Oncorhynchus tshawytscha (Chinook salmon): 112250017
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Entry
112250017 CDS
T05605
Name
(RefSeq) unconventional myosin-VI isoform X1
KO
K10358
myosin VI
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04814
Motor proteins
otw05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
112250017
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112250017
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112250017
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112250017
04147 Exosome [BR:
otw04147
]
112250017
Membrane trafficking [BR:
otw04131
]
Others
Actin-binding proteins
Myosins
112250017
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
112250017
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
112250017
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
MYO6_lever
Myosin-VI_CBD
Myosin_N
IQ
Fusion_gly
Motif
Other DBs
NCBI-GeneID:
112250017
NCBI-ProteinID:
XP_042177481
LinkDB
All DBs
Position
LG05:16381942..16514212
Genome browser
AA seq
1305 aa
AA seq
DB search
MEDGKPVWAPHPGDGFQLGTIVDIGADSLTIEPLKQGQKSFTAQINQVFPAEDDVNKHVE
DNCSLMYLNEATLLNNVRVRYSKDRIYTFVANILIAVNPYYDIPKLYAPETIKQYHGRSL
GTLPPHVYAIADKAYRDMRVLKMSQSIIVSGESGAGKTENTKFVLRYLTTSYGTGQDIDE
RIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKNTVVGGFVSHYLLEKSRICQQSQ
EERNYHIFYRLCAGASEDIRTKFHLESPDTFRYLNRGCTRFFANKDTDKQILQNRKSPEH
LKAGPLKDPLLDDQGDFNRMCGAMKKIGLDDMEKLDLFRVVAGVLHLGNIDFEEAGSTSG
GCTIKNQSSQTVEYCAELLGLGEQDLSVSLTSRVMLTTAGGAKGTVIKVPLKVEQANNAR
DALAKAVYSRLFDHVVTRVNQCFPFHSSANFIGVLDIAGFEYFEHNSFEQFCINYCNEKL
QQFFNERILKEEQELYQKEGLGVNEVRYVDNQDCIDLVEAKLVGILDILDEENRLPQPSD
QHFAETVHNKHKNHFRLTVPRKSKLQVHRNVRDDEGFIIRHFAGAVCYETTKFVEKNNDA
LHMSLECLVSESKDRFIRELFENSNNTKDSKQKAGKLSFISVGNKFKTQLNILLEKLRST
GSSFIRCIKPNLKMVSHQFEGAQILSQLQCSGMVSVLDLMQGGFPSRAPFHELYNMYKQY
MPAKLTRLDPRLFCKALFKALGLNENDYKFGLTRVFFRPGKFKEFDQIMKSDPDHLAELV
KKVNQWLICSRWKKVQWCSLSVIKLRNKMLYRASACIKMQKTVRMWLCRRKHKPRIDGLV
KVRNLKNRMDKFNEVIAGLKEGKQEMSMQIQGLEDAINTSMLKIKTTAMTRIDMDHEYQA
LVTRSEELLTAMQNKKKEEEEKERLKKIQEEMAREKKRREEEEQRRKQDKEDRRLKAEME
QKRKHEEEERKQREKEERKLQAEMDVQLEAEREEAAARQNILEQERRDRELAMRIAQSEA
ELIPEDTQNDAGLRSNGTSGGPSSPERATEAGGSQKLKSMSMEEMAKEMSELLSRGPQVQ
ATKAAAAGTKKYELSKWKYAELRDAINTSCDIELLAACREEFHRRLKVYHAWKSKNKKRG
NNPGVTEQRAPKSVTDYDLAPRVRQAPQANSAPPIPARQHEVAMNRQQRYFRIPFIRPGD
QYKDPQNKKKGWWYAHFDGPWIARQMELHPDKQPILLVAGKDDMEMCELSLEETGLTRKR
GAEILPRQFEEIWERCGGIQYLRRAIEKQQARPTYATAMLKTLLK
NT seq
3918 nt
NT seq
+upstream
nt +downstream
nt
atggaggatgggaagccggtgtgggcgccccacccaggagatgggttccagctggggacc
atagtggacataggagcagacagtttgaccatcgagccgctgaaacaggggcaaaagagc
tttacggcccagatcaaccaagtgtttccggctgaggatgatgtcaacaaacatgtggaa
gacaactgttctttaatgtacttgaatgaagccacactcttgaacaacgtccgtgtgcgg
tatagtaaagacagaatttatacgtttgtagctaatatcctgatagcagtgaacccctac
tatgacatcccaaagctctatgctcccgagaccattaaacagtaccatgggaggtccctg
ggcacccttccgccccacgtctacgctattgctgacaaggcctacagggacatgagggtg
ctgaagatgagccagtccatcatcgtgtccggggagtctggtgccgggaagactgagaac
accaagtttgtcctccgatacttgacaacatcctatggaacaggtcaagatattgatgag
agaatagttgaagccaatcccctgctagaagcttttggaaacgctaaaactgtcaggaat
aacaacagtagtcgctttgggaagtttgtagagatccacttcaacgaaaagaatactgtg
gtgggaggcttcgtgtcccactacctgctggagaaatccaggatctgccagcagagccag
gaggagaggaactaccacatcttctaccggctgtgtgctggagcctccgaggacatcagg
accaagttccacctggaatcaccagacaccttcaggtatttgaacagaggatgcactcgc
ttctttgcaaacaaggacacggacaaacagatccttcagaaccgcaagagtccagagcac
ctgaaggctgggcccctgaaggaccctctgctggacgaccagggggacttcaacaggatg
tgcggggccatgaagaagatcggcctggatgatatggagaagctggacctgttcagggtg
gtggccggggtgctgcacttgggcaacatcgactttgaggaggcaggcagcacatcaggt
ggctgcactataaaaaaccagtcaagccagacggtggagtactgtgctgagctgctgggt
ctgggagagcaggacctgagtgtcagcctcacgtccagggtcatgctcaccacagcaggg
ggcgccaaaggaacagttatcaaagtgccactgaaagtggagcaggcaaacaacgcacgg
gacgccctggccaaggctgtgtacagccggctgtttgaccacgtggtcaccagggtcaac
cagtgcttccccttccactcttctgccaacttcatcggggttctggatatcgcaggcttc
gagtactttgagcacaacagctttgagcagttctgcatcaactactgtaatgagaagctg
cagcagttcttcaacgagcgcattctgaaagaggaacaagagctgtatcagaaggagggc
cttggagtgaacgaggtccggtatgtcgacaatcaggactgtatagacctcgtggaggcc
aagctggtgggcatcctggacatcctggatgaagagaaccgtctacctcagcccagtgac
cagcactttgcagagaccgtacacaacaaacacaagaaccactttcgactgaccgtgccc
cggaaatcaaagctgcaagttcacaggaatgtgagggatgacgagggattcatcatcaga
cactttgcaggagctgtgtgctatgagacgaccaagtttgtggagaagaacaatgatgca
ctgcacatgtccctggagtgcctagtgagtgagtctaaggaccggtttatccgggagctc
tttgagaactccaacaacaccaaggactcgaaacagaaggccggcaagctcagcttcatc
agcgtaggcaacaaattcaagacccagctgaacattctactggagaagcttcgcagcacg
ggctccagtttcatccgttgtatcaagcccaatctgaagatggtcagccaccagtttgaa
ggggcccagatcctctctcagttgcagtgctcaggtatggtgtccgttctggacctgatg
cagggaggcttcccctccagagcgccattccatgagctctacaacatgtacaagcagtac
atgcctgccaagctgactcgcctggacccaagactcttctgcaaggctttattcaaagcg
ctgggactcaacgagaatgattacaagtttgggctgaccagagtgttcttcagacctggg
aagtttaaggagtttgatcagatcatgaagtcggacccagaccacctggcggagctggtg
aagaaggtcaaccagtggctcatctgcagccgctggaagaaggtccagtggtgttccctc
tctgtcatcaaactgaggaataagatgctctaccgtgccagtgcctgcatcaagatgcag
aagacggtgcgcatgtggctgtgcaggaggaagcacaagccgcggatcgatgggctggtg
aaggtgcgtaacctgaagaacaggatggataagttcaacgaggtgatcgccggcctgaag
gaggggaagcaggagatgagcatgcagattcaggggctggaagatgccatcaacacatcc
atgctcaaaatcaagaccacagcaatgacccgcattgacatggaccatgagtaccaggcc
ctggtcaccaggtcagaggagctgctgacggccatgcagaacaagaagaaggaggaggag
gagaaggagcgactgaagaagatccaggaggagatggcgagagagaagaagaggagggag
gaggaggagcagcgccgcaagcaggacaaagaggacaggcgtctgaaagcggagatggag
cagaagcggaaacacgaagaagaggagcggaagcagagggagaaagaggagaggaagctt
caggcagagatggatgttcagctggaggctgagcgggaggaggcggcggcgcgtcagaac
atcctggagcaggagaggcgcgacagggagctggccatgaggatcgcccagagcgaggct
gaactcatcccagaggacacccagaatgacgcaggcctgcgcagtaacggcacctcaggt
ggtccatcctccccagagagagctactgaagctggtggatctcaaaaactcaagagcatg
tccatggaggaaatggccaaggaaatgtctgagcttctgtctagaggcccacaggttcag
gctaccaaagctgctgctgctggcaccaagaagtacgagctcagcaagtggaaatacgcc
gagctgagggacgccatcaacacatcctgtgacattgagttgctggctgcctgccgagaa
gagttccaccgccggctgaaggtctaccacgcctggaagtcaaagaacaagaagcgtggc
aacaaccccggcgtcacagagcagagggcccccaaatcagtcactgactatgatctcgca
cctcgtgtgagacaagcaccccaggcgaactcagccccgcccatcccagccaggcaacat
gaggtggccatgaacaggcagcagcgctacttccgcatccccttcatccggcccggggac
cagtacaaggacccacagaacaaaaagaagggttggtggtacgcccactttgatgggccc
tggatcgcaaggcagatggagctgcacccggacaagcagcccatcctgctggtggcaggg
aaagacgacatggagatgtgtgagctgagcctggaggagacaggcttgacaaggaagagg
ggagctgagatcctgccccggcagtttgaggagatctgggagcgctgcgggggcatccag
tacctccggagagccatcgagaaacaacaggcccgccccacctacgccacagccatgctg
aagaccctcctcaagtaa
DBGET
integrated database retrieval system
