CDS
T05605
Name
(RefSeq) nodal homolog
KO
K04666
nodal
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04060
Cytokine-cytokine receptor interaction
otw04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
112249690
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
112249690
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
otw04052
]
112249690
Cytokines and neuropeptides [BR:
otw04052
]
Cytokines
Transforming growth factors (RSTK binding)
112249690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Motif
Other DBs
NCBI-GeneID:
112249690
NCBI-ProteinID:
XP_024275238
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All DBs
Position
LG04:complement(30946010..30947578)
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AA seq
311 aa
AA seq
DB search
MSSISASDDVQLSELRIRLPAFSVSKHVTLDIYHSRKQDCESDTELCSEERLLLGSFGAS
PSDTRSQWNVFNVTALLKYWMHQGDTVTQSQEARVLVIEKEHESGAPDDGEEIDMAYIGH
FTHKKIKVHHPTDERVMMVVFSKHNLPRDGESAPTLIRTVEHSKYAILDQVSREAQGRRH
KRNRMERVRMAGGIAANATGSAAEAVQRPLCRKIDMWVDFDHIGWNEWIVYPKRYNAFRC
EGECPTPVDESFSPTNHAYMQSLLRLYHPDRVGCPSCVPTRLSPLSMLYYGDEDVVLRHH
EDMIVEECGCH
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccatctctgcgagtgacgacgtccagctgtcagagcttcggatcagactacca
gcgttctccgtttccaaacacgtcacattggacatttatcactcacgaaagcaggactgc
gagtctgacactgaactgtgcagcgaggagcgccttctcttgggcagctttggcgcatcg
cccagtgacaccaggtctcaatggaacgtgttcaatgtgacagctctgctcaaatattgg
atgcaccagggagacacagtgacgcaaagccaagaagcaagagtccttgtgatagagaaa
gaacacgagagtggggcaccggacgacggagaggaaattgacatggcctacatcgggcat
tttacgcacaagaaaatcaaggttcaccatccgacagacgaacgggttatgatggttgtc
ttctccaagcacaacctgccccgagatggcgagagcgcacccactctcatccgtactgtg
gagcactccaaatacgcaattttggaccaagtcagccgtgaagctcaagggcgacgccac
aagagaaaccgaatggagagagtgcggatggccggcggaattgcagctaatgctactggg
tccgcggctgaagccgtccaacgcccactctgtcggaagattgacatgtgggtagatttc
gaccacatcggctggaacgagtggattgtgtatccaaaacgctacaacgccttccgctgc
gagggcgagtgccctactccggtggatgaatccttcagtcccaccaaccacgcatacatg
caaagcctgttgagactgtaccatccggatcgcgtgggttgtccgtcctgcgtgcccacg
cgcctcagcccgctgtccatgctgtactacggggacgaagacgtggtgttgcggcatcac
gaggacatgatcgtggaggagtgtggctgtcactga
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