Oncorhynchus tshawytscha (Chinook salmon): 112249936
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Entry
112249936 CDS
T05605
Symbol
matn3a
Name
(RefSeq) matrilin-3a isoform X1
KO
K19467
matrilin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112249936 (matn3a)
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
Von Willebrand domain-containing proteins
VWA domain-containing proteins
112249936 (matn3a)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
VWA
Matrilin_ccoil
VWA_2
FXa_inhibition
cEGF
EGF_LRP2
EGF_CA
Plasmod_Pvs28
hEGF
Motif
Other DBs
NCBI-GeneID:
112249936
NCBI-ProteinID:
XP_024275446
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All DBs
Position
LG05:12723836..12732817
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AA seq
549 aa
AA seq
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MKSLFGSLVYCLFLFVSDVYGTYRLNRFDPQQVTAQSYAQRRNIARPPLRTLAPSVHASA
YRHRGNHYHHQPPGIHLPVVYQQPGPLYPPVAYPRSSVPLPPYQHRAPPVVYNLYQDLSP
PVVHHHPFKVFFPPVSHHHKFKGKCSHILPLVQPKPTTVPTTPVVYLPTTVPTLPSVTTL
QPVMTTLPLEVTTTPVPPTLPVSTQSGIVITTASVETATDNSCRSRPLDLVFIIDSSRSV
RPGEFEKVKIFLADMVDTLDVGPEATRVAVVNYASTVKIEFLLKAHLNKPNMKQAITRIE
PLAAGTMTGLAIKSAMTEAFTEESGARPKSKNIAKVAIIVTDGRPQDQVEEVSAAARGSG
IEIYAVGVDRADMTSLRLMASNPLEDHVFYVETYGVIEKLTSKFRETLCGWDPCDMGHDC
EDMCVSSSSNNSYHCECREGYLLNTDKKTCSQSQTRVDPCAMGHDCEHICVSSNASHHCK
CRKGYILNLDQKTCTLKQIKAVVVVEDPCKCEARLAFQMQTQAALQEITARLADMTGRVE
QIENILGPI
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctttattcgggagtctcgtctactgccttttcctctttgtgtctgatgtatac
ggaacgtaccgtttgaatagattcgatccacagcaggttactgctcaaagttatgcacaa
cgtagaaatattgcccggccaccgctgcggacgctcgctccttcagttcacgccagtgca
tacaggcatagaggcaatcactaccaccaccagccaccagggatccacctgcccgtggtt
taccaacaacctggccctctatatccacccgtggcttaccccagatcctctgtcccctta
ccaccttaccaacacagagcgccaccggtggtgtacaacctataccaagacctttcacct
ccagtagttcaccaccacccgtttaaagttttttttccaccagtgagccaccaccacaaa
ttcaaaggtaaatgttcacacattttacctctggtacagcctaaacctactacagtgcca
acgacccctgtggtgtacctacccaccacagttccaactctaccatcagtgactacattg
caaccggtgatgaccaccttgccactggaggtgaccaccacccccgtgccgccaacacta
cctgtcagtacccaaagcggcatcgtcatcaccaccgccagtgtggagacagcgacagac
aattcgtgcaggagccgtcccctggacctggtcttcatcatcgacagctcccgcagcgtg
cgccccggcgagtttgagaaggtcaagatcttcctggccgacatggtcgacaccttggat
gtgggaccagaagccacccgtgtggccgtggtaaactatgccagcacggtcaagatcgag
ttcctgctcaaggctcacctgaacaagcccaacatgaagcaggctatcacccgcatcgag
cccctcgccgccggcaccatgactggcctggccatcaagtcggccatgaccgaggccttc
accgaagagtcaggcgcccggccaaagtcaaagaacatcgccaaggtggccatcatcgtg
acagacgggcgtcctcaggaccaggtggaggaggtgtcagcggctgcccgggggtccggc
atcgagatctacgcggtgggggtggaccgagccgacatgacctctttgcggctgatggcc
agcaaccccctggaagaccacgtgttctacgtggagacctacggcgtcatcgagaagctc
acctccaaattcagggagaccctgtgtggttgggacccctgtgacatgggacacgactgt
gaggacatgtgtgttagcagcagcagcaacaactcctatcactgcgagtgtcgggaaggg
tatctcttgaacacggacaagaaaacatgttcccagagtcagacacgtgtggacccctgt
gccatgggacacgactgtgagcacatatgtgtcagcagcaacgcgtcccatcactgcaag
tgtcggaagggctatatcttgaacctggaccagaaaacgtgtactctgaaacagattaag
gcggtggtggtggtggaggacccttgtaagtgtgaagccagactggctttccagatgcag
acacaggccgccctccaggagatcactgccagactagctgacatgacaggaagggtggaa
cagattgagaacattttgggacctatctaa
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