Oncorhynchus tshawytscha (Chinook salmon): 112250025
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Entry
112250025 CDS
T05605
Name
(RefSeq) trafficking protein particle complex subunit 8-like isoform X1
KO
K20305
trafficking protein particle complex subunit 8
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112250025
Membrane trafficking [BR:
otw04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
112250025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
TRAPPC9-Trs120
SNAP
Motif
Other DBs
NCBI-GeneID:
112250025
NCBI-ProteinID:
XP_024275607
LinkDB
All DBs
Position
LG01:complement(36037474..36117305)
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AA seq
1517 aa
AA seq
DB search
MAQCVQSVQEFIQDSFVPMVAVLCSEDAEKVTRKNNLNFSELLRPFCRLTSEGHMRDPSN
QLQVVKNLRISVNNVVTRPTVPSSGVPGHAHRRLLSEVVLTCQPAEGGVANVITAGDYDL
NISDRSLKASVPWYSDWRDTLTELSTSKHYTATTPWFEAYRESFLQSMPASDHEFLNHYL
ACLLVVSSSEAVPVEKFLKLSQEQHRIQHSGEYTNPKWFIPNTLKYYVLLHDMSQGDEQR
ADSVYEDMKQRYGAQGCYLLKVNSRTAAAGADEQIPDPWSQYLHKSSLQSQDQYEDPAPV
VVNNTAVENNVGGTSEVDGHDSEEKDGVLVNSLDNTHPLQLDTPSDTPGSLDALRAVAVE
TKPPPLATGVAAATSHGACLTLNDHDRIRLFIQEFTFRGLLPHIEKNIRQLNDQLVSRKG
LSRSLFSATKKWFGGGKVPEKSIAELKNTSGLLYPPEAPELQIRKMADLCFLVQLYDLAY
SCYHTAKKDFLSDQAMLYAAGALEMAAVSAFLQVGAPRPYPAHYMDTAIQTYRDVSKNMV
LAERCALLSAEVLKSQAKYSDAATLLIKMTSEDSDLRSALLLEQAAHCFINMRNPMVRKF
AFHMILAGHRFSKAGQKRHALRCYCQAMQVYKGKGWSLAEDHINFTIGRQSFTLRQPENA
VTAFRHILTNDSQQTSTQQGAFLREYLYVYKNVTGACEVALPQLPLPCINSSATRVYFGH
ERRLAEGEKQAATHVSLDQEFDRDLAAMWQDLEEQVVAAAKRGVVPATFQSTQCCLNSQT
DNLRFPLAVVEEPIIVEVVFRNPLKVPLVLSDLSLLWKFTLKDFNRPQEDSVGDAVPISN
EKEASVPRTSQKDDVIATEVIPEFYLSPEETKLARLKLLPHQTGQLNILGLVYNLASTSS
TGDTINSTAASQTEAPSAAEGTSVRGRQDLEIQGPRLNQTKEEKTSVSHGPDRRLDPTIT
PPMPLLEVFFLQFPTALLCGEIRKAYVEFCNMSRVTLCGLRVASTHPDFFTFGSSSLATP
LTPLSPTSFENCSAYKTLATPPGATPGSVAAVTLVSEGDFGSGTGLRGGGVSGAVTGGKG
ITEIPLGEGTLKPGESTQLPMWLRGPDQEGVHEIHFLFYYESAEKGGKISHRVLRHTVFI
CASRSLSVRATACRSNTLPEEEEEEEEERNGSMLVFVDVENINSSEAGVREFHIAQVSSS
SKQWRLHKCINPAEDKDCKLTSRERGKLCFRATRCKPLQVTLKAAEKYTFADLSLGNELI
ITSTTPCADFFFRRCQPLDSLRPPVAMETQGRHSRSQGVGHGGGDKDIAGVVRKCNEVDL
DIIILWKAFVVEDNKQVILEGQLHVALQTIDKEACSLTQKEEAQEMVLLKFKPELPPPMT
RPSMEQLSHLIKTNLQYPESYSHPFNQKSLCMVPVTLTLSNCSLAQVDVIIDLRHKTTSP
ESLEVHGSFTWLGQTQFKMQLGAQEVMRVQLRACFLHAGVYNLGTPRVFAKLADQGAMCE
TSQQTATPALIIIINST
NT seq
4554 nt
NT seq
+upstream
nt +downstream
nt
atggctcagtgcgtacagtcggtgcaggaattcatccaggactcgtttgtcccgatggtg
gcggtcctgtgcagcgaagatgcggagaaagtgactcgtaaaaacaacctgaatttctcg
gagctgctaaggcccttctgccggttaacatccgaaggtcacatgagggaccccagcaac
cagctgcaggtggtgaagaaccttcgcatcagtgtcaacaacgtggtgacacgccctact
gtcccttcctccggcgtccctggccatgcccaccgacggctgctcagcgaggtggtgttg
acatgccaaccggctgagggtggtgttgccaatgtcattactgctggtgactatgatctc
aatattagtgatcgctctcttaaagctagcgtcccctggtacagtgactggagggacaca
ctaacggaactcagcacctccaagcactacacagccacgactccctggtttgaggcgtac
agagagagcttcctccagtccatgcctgcctccgaccatgagttcctcaaccactacctc
gcctgtctgttggtggtgtcgtccagtgaggctgtaccagtggagaagttcctcaagctg
tctcaggagcagcacaggatccagcacagcggcgagtacaccaaccccaagtggttcatc
cccaacacactcaagtactacgtcctactgcacgacatgagccagggagacgaacagagg
gctgactctgtgtatgaggatatgaagcagaggtatggtgctcagggttgttacctgttg
aaggtcaactctcgtacggcggcagcgggagcagacgaacagatcccagacccatggagc
cagtaccttcacaagagtagcctgcaaagccaggatcagtatgaggatccagcccctgta
gtggtgaacaacacggctgtagagaacaacgtaggaggaacatccgaggtggatggacat
gactcggaagagaaagatggagtcttggtcaacagtctggacaacacccatcccctccag
ctggatacacccagtgacacgcccggtagcctcgacgctctcagggccgtcgccgtggaa
accaagccaccgcccctcgccacgggagtggcagcggccaccagccatggggcgtgcctc
acgctgaacgaccacgaccgcatcagactgttcatccaggagtttaccttcaggggacta
ctgcctcacatagagaagaacatcagacagctcaatgaccagctggtctccaggaaaggc
ttgagtcgctctcttttctctgccactaagaagtggtttggaggagggaaagttccagag
aagagtatcgctgaactgaagaacacttctggcctcctctatcccccagaagcccctgag
ctgcagatcaggaagatggctgacctttgtttcctggttcagctctatgacctggcgtac
agctgctaccacacggccaagaaggatttcctctctgaccaggccatgctctatgccgct
ggggcactggagatggcagcagtgtctgcatttcttcaagttggagctccaaggccgtat
ccagcacactacatggacacggcaatacagacctacagagatgtgtccaagaacatggtt
ctagctgaacgttgtgctctgctcagtgctgaggtactgaagagtcaggccaagtactct
gatgctgctaccctcctcatcaagatgaccagtgaggactctgacctgcgttctgccctc
ctattggagcaggcagcccactgtttcattaacatgcggaaccccatggtcaggaagttt
gccttccacatgatcctggcaggacaccgcttcagcaaggcagggcagaagcgccatgcg
ttgcggtgttactgccaggccatgcaggtgtataagggtaaaggctggtccctggctgag
gaccatatcaacttcactattggccgccagtccttcaccctgcgccaaccagagaacgct
gtcacagctttcagacacatcctcaccaatgacagccagcagacctccacacagcaggga
gccttcctccgggaatacctctatgtctacaagaatgttacgggggcatgtgaggtggcg
ctaccccagctgcccctaccctgcatcaacagctctgccaccagggtctacttcggccat
gaacgccgcctggcagagggtgagaagcaggcagccacccacgtgtccttggaccaggag
tttgaccgggacctagctgccatgtggcaggacctcgaggaacaggtggttgccgccgca
aaacgtggggtcgttccggcaacgtttcaatccacccagtgctgcctgaacagtcagacg
gacaacctccgcttcccgcttgctgttgtggaggaacccatcatagttgaggtggtgttc
cggaaccctctaaaggttccactggttctctctgacctctcgctgctctggaagtttaca
ctcaaagacttcaatcgaccacaggaagactcggtcggagatgctgtgcccatcagcaac
gagaaggaggccagcgttcccaggacttcacagaaagatgatgtcattgccacagaagtc
atcccagagttctacctgagccctgaggagactaaattggctcgtctgaagctgctgccc
caccagacaggtcagctcaacatcctgggtctagtctataatctggcctccacctcctct
actggagacactatcaacagcaccgcagcctcacagaccgaagctccctcagcggcagag
gggacatcagttcgtggtcgacaggacctagagatccagggaccgcggttgaaccagacc
aaagaggagaagacctcagtcagccacggtcctgaccgacgtcttgaccccaccatcacc
cctcccatgcccctgctagaggtattcttcctccagttccctactgccctgctatgtggt
gagatcaggaaggcttacgtggagttctgtaacatgagtcgcgttaccctgtgtggcctg
cgggtggcgtccacgcacccagacttctttacctttggaagctcctccttagccacacct
ctcacccccctcagccccacctcttttgaaaattgctctgcctacaagaccctggccaca
ccccctggcgccacgcccgggtctgttgctgcggtgacactggtttcagagggggacttt
gggtcagggacagggttgaggggaggaggagtgtccggtgcggttacggggggtaaaggg
ataacggagatccctctaggagaggggacactaaagcctggagaatctacccagctgccc
atgtggctgagaggaccggaccaggaaggagtccacgagatccacttcctgttctactac
gagagcgccgagaagggaggcaagatcagtcacagggttttgcgtcacacggtatttatt
tgtgcgagtcgttcgctgtctgttcgggccacagcttgtcgtagtaacacactacctgag
gaggaggaggaggaggaggaggagaggaacggcagcatgctggtctttgttgatgtggag
aacatcaactcgagcgaggctggcgtgcgtgagtttcacattgcacaggtctctagcagc
agtaaacagtggagactacacaagtgtataaacccagcagaagacaaagactgcaaactc
accagcagagagagaggaaagctgtgcttcagagcaacacgatgcaaacccctgcaagtt
accttgaaggcagcagagaaatacacatttgcagacctgagccttgggaatgaactgatc
atcacctctaccactccatgtgcagatttcttcttccggaggtgtcagcccttggactct
ctgagacctcccgttgccatggagacacaggggagacattccaggagtcagggggtgggg
catgggggcggggacaaggatatagcgggcgtggtcaggaagtgtaacgaggtggacctc
gacatcatcatcctctggaaggcatttgttgttgaggacaacaagcaggtgatcctagag
ggacagcttcatgtggccctacagaccatcgacaaagaggcctgctctttgacacagaaa
gaggaggctcaggagatggtgctgctgaagtttaaaccggagctgccgcctccaatgaca
cggccctctatggaacaactctcccacctcatcaagaccaacctgcagtacccagagagc
tacagccaccccttcaatcagaagagtctgtgtatggttccagtcactttgactctgtct
aactgctccctggctcaagttgatgtcatcattgacctacgccacaaaactacaagccct
gagtctctcgaggtgcatggttcgtttacatggctgggccagacacaattcaaaatgcag
ttgggggcacaagaagtgatgcgagtgcagctgcgagcctgcttcctgcatgcgggcgtc
tataatctgggaacgccacgggtctttgccaaactggcggaccagggagccatgtgtgag
accagccagcagacggccacgccagcactcatcatcatcatcaacagcacctga
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